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The map label for this gene is yfhM [H]

Identifier: 116624282

GI number: 116624282

Start: 6526573

End: 6527592

Strand: Reverse

Name: yfhM [H]

Synonym: Acid_5200

Alternate gene names: 116624282

Gene position: 6527592-6526573 (Counterclockwise)

Preceding gene: 116624288

Following gene: 116624281

Centisome position: 65.5

GC content: 61.08

Gene sequence:

>1020_bases
ATGCCTGAACCACCCAGTAATAGCCGCCGCGGGTTTTTGCGTACCGCGGCCGTGTCTTTCGGCGCACTCGGCTCCGCGGG
CGCCCAGGCCCGCCGGACGCTCTCGCCGGTGACGCCCGGGACGAACACCACCCTCGGTGCGATCAAGCAGGTGGACGCCG
GCCTGCTGAATGTCGGATACGCGGAGTCGGGGCCCGCGGGCGGACCCGCGGTGGTTCTTCTCCACGGCTGGCCATACGAC
ATTCACAGCTATGTCGATGTTGCGCCCATGCTGACGTCGGACGGCTACCGGGTCATCGTTCCATATCTGCGAGGCTACGG
TTCTACCAGATTCCAGCACAACGACACGTTTCGCAATGGGCAGCAAGCGGCGGTGGCTCAGGACATCGTCGCGCTGATGG
ACGCGCTGGGGATTGAAAAGGCGATCGTGGGCGGATTTGACTGGGGCTCGCGAACGGCCGCCATCATGGCGGCGCTCTGG
CCGGAACGCTGCAAGGCGATTGTCGCGGTGAGCGGATACTTGATTACGAACCTGAAAGCGAACCTACAGCCGCTGCCGCC
GCAAGCGGAATTGGGCTGGTGGTATCAGTATTATTTCGCCACCGAACGAGGCAAACTCGGCTACAGCCAAAATCGCGACG
AATTCAACAAGCTGATCTGGAAACTCGCTTCGCCGAAGTGGAATTTTGACGAGGCCACTTTCAACCGCACCGCGGCCGCG
TTCCGTAATCCGGATCACGTCAGTATCGTGATTCATAACTATCGCTGGCGGTTGAGCCTGGCAGCGGGCGAACCGCGATA
CGATGCCCTCGAACAGAAGCTCTTCCAAGGCCCGCTGATTTCCGTGCCGGCGATTACGATCGCTAGTGATTTCGACGGCG
CCGCCGCGGATGGCGCGGCTTACGCGAAGAAGTTCGCCGGAAAATATCTCCATCGAATTCTCAAGGGCGTCGGTCATAAC
GTGCCGCAAGAAGCGCCGCAGGCTTTTGCCCAGGCGGTGATCGACGTCGATAGTTTCTGA

Upstream 100 bases:

>100_bases
ATCACCTTTTTTGGCATTTCCAGCCAAATACAGCATCTCGTGAGGCGTGCGCTCTGGTCATCGCCGCAGATGATAATGAA
CAGGGAAGCGAAGAAGCCAC

Downstream 100 bases:

>100_bases
GTCTCTGTCTATGCCGTAAATGAGGGCTAGGAGATTACTTACAATGAGCATCAACGACCTGAAGTTCGAGGCGGTGGTCA
TCCCCGTCTCGGATGTCGAT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPEPPSNSRRGFLRTAAVSFGALGSAGAQARRTLSPVTPGTNTTLGAIKQVDAGLLNVGYAESGPAGGPAVVLLHGWPYD
IHSYVDVAPMLTSDGYRVIVPYLRGYGSTRFQHNDTFRNGQQAAVAQDIVALMDALGIEKAIVGGFDWGSRTAAIMAALW
PERCKAIVAVSGYLITNLKANLQPLPPQAELGWWYQYYFATERGKLGYSQNRDEFNKLIWKLASPKWNFDEATFNRTAAA
FRNPDHVSIVIHNYRWRLSLAAGEPRYDALEQKLFQGPLISVPAITIASDFDGAAADGAAYAKKFAGKYLHRILKGVGHN
VPQEAPQAFAQAVIDVDSF

Sequences:

>Translated_339_residues
MPEPPSNSRRGFLRTAAVSFGALGSAGAQARRTLSPVTPGTNTTLGAIKQVDAGLLNVGYAESGPAGGPAVVLLHGWPYD
IHSYVDVAPMLTSDGYRVIVPYLRGYGSTRFQHNDTFRNGQQAAVAQDIVALMDALGIEKAIVGGFDWGSRTAAIMAALW
PERCKAIVAVSGYLITNLKANLQPLPPQAELGWWYQYYFATERGKLGYSQNRDEFNKLIWKLASPKWNFDEATFNRTAAA
FRNPDHVSIVIHNYRWRLSLAAGEPRYDALEQKLFQGPLISVPAITIASDFDGAAADGAAYAKKFAGKYLHRILKGVGHN
VPQEAPQAFAQAVIDVDSF
>Mature_338_residues
PEPPSNSRRGFLRTAAVSFGALGSAGAQARRTLSPVTPGTNTTLGAIKQVDAGLLNVGYAESGPAGGPAVVLLHGWPYDI
HSYVDVAPMLTSDGYRVIVPYLRGYGSTRFQHNDTFRNGQQAAVAQDIVALMDALGIEKAIVGGFDWGSRTAAIMAALWP
ERCKAIVAVSGYLITNLKANLQPLPPQAELGWWYQYYFATERGKLGYSQNRDEFNKLIWKLASPKWNFDEATFNRTAAAF
RNPDHVSIVIHNYRWRLSLAAGEPRYDALEQKLFQGPLISVPAITIASDFDGAAADGAAYAKKFAGKYLHRILKGVGHNV
PQEAPQAFAQAVIDVDSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI27597073, Length=134, Percent_Identity=31.3432835820896, Blast_Score=69, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6324392, Length=123, Percent_Identity=34.1463414634146, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 36858; Mature: 36727

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPPSNSRRGFLRTAAVSFGALGSAGAQARRTLSPVTPGTNTTLGAIKQVDAGLLNVGY
CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCC
AESGPAGGPAVVLLHGWPYDIHSYVDVAPMLTSDGYRVIVPYLRGYGSTRFQHNDTFRNG
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCEECCCCCCCC
QQAAVAQDIVALMDALGIEKAIVGGFDWGSRTAAIMAALWPERCKAIVAVSGYLITNLKA
CHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHCHHHHHEEHEECCCCEECCCC
NLQPLPPQAELGWWYQYYFATERGKLGYSQNRDEFNKLIWKLASPKWNFDEATFNRTAAA
CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FRNPDHVSIVIHNYRWRLSLAAGEPRYDALEQKLFQGPLISVPAITIASDFDGAAADGAA
HCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEECCEEEEECCCCCCCCCHHH
YAKKFAGKYLHRILKGVGHNVPQEAPQAFAQAVIDVDSF
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEPPSNSRRGFLRTAAVSFGALGSAGAQARRTLSPVTPGTNTTLGAIKQVDAGLLNVGY
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCC
AESGPAGGPAVVLLHGWPYDIHSYVDVAPMLTSDGYRVIVPYLRGYGSTRFQHNDTFRNG
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCEECCCCCCCC
QQAAVAQDIVALMDALGIEKAIVGGFDWGSRTAAIMAALWPERCKAIVAVSGYLITNLKA
CHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHCHHHHHEEHEECCCCEECCCC
NLQPLPPQAELGWWYQYYFATERGKLGYSQNRDEFNKLIWKLASPKWNFDEATFNRTAAA
CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FRNPDHVSIVIHNYRWRLSLAAGEPRYDALEQKLFQGPLISVPAITIASDFDGAAADGAA
HCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEECCEEEEECCCCCCCCCHHH
YAKKFAGKYLHRILKGVGHNVPQEAPQAFAQAVIDVDSF
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]