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The map label for this gene is yhjA [C]

Identifier: 116622269

GI number: 116622269

Start: 4006680

End: 4007894

Strand: Reverse

Name: yhjA [C]

Synonym: Acid_3163

Alternate gene names: 116622269

Gene position: 4007894-4006680 (Counterclockwise)

Preceding gene: 116622270

Following gene: 116622268

Centisome position: 40.22

GC content: 62.96

Gene sequence:

>1215_bases
ATGCGATATGAACGGGTGCTGCTGACCGTTGGGCTTGCCGCCGTCGCCGGCATCGCGCAAGACTTTTCGAATATTAATGC
CGGCGGATTCTCGTCGTCGGTCACCGCTGGCCGGTCCGTGGATCTCACCGGTCCATACTTTCAGGCACAGGGCAGCAATG
GACGCAGCTGCTCGACCTGTCACCTGCAGCAAGAAGCATGGAGCATCACACCGGAGACGATCCGTTTACTGTTCGTCCAG
ACCGCTGGCACGCACCCGATTTTCAATCCTCTCGACGCCGACAATCCGGAGGGGGATCTCTCGTCGGCGCAGGCGCGGTC
GATGGGGTACAGCATGATGCTGACCCGCGGCGTCTTTCGCCGGGGCGGCGCACCGGCCGCGGTGCGGGAGTGGGATGTGA
TCGCGGTGGACGACCCGCACGGCTACGCGAATGTGAATCGGATCGTGCAGTGGCGGCGCGTCATGCCGACAATCAACTTC
CGTCTTGGCAGCGCGACAGTCGCCTGGGACGGCGGCAATACGACGGGCGCCGACCAAGTCGCGGGGCTCACGAACCAGGC
GATGAGGAACGTCACCGGTGCTCAACAGGGCCATGCTGCGCCAGCCGACGTGATCGGCGCCATCGTGGGCTTTGAGACGT
CGCTCTCGGCCGCACAACAATTCTCATTCAGCGCCGGAAGTCTCAATGCCGGGGGCGCCCGCGGGGGTCCGGAGGAACTC
CCCGGAATGCTGAAGGCACCAGGGCGATTCGACCTCTTTGACGCCTGGATGAAGTCTCCCTCGGAAGCGCGCGCCAGGAT
CGCCCGCGGCCAGCAGTTATTCAACAACCCCAACGCGGGAAATGGCCGCAGCTGCAACTTCTGCCACAGTTCCTCAAACA
ACGGCACGAACTTTAGCGACGCGCTCTTCGATATCGGCACTGCATCGGCAGAGGCGCGGACGCCGGACCTGCCGCTATAC
ACGATTCGCAACCGAACGACGGGAGAAGAGCGGCGGTTGACGGATACGGGTCAGGGTAACGTGACTGGCTTGTGGAGCGA
CCTCGGGAAATTCAAGACGCCGACACTACGAGCACTCTCCGCACGAGCGCCGTACTTCCATAACGGAATCGCGGCAACGC
TGGATGACGTGGTTCGCCACTACGAGCGCCGTCTGAACTTCGTTTTCACCGACCAAGAGCGAGAGGACCTGGTCGCCTTC
CTCCGGGCGCTCTAA

Upstream 100 bases:

>100_bases
AGCAGGACGCAATAAAACCGGGCTTATGCGTACCCGACTTTTGCAGGGCTGTTCGTGTTGGCGAGTTTTCTCGCATGTCC
TTGGTAGAGGAACTCGAGAA

Downstream 100 bases:

>100_bases
CTTTCGATTGTTCCCACGGCCGGCGCTCGATATTCTATGGAACAGGAGGCGCCGCGCGGCCGGGATCATGTTCGATCGCA
GGTCTCATCTGAACTGCGTC

Product: hypothetical protein

Products: 2 Ferricytochrome C; 2 H2O. [C]

Alternate protein names: Cytochrome C Peroxidase; Cytochrome

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRYERVLLTVGLAAVAGIAQDFSNINAGGFSSSVTAGRSVDLTGPYFQAQGSNGRSCSTCHLQQEAWSITPETIRLLFVQ
TAGTHPIFNPLDADNPEGDLSSAQARSMGYSMMLTRGVFRRGGAPAAVREWDVIAVDDPHGYANVNRIVQWRRVMPTINF
RLGSATVAWDGGNTTGADQVAGLTNQAMRNVTGAQQGHAAPADVIGAIVGFETSLSAAQQFSFSAGSLNAGGARGGPEEL
PGMLKAPGRFDLFDAWMKSPSEARARIARGQQLFNNPNAGNGRSCNFCHSSSNNGTNFSDALFDIGTASAEARTPDLPLY
TIRNRTTGEERRLTDTGQGNVTGLWSDLGKFKTPTLRALSARAPYFHNGIAATLDDVVRHYERRLNFVFTDQEREDLVAF
LRAL

Sequences:

>Translated_404_residues
MRYERVLLTVGLAAVAGIAQDFSNINAGGFSSSVTAGRSVDLTGPYFQAQGSNGRSCSTCHLQQEAWSITPETIRLLFVQ
TAGTHPIFNPLDADNPEGDLSSAQARSMGYSMMLTRGVFRRGGAPAAVREWDVIAVDDPHGYANVNRIVQWRRVMPTINF
RLGSATVAWDGGNTTGADQVAGLTNQAMRNVTGAQQGHAAPADVIGAIVGFETSLSAAQQFSFSAGSLNAGGARGGPEEL
PGMLKAPGRFDLFDAWMKSPSEARARIARGQQLFNNPNAGNGRSCNFCHSSSNNGTNFSDALFDIGTASAEARTPDLPLY
TIRNRTTGEERRLTDTGQGNVTGLWSDLGKFKTPTLRALSARAPYFHNGIAATLDDVVRHYERRLNFVFTDQEREDLVAF
LRAL
>Mature_404_residues
MRYERVLLTVGLAAVAGIAQDFSNINAGGFSSSVTAGRSVDLTGPYFQAQGSNGRSCSTCHLQQEAWSITPETIRLLFVQ
TAGTHPIFNPLDADNPEGDLSSAQARSMGYSMMLTRGVFRRGGAPAAVREWDVIAVDDPHGYANVNRIVQWRRVMPTINF
RLGSATVAWDGGNTTGADQVAGLTNQAMRNVTGAQQGHAAPADVIGAIVGFETSLSAAQQFSFSAGSLNAGGARGGPEEL
PGMLKAPGRFDLFDAWMKSPSEARARIARGQQLFNNPNAGNGRSCNFCHSSSNNGTNFSDALFDIGTASAEARTPDLPLY
TIRNRTTGEERRLTDTGQGNVTGLWSDLGKFKTPTLRALSARAPYFHNGIAATLDDVVRHYERRLNFVFTDQEREDLVAF
LRAL

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.11.1.5 [C]

Molecular weight: Translated: 43428; Mature: 43428

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYERVLLTVGLAAVAGIAQDFSNINAGGFSSSVTAGRSVDLTGPYFQAQGSNGRSCSTC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCEE
HLQQEAWSITPETIRLLFVQTAGTHPIFNPLDADNPEGDLSSAQARSMGYSMMLTRGVFR
EEHHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHH
RGGAPAAVREWDVIAVDDPHGYANVNRIVQWRRVMPTINFRLGSATVAWDGGNTTGADQV
CCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCCCHHHH
AGLTNQAMRNVTGAQQGHAAPADVIGAIVGFETSLSAAQQFSFSAGSLNAGGARGGPEEL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHC
PGMLKAPGRFDLFDAWMKSPSEARARIARGQQLFNNPNAGNGRSCNFCHSSSNNGTNFSD
CHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHH
ALFDIGTASAEARTPDLPLYTIRNRTTGEERRLTDTGQGNVTGLWSDLGKFKTPTLRALS
HHHHCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEHHHHHHCCCCCHHHHHH
ARAPYFHNGIAATLDDVVRHYERRLNFVFTDQEREDLVAFLRAL
CCCCHHHCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHC
>Mature Secondary Structure
MRYERVLLTVGLAAVAGIAQDFSNINAGGFSSSVTAGRSVDLTGPYFQAQGSNGRSCSTC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCEE
HLQQEAWSITPETIRLLFVQTAGTHPIFNPLDADNPEGDLSSAQARSMGYSMMLTRGVFR
EEHHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHH
RGGAPAAVREWDVIAVDDPHGYANVNRIVQWRRVMPTINFRLGSATVAWDGGNTTGADQV
CCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCCCHHHH
AGLTNQAMRNVTGAQQGHAAPADVIGAIVGFETSLSAAQQFSFSAGSLNAGGARGGPEEL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHC
PGMLKAPGRFDLFDAWMKSPSEARARIARGQQLFNNPNAGNGRSCNFCHSSSNNGTNFSD
CHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHH
ALFDIGTASAEARTPDLPLYTIRNRTTGEERRLTDTGQGNVTGLWSDLGKFKTPTLRALS
HHHHCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEHHHHHHCCCCCHHHHHH
ARAPYFHNGIAATLDDVVRHYERRLNFVFTDQEREDLVAFLRAL
CCCCHHHCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2 Ferrocytochrome C; H2O2 [C]

Specific reaction: 2 Ferrocytochrome C + H2O2 = 2 Ferricytochrome C + 2 H2O. [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA