Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116624222
Identifier: 116624222
GI number: 116624222
Start: 6458931
End: 6460151
Strand: Reverse
Name: 116624222
Synonym: Acid_5138
Alternate gene names: NA
Gene position: 6460151-6458931 (Counterclockwise)
Preceding gene: 116624223
Following gene: 116624220
Centisome position: 64.82
GC content: 62.49
Gene sequence:
>1221_bases TTGGCCAACATATTTCCCTTCCAACCCTACCGGTACGCTTCCAGCGCCGGCGAGCTTCAAAACCTTGTCACCCAGCCTTA CGACAAGATCTCGCCGGCGATGCAAGCCAAGTACCTTGCCGCCAGCCCCTACAACCTGGTGCGCGTGATTCTGGGCGAAC GCAAGCCCGCCGATAACGACAGCGAAAACGTCTATACGCGGGCGACACGCGCGATGGACGAATGGATCGCCTCCGGGGTG TGGGCGCGCGATGCCGAACCCGGCATGTTCGCGTACTTCCAGGAGTTCGTGGTGCCCGACACCGGCGAGCGGCTCAACCG AAAAGGCTTTATCGCGCTCGGGCAGGTAGAGGATTACACAAAGGGCATCGTGTTCCGCCACGAGCAGACCCTCTCCGGTC CCAAGAAGGACCGCATGGAGCTGCTCAAGCACACGCGCACACACTTCGAACCGATCTTCATGCTGTACCCGGATCCCGCG GGCGCAATCGACGCACTGCTGGATGAAGCCGCGGCGGCTCCGCCGATCGCGCAGGTGACCGACGAGTACGGCGCCATTCA TCGCATGTGGAAGGTGGGAAACCCGGCGCGCATTCAAGAACTGATGGCGGACAAGAAGCTGCTGATCGCCGACGGCCACC ACCGCTATGAGACCGCCATGGCCTTTCAGCGCGACCATCCGGAGCTTGCCGGCGCGAATCGCATGATGATGGCCTTCGTC AATATGCACTCGGCCGGATTGAAGATCCTGGCGACGCACCGGCTGGTCAGCGGGATCGATGCCGCCGGATTCCTGAAGGC GGCCGCGGCCGATTTCGAGATCACCGAGATCGGCTCGCTCGACACATTGAAGCGGGCTTGGGCCGCGGGCGGCGATCGGA GCATCATCGGCGCCGCGATGGGCGATAAGCTTTACATGTTGGAAGACCGCTCAGCGCGGGGCGCGCTCGACGTGCGCATT CTGCACGAGCGTCTGCTGGGCAAAGCGCTCGGCATCAGCGAAGAAGCGGTGCGCAATGAGCAGCACCTCCGTTATGTCCG CGGGATCGATGCCGCGGTGGAAGAGGTGCGCAAGGGCGCGGCGCAGATTGCGTTCCTGCTCAAACCGACCTCGGTGGAAC AGGTTGCCGACACCAGTTTCGGCGGTCGCGTGATGCCGCAGAAATCGACCGATTTCTACCCCAAGCTGCTATCCGGCATG GTGATGTACAAGCTGGATTAG
Upstream 100 bases:
>100_bases ATATCGGCGAGGCGCAACGCGGCATCGTGACCCGCGAACCGGACCTCATTCCCGCCGTCGGCATCGTCCGCTAGGCGGCG GGTCCTGATAAAATCGGGGG
Downstream 100 bases:
>100_bases CGAATTAGCAACGCTTGCTTAATGCTCGCGGCTCGGAACGGAGCTGCGAGCGTGAGCAGCGGTTGCTCGCTAAAAGCGCG TCAGGCCGCGCGCCTTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MANIFPFQPYRYASSAGELQNLVTQPYDKISPAMQAKYLAASPYNLVRVILGERKPADNDSENVYTRATRAMDEWIASGV WARDAEPGMFAYFQEFVVPDTGERLNRKGFIALGQVEDYTKGIVFRHEQTLSGPKKDRMELLKHTRTHFEPIFMLYPDPA GAIDALLDEAAAAPPIAQVTDEYGAIHRMWKVGNPARIQELMADKKLLIADGHHRYETAMAFQRDHPELAGANRMMMAFV NMHSAGLKILATHRLVSGIDAAGFLKAAAADFEITEIGSLDTLKRAWAAGGDRSIIGAAMGDKLYMLEDRSARGALDVRI LHERLLGKALGISEEAVRNEQHLRYVRGIDAAVEEVRKGAAQIAFLLKPTSVEQVADTSFGGRVMPQKSTDFYPKLLSGM VMYKLD
Sequences:
>Translated_406_residues MANIFPFQPYRYASSAGELQNLVTQPYDKISPAMQAKYLAASPYNLVRVILGERKPADNDSENVYTRATRAMDEWIASGV WARDAEPGMFAYFQEFVVPDTGERLNRKGFIALGQVEDYTKGIVFRHEQTLSGPKKDRMELLKHTRTHFEPIFMLYPDPA GAIDALLDEAAAAPPIAQVTDEYGAIHRMWKVGNPARIQELMADKKLLIADGHHRYETAMAFQRDHPELAGANRMMMAFV NMHSAGLKILATHRLVSGIDAAGFLKAAAADFEITEIGSLDTLKRAWAAGGDRSIIGAAMGDKLYMLEDRSARGALDVRI LHERLLGKALGISEEAVRNEQHLRYVRGIDAAVEEVRKGAAQIAFLLKPTSVEQVADTSFGGRVMPQKSTDFYPKLLSGM VMYKLD >Mature_405_residues ANIFPFQPYRYASSAGELQNLVTQPYDKISPAMQAKYLAASPYNLVRVILGERKPADNDSENVYTRATRAMDEWIASGVW ARDAEPGMFAYFQEFVVPDTGERLNRKGFIALGQVEDYTKGIVFRHEQTLSGPKKDRMELLKHTRTHFEPIFMLYPDPAG AIDALLDEAAAAPPIAQVTDEYGAIHRMWKVGNPARIQELMADKKLLIADGHHRYETAMAFQRDHPELAGANRMMMAFVN MHSAGLKILATHRLVSGIDAAGFLKAAAADFEITEIGSLDTLKRAWAAGGDRSIIGAAMGDKLYMLEDRSARGALDVRIL HERLLGKALGISEEAVRNEQHLRYVRGIDAAVEEVRKGAAQIAFLLKPTSVEQVADTSFGGRVMPQKSTDFYPKLLSGMV MYKLD
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45093; Mature: 44962
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIFPFQPYRYASSAGELQNLVTQPYDKISPAMQAKYLAASPYNLVRVILGERKPADND CCCCCCCCCCHHHCCHHHHHHHHHCCHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCC SENVYTRATRAMDEWIASGVWARDAEPGMFAYFQEFVVPDTGERLNRKGFIALGQVEDYT CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCEEECCCHHHH KGIVFRHEQTLSGPKKDRMELLKHTRTHFEPIFMLYPDPAGAIDALLDEAAAAPPIAQVT CCEEEEEHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHH DEYGAIHRMWKVGNPARIQELMADKKLLIADGHHRYETAMAFQRDHPELAGANRMMMAFV HHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHH NMHSAGLKILATHRLVSGIDAAGFLKAAAADFEITEIGSLDTLKRAWAAGGDRSIIGAAM HHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCCCEEEHHC GDKLYMLEDRSARGALDVRILHERLLGKALGISEEAVRNEQHLRYVRGIDAAVEEVRKGA CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH AQIAFLLKPTSVEQVADTSFGGRVMPQKSTDFYPKLLSGMVMYKLD HHEEEEECCCCHHHHHCCCCCCEECCCCCCCHHHHHHCCEEEEEEC >Mature Secondary Structure ANIFPFQPYRYASSAGELQNLVTQPYDKISPAMQAKYLAASPYNLVRVILGERKPADND CCCCCCCCCHHHCCHHHHHHHHHCCHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCC SENVYTRATRAMDEWIASGVWARDAEPGMFAYFQEFVVPDTGERLNRKGFIALGQVEDYT CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCEEECCCHHHH KGIVFRHEQTLSGPKKDRMELLKHTRTHFEPIFMLYPDPAGAIDALLDEAAAAPPIAQVT CCEEEEEHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHH DEYGAIHRMWKVGNPARIQELMADKKLLIADGHHRYETAMAFQRDHPELAGANRMMMAFV HHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHH NMHSAGLKILATHRLVSGIDAAGFLKAAAADFEITEIGSLDTLKRAWAAGGDRSIIGAAM HHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCCCEEEHHC GDKLYMLEDRSARGALDVRILHERLLGKALGISEEAVRNEQHLRYVRGIDAAVEEVRKGA CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH AQIAFLLKPTSVEQVADTSFGGRVMPQKSTDFYPKLLSGMVMYKLD HHEEEEECCCCHHHHHCCCCCCEECCCCCCCHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA