Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116624213
Identifier: 116624213
GI number: 116624213
Start: 6451522
End: 6453459
Strand: Reverse
Name: 116624213
Synonym: Acid_5129
Alternate gene names: NA
Gene position: 6453459-6451522 (Counterclockwise)
Preceding gene: 116624214
Following gene: 116624212
Centisome position: 64.76
GC content: 64.24
Gene sequence:
>1938_bases TTGACCGGCCCATTTAAGATCGCGCGATCGCTTTGGGCGCCATTGTTGTTTGCCGGGATCGTGCTCGCGCTGAACCCGCA CTGGTTTCAAGCGCCGATTGTGGAAACCAGCGATTTCGCAGCGAACTCGCTGCAGGTCTATCGCGCGAAGATCTTCCACG AGATGCTGGGGAACTACTCGCGGTGGGAGTTCCACCATCCGGGTCCGGCGATCTTCTATGTGCTGGCGGCGGGGGAGCGC GTATTTCACGACTGGACACACCTGGTCCCAGGGACAATGAACGCGCAACTGGTGACGCTGGTGCTGATCAACACAGCTTT TCTGTTTGGCGCGATCGAGATCTTCGCGGGATATTTTACGTCGCAGATGTTCCGGCCGGCGGCCTTCGCGGCGGCGCTCT TGTGGATCTACATGGTGAATGTCACGGTGGCAACGGGAGCGGTAGTGTCGCCGTGGATGCCGCACGTGGCGTTGTTTGCG TTTCTGTTTTTCGCGGCGGCCTGCGCGTCGGTGGCGGCCGGCAGAATCTCGCACCTGCCCTGGATGGCCCTGGGTGCGAT GCTGATGGTGCACCTGCACGTGGCGCAGTTTCTATTTGCCGGCGTGCTCGCGGCAGCGGCATGCATGGTGGCGGCGGTGG GCGAATGGCGGGCCGGAAGGCTTTCGCGGCATGGGAAGGCGGCGGCTGCGAGCGCGGGAATCGTGGCGCTGTTTCTGCTG CCGATGGTGCTGGAACTGGCGGTGCACCGGCCGAACAACCTGGACGACATCCGCGCGTACCTGGCGAGGTACCCGGATCC GAATCGCGGTATCGGGAATGCGGTGCGGTACTTCGTGAGCTTCCTGGCGTTCGAGCCGGATGCGGTGCAGGCGCAAATCG GCGGAGCAAGTGTACCGATGCGCCTGGGCTCGACGCCGATAATTTATTGGGCTATTTATCTGGCCGCGCTCGGCAGCGCA GTGTGGGTCGCGGTGCGGCGGCCGAAGACTGTGCCGCGCCTGGTGTGGATTGTGATCGGGGAATGCGTATTGATCAGCCT GCTGTTTCTCTATTGGGCCGACCGGATCACCGGCGCCTTCTACAACTTCAATGGATTTTTTGTCTACACCATCCAACTGC TGGGGCTGTGGTCGATTGCGGGCGTGCTTTCGCAGGCGTGGAACGCGAAGTGGGCGCGGGCTGCGTGGGTGGTGCCGTTC GCGGCAATGCCGCTGATGGCGACGGAACTGCGCAATCCGGACCGCGGGTCGGACGCGATCGCGCGGATGAGCGAAGCATT GGCGAGTTCCGGGCCGGTGCATCTGGTATTCGAGCATGACGACTGGGATACGGCGGCGGGGGTCGCCAACCAGCTGGCGC GCCGCGGGCAGGCCGTCTGCGTGGACGCGGGTTGGTTCTTTCTGTTCGGGCGCGAGGCGGTGTGCCGGCCGGGAACCGAA TTCGGCCGGCGGGTGGTGACGGCTGACGGAATTTTCGAACCTGGACGGCGGCCGCTGGTGCTGCCGTTGAGGATCGGAAT AGACGAGGCGAGCGCATTGCGGGAGGGTTTTCATGCCCCTGAGCGCGACCACCGCTGGACGGGACGCAGCGCGTCGCTCG GGTTCACGTTGGCCGCCGGAGCGCCGCAGTACCGGCTGACTATCACGGGGTCGGTGCTGCCGGAGCGTCCGGTGGAGGTG GCGCTGAATGGTGTGCGACTGGGTGTGCTAGACGGACTGTGGAAGTCGAGCCAGAGTTTCGACGTGCCCGGGAATGCGAT GAAGGCGGGGGAGATGAACAGGCTGACCTTCGAGTGCGCGCGGGCGGCGCCGATTGCCGGGGACGCAAGGGAACTCGGGT TCTCGTTGATGACGGTGGAGCTTCACCGAGGCTTGAACGCACCCATGCAGAGTGATAGGCTCGTGCGGGCGCCAGGAGGT GGGTACCGTGCTCGATAA
Upstream 100 bases:
>100_bases ACGATCCCGCGCGGTTTGTGGATCCGGCCGGATACCAGAAGGCGGTAGCGGGCGCGGAGGCGGCGTACCGGAAACAACTG GCGGAGGAAAAGGCGGCGCA
Downstream 100 bases:
>100_bases AGTCGATACGCTGATTGCCTTTGCGGTAATAATGCTGGGAGTCAGCCTGATCATCACGATCCTCACGCAGATGGCCGCGG GTTTTCTGGCCCTCCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MTGPFKIARSLWAPLLFAGIVLALNPHWFQAPIVETSDFAANSLQVYRAKIFHEMLGNYSRWEFHHPGPAIFYVLAAGER VFHDWTHLVPGTMNAQLVTLVLINTAFLFGAIEIFAGYFTSQMFRPAAFAAALLWIYMVNVTVATGAVVSPWMPHVALFA FLFFAAACASVAAGRISHLPWMALGAMLMVHLHVAQFLFAGVLAAAACMVAAVGEWRAGRLSRHGKAAAASAGIVALFLL PMVLELAVHRPNNLDDIRAYLARYPDPNRGIGNAVRYFVSFLAFEPDAVQAQIGGASVPMRLGSTPIIYWAIYLAALGSA VWVAVRRPKTVPRLVWIVIGECVLISLLFLYWADRITGAFYNFNGFFVYTIQLLGLWSIAGVLSQAWNAKWARAAWVVPF AAMPLMATELRNPDRGSDAIARMSEALASSGPVHLVFEHDDWDTAAGVANQLARRGQAVCVDAGWFFLFGREAVCRPGTE FGRRVVTADGIFEPGRRPLVLPLRIGIDEASALREGFHAPERDHRWTGRSASLGFTLAAGAPQYRLTITGSVLPERPVEV ALNGVRLGVLDGLWKSSQSFDVPGNAMKAGEMNRLTFECARAAPIAGDARELGFSLMTVELHRGLNAPMQSDRLVRAPGG GYRAR
Sequences:
>Translated_645_residues MTGPFKIARSLWAPLLFAGIVLALNPHWFQAPIVETSDFAANSLQVYRAKIFHEMLGNYSRWEFHHPGPAIFYVLAAGER VFHDWTHLVPGTMNAQLVTLVLINTAFLFGAIEIFAGYFTSQMFRPAAFAAALLWIYMVNVTVATGAVVSPWMPHVALFA FLFFAAACASVAAGRISHLPWMALGAMLMVHLHVAQFLFAGVLAAAACMVAAVGEWRAGRLSRHGKAAAASAGIVALFLL PMVLELAVHRPNNLDDIRAYLARYPDPNRGIGNAVRYFVSFLAFEPDAVQAQIGGASVPMRLGSTPIIYWAIYLAALGSA VWVAVRRPKTVPRLVWIVIGECVLISLLFLYWADRITGAFYNFNGFFVYTIQLLGLWSIAGVLSQAWNAKWARAAWVVPF AAMPLMATELRNPDRGSDAIARMSEALASSGPVHLVFEHDDWDTAAGVANQLARRGQAVCVDAGWFFLFGREAVCRPGTE FGRRVVTADGIFEPGRRPLVLPLRIGIDEASALREGFHAPERDHRWTGRSASLGFTLAAGAPQYRLTITGSVLPERPVEV ALNGVRLGVLDGLWKSSQSFDVPGNAMKAGEMNRLTFECARAAPIAGDARELGFSLMTVELHRGLNAPMQSDRLVRAPGG GYRAR >Mature_644_residues TGPFKIARSLWAPLLFAGIVLALNPHWFQAPIVETSDFAANSLQVYRAKIFHEMLGNYSRWEFHHPGPAIFYVLAAGERV FHDWTHLVPGTMNAQLVTLVLINTAFLFGAIEIFAGYFTSQMFRPAAFAAALLWIYMVNVTVATGAVVSPWMPHVALFAF LFFAAACASVAAGRISHLPWMALGAMLMVHLHVAQFLFAGVLAAAACMVAAVGEWRAGRLSRHGKAAAASAGIVALFLLP MVLELAVHRPNNLDDIRAYLARYPDPNRGIGNAVRYFVSFLAFEPDAVQAQIGGASVPMRLGSTPIIYWAIYLAALGSAV WVAVRRPKTVPRLVWIVIGECVLISLLFLYWADRITGAFYNFNGFFVYTIQLLGLWSIAGVLSQAWNAKWARAAWVVPFA AMPLMATELRNPDRGSDAIARMSEALASSGPVHLVFEHDDWDTAAGVANQLARRGQAVCVDAGWFFLFGREAVCRPGTEF GRRVVTADGIFEPGRRPLVLPLRIGIDEASALREGFHAPERDHRWTGRSASLGFTLAAGAPQYRLTITGSVLPERPVEVA LNGVRLGVLDGLWKSSQSFDVPGNAMKAGEMNRLTFECARAAPIAGDARELGFSLMTVELHRGLNAPMQSDRLVRAPGGG YRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70391; Mature: 70259
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPFKIARSLWAPLLFAGIVLALNPHWFQAPIVETSDFAANSLQVYRAKIFHEMLGNYS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC RWEFHHPGPAIFYVLAAGERVFHDWTHLVPGTMNAQLVTLVLINTAFLFGAIEIFAGYFT CEEEECCCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SQMFRPAAFAAALLWIYMVNVTVATGAVVSPWMPHVALFAFLFFAAACASVAAGRISHLP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH WMALGAMLMVHLHVAQFLFAGVLAAAACMVAAVGEWRAGRLSRHGKAAAASAGIVALFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHH PMVLELAVHRPNNLDDIRAYLARYPDPNRGIGNAVRYFVSFLAFEPDAVQAQIGGASVPM HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCCC RLGSTPIIYWAIYLAALGSAVWVAVRRPKTVPRLVWIVIGECVLISLLFLYWADRITGAF CCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE YNFNGFFVYTIQLLGLWSIAGVLSQAWNAKWARAAWVVPFAAMPLMATELRNPDRGSDAI ECCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ARMSEALASSGPVHLVFEHDDWDTAAGVANQLARRGQAVCVDAGWFFLFGREAVCRPGTE HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCEEEEECCHHHCCCCHH FGRRVVTADGIFEPGRRPLVLPLRIGIDEASALREGFHAPERDHRWTGRSASLGFTLAAG HCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC APQYRLTITGSVLPERPVEVALNGVRLGVLDGLWKSSQSFDVPGNAMKAGEMNRLTFECA CCEEEEEEECCCCCCCCHHHHHCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH RAAPIAGDARELGFSLMTVELHRGLNAPMQSDRLVRAPGGGYRAR HCCCCCCCHHHHCHHEEEEEHHCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure TGPFKIARSLWAPLLFAGIVLALNPHWFQAPIVETSDFAANSLQVYRAKIFHEMLGNYS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC RWEFHHPGPAIFYVLAAGERVFHDWTHLVPGTMNAQLVTLVLINTAFLFGAIEIFAGYFT CEEEECCCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SQMFRPAAFAAALLWIYMVNVTVATGAVVSPWMPHVALFAFLFFAAACASVAAGRISHLP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH WMALGAMLMVHLHVAQFLFAGVLAAAACMVAAVGEWRAGRLSRHGKAAAASAGIVALFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHH PMVLELAVHRPNNLDDIRAYLARYPDPNRGIGNAVRYFVSFLAFEPDAVQAQIGGASVPM HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCCC RLGSTPIIYWAIYLAALGSAVWVAVRRPKTVPRLVWIVIGECVLISLLFLYWADRITGAF CCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE YNFNGFFVYTIQLLGLWSIAGVLSQAWNAKWARAAWVVPFAAMPLMATELRNPDRGSDAI ECCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ARMSEALASSGPVHLVFEHDDWDTAAGVANQLARRGQAVCVDAGWFFLFGREAVCRPGTE HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCEEEEECCHHHCCCCHH FGRRVVTADGIFEPGRRPLVLPLRIGIDEASALREGFHAPERDHRWTGRSASLGFTLAAG HCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC APQYRLTITGSVLPERPVEVALNGVRLGVLDGLWKSSQSFDVPGNAMKAGEMNRLTFECA CCEEEEEEECCCCCCCCHHHHHCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH RAAPIAGDARELGFSLMTVELHRGLNAPMQSDRLVRAPGGGYRAR HCCCCCCCHHHHCHHEEEEEHHCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA