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The map label for this gene is rpmC

Identifier: 116624194

GI number: 116624194

Start: 6437118

End: 6437321

Strand: Reverse

Name: rpmC

Synonym: Acid_5110

Alternate gene names: 116624194

Gene position: 6437321-6437118 (Counterclockwise)

Preceding gene: 116624195

Following gene: 116624193

Centisome position: 64.6

GC content: 52.45

Gene sequence:

>204_bases
ATGAAGGCGCAGAACGTTCGCGATCTTGACGAGCACGAATTAAAGACGAAATTGAAGGAAATGGACGAGCAGATGTTTCG
TCTTCATTTTCAGATGTCGATGGGGCAGATGGACGGCCTGAAGAAGGTCCGCCAGATGAGAAAAGACCGGGCGCGTATGA
ACACCATCCTGCGCGAGCGGGAACTGGCGGGGGAGAAGAAGTAA

Upstream 100 bases:

>100_bases
GTGTGGATCGTCCCACGGCACTGGCTGCGATGCGGCTGGCGGCGCACAAACTGTCGATCAGAACGAAGTTTGTGGGCCGG
GAAGACTCGGAGTAACGGAT

Downstream 100 bases:

>100_bases
CATGGCCGAAACCGAAGCCAAAAAAGCGTTGAAGAACGAGAAGGTCGGCGAAGTAGTATCGACCAAGATGCAAAAGACGA
TCGTGGTCGAGGTCAGCCGG

Product: 50S ribosomal protein L29P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MKAQNVRDLDEHELKTKLKEMDEQMFRLHFQMSMGQMDGLKKVRQMRKDRARMNTILRERELAGEKK

Sequences:

>Translated_67_residues
MKAQNVRDLDEHELKTKLKEMDEQMFRLHFQMSMGQMDGLKKVRQMRKDRARMNTILRERELAGEKK
>Mature_67_residues
MKAQNVRDLDEHELKTKLKEMDEQMFRLHFQMSMGQMDGLKKVRQMRKDRARMNTILRERELAGEKK

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_SOLUE (Q01WA0)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_826350.1
- ProteinModelPortal:   Q01WA0
- SMR:   Q01WA0
- STRING:   Q01WA0
- GeneID:   4426666
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_5110
- NMPDR:   fig|234267.9.peg.4851
- eggNOG:   COG0255
- HOGENOM:   HBG730819
- OMA:   HARESEQ
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8165; Mature: 8165

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
11.9 %Met     (Translated Protein)
11.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
11.9 %Met     (Mature Protein)
11.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQNVRDLDEHELKTKLKEMDEQMFRLHFQMSMGQMDGLKKVRQMRKDRARMNTILRER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAGEKK
HHCCCCC
>Mature Secondary Structure
MKAQNVRDLDEHELKTKLKEMDEQMFRLHFQMSMGQMDGLKKVRQMRKDRARMNTILRER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAGEKK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA