Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622263
Identifier: 116622263
GI number: 116622263
Start: 4000965
End: 4002494
Strand: Direct
Name: 116622263
Synonym: Acid_3157
Alternate gene names: NA
Gene position: 4000965-4002494 (Clockwise)
Preceding gene: 116622262
Following gene: 116622264
Centisome position: 40.15
GC content: 61.57
Gene sequence:
>1530_bases ATGAAATCTGATCCGATTCGGATTTGGGTCTCTTACGCCGTTGTCGCAGTTTCGCTCGCTCTCCCCGGCTGGGCGCAAAA GGATTCCGGAGTGCGCGGCGGTCCACCCGGCGCGGGCGGACCGGTTCCGGGACTTACCGCCAACGAGTTAGCGCTTTTCA ATGAAGGCAAGGTGCGAACTACACAGCTCGAGGCCGTCTGTGACACTTGCAACGATCGGACTCTTGGCTCCGACACGGGA GAAGATCCAAACCTGGTTACGCTGACGAATTCATCGGGATTGGGTGCGCGCTTCAACGGGGACCAATGCTCGGTGTGTCA CCAGCAGCCGGCGATCGGCGGGTCCGGCGGCTTTCTCGTGCCCAATCCCCAGGATCCTGCCAACAGGCACAAGAAGCCCG AGAACCCCATGTTTGACCTGATTCCCCACCGAAAGGGCGGACAGAATCATGTGCCCTCCTTCATCACACAGTACGGGCCT ATCCGCGAGGTTCGATTTCAAAGAAAGCCGGACGGAACACCGGACGGGGGCGTGCACGCGCTGTTCACCATCGTCGGCCG GTCCGATATCGGCGCTCCGGGTTGCACCGCGGCGGTGCTTCCGCCGGTCGATTTCGAAACCCAGGCTCGCAACGGCAACC TGTCGTTCCGAATTCCGTTGCAGACATTCGGACTCGGCCTGATCGAGGCGATTCAGGACGCGACCATTCTGAGTAACTCG GCGTCCACCGCCTCGCTTCGAGCGCCGCTCGGCATTCGCGGCATTGCCAACCGGAGCGGGAACGACGGCACCATCGCCCG CTTCGGCTGGAAGGCGCAGAACAAGTCCCTCGTCGTCTTCGCCGGAGAGGCGTATAACGTCGAGATGGGTGTAACGAATG ACGTGTTCCCCACGGCCAGAGATGAAACGCCAGGTTGCACCTATGGGATTAACGAGCCGAACGACATCACTCGCACCGAT ACCAGCGACATACGAAATCAGGCCTACAACAATCCCTTGCACATGATCGCCGACTGGCTTGGATTCGCCATCTTCATGCG CGAACTGGCGCCGCCTGAACCGGTGCCCTTCTCGCCAAGCGCCCAGCGCGGGCAGCAACTGTTTGGTACGGATGCAAGGA ATCCGGGAATCGGCTGCTTCCTGTGCCACACGCCAGTCATGGTCACGGGGCCCCGGCACGAAACCGAGGCGCTCCAAAGC GTGCCGGCGCATCTCTATTCGGACCTGCTGGTCCATCATATGGGAAGCGGCTTGGCCGACAACATTACCCAGGGTCTTGC CGAGGGCGACATGTTTCGAACCACGCCGCTCTGGGGAATCGGCCAGCGCCTCTTCTTCCTCCACGACGGACGCACCAGCG ACCTGCTCGCCGCGATCGAGGCGCACGCGTCAAGCGGCCGCAACGAGGGCGGCGCCAGTGACAGCGATAATCGTTTTGTA CCCTCGGAAGCGACCGCCGTAACCCGTGCTTTCGATGCCTTGCCGGTCCGCGACAAGCAAGCCATCCTGGACTTCTTGCG ATCGCTCTGA
Upstream 100 bases:
>100_bases CCACAGATTTCCCTGACGAGCCGAATAATTTATGAAAACCTCGCATTCCCCTGGGATAGCCGGCTGGTCTGTGTCACTTC ACCTGCCGGAGGATAACAAA
Downstream 100 bases:
>100_bases AAACAACCGGCGGCCGGCTGTTGGAAGTGTGCAGCCGGCCTCTCTCTCTCCGTTGCCCCAGCCACCACCGATGTAGTACA CTGATTCTTTACTCCTGTGG
Product: thiol oxidoreductase-like protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MKSDPIRIWVSYAVVAVSLALPGWAQKDSGVRGGPPGAGGPVPGLTANELALFNEGKVRTTQLEAVCDTCNDRTLGSDTG EDPNLVTLTNSSGLGARFNGDQCSVCHQQPAIGGSGGFLVPNPQDPANRHKKPENPMFDLIPHRKGGQNHVPSFITQYGP IREVRFQRKPDGTPDGGVHALFTIVGRSDIGAPGCTAAVLPPVDFETQARNGNLSFRIPLQTFGLGLIEAIQDATILSNS ASTASLRAPLGIRGIANRSGNDGTIARFGWKAQNKSLVVFAGEAYNVEMGVTNDVFPTARDETPGCTYGINEPNDITRTD TSDIRNQAYNNPLHMIADWLGFAIFMRELAPPEPVPFSPSAQRGQQLFGTDARNPGIGCFLCHTPVMVTGPRHETEALQS VPAHLYSDLLVHHMGSGLADNITQGLAEGDMFRTTPLWGIGQRLFFLHDGRTSDLLAAIEAHASSGRNEGGASDSDNRFV PSEATAVTRAFDALPVRDKQAILDFLRSL
Sequences:
>Translated_509_residues MKSDPIRIWVSYAVVAVSLALPGWAQKDSGVRGGPPGAGGPVPGLTANELALFNEGKVRTTQLEAVCDTCNDRTLGSDTG EDPNLVTLTNSSGLGARFNGDQCSVCHQQPAIGGSGGFLVPNPQDPANRHKKPENPMFDLIPHRKGGQNHVPSFITQYGP IREVRFQRKPDGTPDGGVHALFTIVGRSDIGAPGCTAAVLPPVDFETQARNGNLSFRIPLQTFGLGLIEAIQDATILSNS ASTASLRAPLGIRGIANRSGNDGTIARFGWKAQNKSLVVFAGEAYNVEMGVTNDVFPTARDETPGCTYGINEPNDITRTD TSDIRNQAYNNPLHMIADWLGFAIFMRELAPPEPVPFSPSAQRGQQLFGTDARNPGIGCFLCHTPVMVTGPRHETEALQS VPAHLYSDLLVHHMGSGLADNITQGLAEGDMFRTTPLWGIGQRLFFLHDGRTSDLLAAIEAHASSGRNEGGASDSDNRFV PSEATAVTRAFDALPVRDKQAILDFLRSL >Mature_509_residues MKSDPIRIWVSYAVVAVSLALPGWAQKDSGVRGGPPGAGGPVPGLTANELALFNEGKVRTTQLEAVCDTCNDRTLGSDTG EDPNLVTLTNSSGLGARFNGDQCSVCHQQPAIGGSGGFLVPNPQDPANRHKKPENPMFDLIPHRKGGQNHVPSFITQYGP IREVRFQRKPDGTPDGGVHALFTIVGRSDIGAPGCTAAVLPPVDFETQARNGNLSFRIPLQTFGLGLIEAIQDATILSNS ASTASLRAPLGIRGIANRSGNDGTIARFGWKAQNKSLVVFAGEAYNVEMGVTNDVFPTARDETPGCTYGINEPNDITRTD TSDIRNQAYNNPLHMIADWLGFAIFMRELAPPEPVPFSPSAQRGQQLFGTDARNPGIGCFLCHTPVMVTGPRHETEALQS VPAHLYSDLLVHHMGSGLADNITQGLAEGDMFRTTPLWGIGQRLFFLHDGRTSDLLAAIEAHASSGRNEGGASDSDNRFV PSEATAVTRAFDALPVRDKQAILDFLRSL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54394; Mature: 54394
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDPIRIWVSYAVVAVSLALPGWAQKDSGVRGGPPGAGGPVPGLTANELALFNEGKVRT CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE TQLEAVCDTCNDRTLGSDTGEDPNLVTLTNSSGLGARFNGDQCSVCHQQPAIGGSGGFLV HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHCCCCCCCCCCEEC PNPQDPANRHKKPENPMFDLIPHRKGGQNHVPSFITQYGPIREVRFQRKPDGTPDGGVHA CCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCEE LFTIVGRSDIGAPGCTAAVLPPVDFETQARNGNLSFRIPLQTFGLGLIEAIQDATILSNS EEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCC ASTASLRAPLGIRGIANRSGNDGTIARFGWKAQNKSLVVFAGEAYNVEMGVTNDVFPTAR CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCC DETPGCTYGINEPNDITRTDTSDIRNQAYNNPLHMIADWLGFAIFMRELAPPEPVPFSPS CCCCCCEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AQRGQQLFGTDARNPGIGCFLCHTPVMVTGPRHETEALQSVPAHLYSDLLVHHMGSGLAD HHHHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH NITQGLAEGDMFRTTPLWGIGQRLFFLHDGRTSDLLAAIEAHASSGRNEGGASDSDNRFV HHHHHHHCCCCEECCCCHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEC PSEATAVTRAFDALPVRDKQAILDFLRSL CCHHHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKSDPIRIWVSYAVVAVSLALPGWAQKDSGVRGGPPGAGGPVPGLTANELALFNEGKVRT CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE TQLEAVCDTCNDRTLGSDTGEDPNLVTLTNSSGLGARFNGDQCSVCHQQPAIGGSGGFLV HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHCCCCCCCCCCEEC PNPQDPANRHKKPENPMFDLIPHRKGGQNHVPSFITQYGPIREVRFQRKPDGTPDGGVHA CCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCEE LFTIVGRSDIGAPGCTAAVLPPVDFETQARNGNLSFRIPLQTFGLGLIEAIQDATILSNS EEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCC ASTASLRAPLGIRGIANRSGNDGTIARFGWKAQNKSLVVFAGEAYNVEMGVTNDVFPTAR CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCC DETPGCTYGINEPNDITRTDTSDIRNQAYNNPLHMIADWLGFAIFMRELAPPEPVPFSPS CCCCCCEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AQRGQQLFGTDARNPGIGCFLCHTPVMVTGPRHETEALQSVPAHLYSDLLVHHMGSGLAD HHHHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH NITQGLAEGDMFRTTPLWGIGQRLFFLHDGRTSDLLAAIEAHASSGRNEGGASDSDNRFV HHHHHHHCCCCEECCCCHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEC PSEATAVTRAFDALPVRDKQAILDFLRSL CCHHHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA