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The map label for this gene is 116622968

Identifier: 116622968

GI number: 116622968

Start: 4905090

End: 4906121

Strand: Reverse

Name: 116622968

Synonym: Acid_3871

Alternate gene names: NA

Gene position: 4906121-4905090 (Counterclockwise)

Preceding gene: 116622969

Following gene: 116622967

Centisome position: 49.23

GC content: 60.85

Gene sequence:

>1032_bases
ATGTTGTATACCAGACGAGACATGGGCAAAGTCGCGCTCGCCGCGCTGCCGCTGGCGCGCGCAATCGGCGCGCCCAAGAT
AAACTCCAAGGTCGATGGCGTTCAAGTCGGCGCCATTACCTATAGTTTCGGCGGGATGAATCTCGACGATGTGATCAAGG
CCTACATGGACATCGGTCTCGGCGAAATGGAGCTGATGTCGAATACGGCGGAGACTGCCGCCGGAGCCCCCACGCCGCCG
CAGGGAGCGGGACGCGGACAGGGTCGCGGCCCCGGTGGACCCGGCGGTGGACAGGGACGCGGTCCCGGCGGAGCGGGACG
AGCTGCTGCGCCGCGCACTCCGCGCCCGCCAATGACGGAAGAGCAGATTGCCGCCGCCCGCGCCACGCCGCGTGCTCAGG
AATTGTTGAAGTGGCGCAAAGAGCTCTCGATGGACAAGTTTAAGGATGTCCGCAAGAAGGTGAACGACGCCGGCATCGAT
ATCGAGATCCTGTGCTTCAACATGAATGAGGCGATCACGGACGACGAGATCGATTACGCGTTCGTGATGGCCAAGACGCT
CGGCGCCAAGGCGATCTCCACCAGCACGCAAGTCACGGTCGCGAAGCGCGTGGCACCCTTCGCCGAAAAGCACAAGATGC
TCATCGGCTTCCACGGCCACGATAACGACGCCGATCCCAACGAAACCGGCTCGCTGGAAAGCTACGCGAAGGCCCTCTCC
TACGGCAAATTCAACGGCGTTAACCTGGACATCGGACATTTCACCGCGGCCAATTACGATGCCATCGCCTTCATCAAGGA
GAATCACGCGCGCATTACCAACCTGCACGTGAAAGATCGCAAGAAGGATCACGGTCCCAACGTGGTGTGGGGTGAAGGCG
ATACGCCGATCAAGCCCGTGCTGCAACTGGTCAAGAAAGAGAAGTACAAGTTCCCGGCGAATATCGAGCTCGAGTATCCC
GTGCCTGAAGGCTCCGATCGCGTTGCCGAGGTGAAGAAGTGCCTCGCCTATATGAAGCAGGCCCTCGCGTAG

Upstream 100 bases:

>100_bases
CTGACCACACGCAATCGGAAACTCTCGAAAGCTGGCTGCGACCCAGTAGACGCGAGTCGTGGTTCCGACTAGAATAGGCT
TTCTCTCACAGGGGGTATCA

Downstream 100 bases:

>100_bases
AGATTAGCGGGGCGGGCGCTTCCGCCTGCCCCTACCCTTGCGCCCGTAGTTTCAATGGTGATACCAACAAGGAATCATGA
ATAATACCCGCAGAGAGTTG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; 16S RRNA-Processing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLYTRRDMGKVALAALPLARAIGAPKINSKVDGVQVGAITYSFGGMNLDDVIKAYMDIGLGEMELMSNTAETAAGAPTPP
QGAGRGQGRGPGGPGGGQGRGPGGAGRAAAPRTPRPPMTEEQIAAARATPRAQELLKWRKELSMDKFKDVRKKVNDAGID
IEILCFNMNEAITDDEIDYAFVMAKTLGAKAISTSTQVTVAKRVAPFAEKHKMLIGFHGHDNDADPNETGSLESYAKALS
YGKFNGVNLDIGHFTAANYDAIAFIKENHARITNLHVKDRKKDHGPNVVWGEGDTPIKPVLQLVKKEKYKFPANIELEYP
VPEGSDRVAEVKKCLAYMKQALA

Sequences:

>Translated_343_residues
MLYTRRDMGKVALAALPLARAIGAPKINSKVDGVQVGAITYSFGGMNLDDVIKAYMDIGLGEMELMSNTAETAAGAPTPP
QGAGRGQGRGPGGPGGGQGRGPGGAGRAAAPRTPRPPMTEEQIAAARATPRAQELLKWRKELSMDKFKDVRKKVNDAGID
IEILCFNMNEAITDDEIDYAFVMAKTLGAKAISTSTQVTVAKRVAPFAEKHKMLIGFHGHDNDADPNETGSLESYAKALS
YGKFNGVNLDIGHFTAANYDAIAFIKENHARITNLHVKDRKKDHGPNVVWGEGDTPIKPVLQLVKKEKYKFPANIELEYP
VPEGSDRVAEVKKCLAYMKQALA
>Mature_343_residues
MLYTRRDMGKVALAALPLARAIGAPKINSKVDGVQVGAITYSFGGMNLDDVIKAYMDIGLGEMELMSNTAETAAGAPTPP
QGAGRGQGRGPGGPGGGQGRGPGGAGRAAAPRTPRPPMTEEQIAAARATPRAQELLKWRKELSMDKFKDVRKKVNDAGID
IEILCFNMNEAITDDEIDYAFVMAKTLGAKAISTSTQVTVAKRVAPFAEKHKMLIGFHGHDNDADPNETGSLESYAKALS
YGKFNGVNLDIGHFTAANYDAIAFIKENHARITNLHVKDRKKDHGPNVVWGEGDTPIKPVLQLVKKEKYKFPANIELEYP
VPEGSDRVAEVKKCLAYMKQALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36904; Mature: 36904

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYTRRDMGKVALAALPLARAIGAPKINSKVDGVQVGAITYSFGGMNLDDVIKAYMDIGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCC
GEMELMSNTAETAAGAPTPPQGAGRGQGRGPGGPGGGQGRGPGGAGRAAAPRTPRPPMTE
CHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EQIAAARATPRAQELLKWRKELSMDKFKDVRKKVNDAGIDIEILCFNMNEAITDDEIDYA
HHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHH
FVMAKTLGAKAISTSTQVTVAKRVAPFAEKHKMLIGFHGHDNDADPNETGSLESYAKALS
HHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
YGKFNGVNLDIGHFTAANYDAIAFIKENHARITNLHVKDRKKDHGPNVVWGEGDTPIKPV
CCCCCCCEEECCCEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHH
LQLVKKEKYKFPANIELEYPVPEGSDRVAEVKKCLAYMKQALA
HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLYTRRDMGKVALAALPLARAIGAPKINSKVDGVQVGAITYSFGGMNLDDVIKAYMDIGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCC
GEMELMSNTAETAAGAPTPPQGAGRGQGRGPGGPGGGQGRGPGGAGRAAAPRTPRPPMTE
CHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EQIAAARATPRAQELLKWRKELSMDKFKDVRKKVNDAGIDIEILCFNMNEAITDDEIDYA
HHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHH
FVMAKTLGAKAISTSTQVTVAKRVAPFAEKHKMLIGFHGHDNDADPNETGSLESYAKALS
HHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
YGKFNGVNLDIGHFTAANYDAIAFIKENHARITNLHVKDRKKDHGPNVVWGEGDTPIKPV
CCCCCCCEEECCCEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHH
LQLVKKEKYKFPANIELEYPVPEGSDRVAEVKKCLAYMKQALA
HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA