Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622253
Identifier: 116622253
GI number: 116622253
Start: 3988520
End: 3989470
Strand: Direct
Name: 116622253
Synonym: Acid_3146
Alternate gene names: NA
Gene position: 3988520-3989470 (Clockwise)
Preceding gene: 116622252
Following gene: 116622254
Centisome position: 40.02
GC content: 62.99
Gene sequence:
>951_bases GTGAAGCTATCGCCGCTCTACTTACTCTTTCTTTCATCCATCTATTCGATCCCTGCCCAGACCGCTGCAACCCTGGCGTC AGCGGGCTACACCGCGCCCGCCGCGCCAGTTGCAGTAGCTCCGGGCCAGGTGGTCACCTTATTCTTCCGTGGAGTCCCGC CTTTACCGGACGGCACGTTGCGAGCCGGCGAGGCAAAAACTACGCCCTTGCCCACTACCCTCGCCGGACTTTCCGCATCC ATCGATCAACCCCACGCCAGCCTGCCGGTCTTCGCCGTTCGTCAGGAGAGCGATTGCCAGGGCGATCAGACCGGGCAGTC CTGTCTCCTCACCTCGCTGCGAGTTCAGATCCCCACCGATTTCCTCCAGCCGGTGATGAGCCTTGTGCTTACCGTAGACG GGCAGGCCACCCGCAATTTCCCGCTCACCGCAATCAGCGACAATGCGCACGTACTCACTTCCTGCGATTTGACCTGGGAT ACCTATTGGGCACGTTCCTGCACCCGCCTCGCTTTTCATTCCGACGGAACCACCCCGGTGTCCGCCAACGCGCCTGCGCA GCGCGGCGAAACCCTCGTCATTTACCTTTGGGGCCTCGGCATCACTTCGCCTGCGGTACCCGCCGGCACCGTCTCGCCCT CCGGCGCGGCGCTGAAGCAATTCCCGGGCGTCCCTGGCGTCCGCGCCAGATTTCTCGACCGCCCTCTGACCTCGCTTACC GCCATACCGGCCTACTACTCTGCCGAGGACGCCACCACTTCTGGGTCGCCAATCGACTTCGCCGGCCTCACTCCCGGCCA AGTGGGTCTCTACCAATTGAACATTCCCCTCCCCGGCTCGCTCAACCCCTCGACGGTCTGCGCGGATCCGGTCCTTGGCA ATGCGGTGCTCAATGTCACGACCATATTCGGCGCCACGCAGGAAGTACCGATCTGCGCCAAATCGCGTTAA
Upstream 100 bases:
>100_bases CCGCGACCGTAGGAGCGATCGAAGTTTTACACTCAGCACTTCAACAATTCGGCGCCCTGCTTCATCAAGATCTACAGACA TTCCCATCTTGGAGAACTCA
Downstream 100 bases:
>100_bases TTAAGGCAGGCCTCCGGGCCGGGCTGCTTGTAGGCGTAGAACTCGGGACCTGACGGATTCGCCACCGCCTGCAAACACTC GCCGTGCCAAACAGCCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKLSPLYLLFLSSIYSIPAQTAATLASAGYTAPAAPVAVAPGQVVTLFFRGVPPLPDGTLRAGEAKTTPLPTTLAGLSAS IDQPHASLPVFAVRQESDCQGDQTGQSCLLTSLRVQIPTDFLQPVMSLVLTVDGQATRNFPLTAISDNAHVLTSCDLTWD TYWARSCTRLAFHSDGTTPVSANAPAQRGETLVIYLWGLGITSPAVPAGTVSPSGAALKQFPGVPGVRARFLDRPLTSLT AIPAYYSAEDATTSGSPIDFAGLTPGQVGLYQLNIPLPGSLNPSTVCADPVLGNAVLNVTTIFGATQEVPICAKSR
Sequences:
>Translated_316_residues MKLSPLYLLFLSSIYSIPAQTAATLASAGYTAPAAPVAVAPGQVVTLFFRGVPPLPDGTLRAGEAKTTPLPTTLAGLSAS IDQPHASLPVFAVRQESDCQGDQTGQSCLLTSLRVQIPTDFLQPVMSLVLTVDGQATRNFPLTAISDNAHVLTSCDLTWD TYWARSCTRLAFHSDGTTPVSANAPAQRGETLVIYLWGLGITSPAVPAGTVSPSGAALKQFPGVPGVRARFLDRPLTSLT AIPAYYSAEDATTSGSPIDFAGLTPGQVGLYQLNIPLPGSLNPSTVCADPVLGNAVLNVTTIFGATQEVPICAKSR >Mature_316_residues MKLSPLYLLFLSSIYSIPAQTAATLASAGYTAPAAPVAVAPGQVVTLFFRGVPPLPDGTLRAGEAKTTPLPTTLAGLSAS IDQPHASLPVFAVRQESDCQGDQTGQSCLLTSLRVQIPTDFLQPVMSLVLTVDGQATRNFPLTAISDNAHVLTSCDLTWD TYWARSCTRLAFHSDGTTPVSANAPAQRGETLVIYLWGLGITSPAVPAGTVSPSGAALKQFPGVPGVRARFLDRPLTSLT AIPAYYSAEDATTSGSPIDFAGLTPGQVGLYQLNIPLPGSLNPSTVCADPVLGNAVLNVTTIFGATQEVPICAKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32851; Mature: 32851
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSPLYLLFLSSIYSIPAQTAATLASAGYTAPAAPVAVAPGQVVTLFFRGVPPLPDGTL CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCE RAGEAKTTPLPTTLAGLSASIDQPHASLPVFAVRQESDCQGDQTGQSCLLTSLRVQIPTD ECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHEEECCHH FLQPVMSLVLTVDGQATRNFPLTAISDNAHVLTSCDLTWDTYWARSCTRLAFHSDGTTPV HHHHHHHHEEECCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHEEEEECCCCCCC SANAPAQRGETLVIYLWGLGITSPAVPAGTVSPSGAALKQFPGVPGVRARFLDRPLTSLT CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCHHHHH AIPAYYSAEDATTSGSPIDFAGLTPGQVGLYQLNIPLPGSLNPSTVCADPVLGNAVLNVT HCCCEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCHHEEEE TIFGATQEVPICAKSR EEECCCCCCCEECCCC >Mature Secondary Structure MKLSPLYLLFLSSIYSIPAQTAATLASAGYTAPAAPVAVAPGQVVTLFFRGVPPLPDGTL CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCE RAGEAKTTPLPTTLAGLSASIDQPHASLPVFAVRQESDCQGDQTGQSCLLTSLRVQIPTD ECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHEEECCHH FLQPVMSLVLTVDGQATRNFPLTAISDNAHVLTSCDLTWDTYWARSCTRLAFHSDGTTPV HHHHHHHHEEECCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHEEEEECCCCCCC SANAPAQRGETLVIYLWGLGITSPAVPAGTVSPSGAALKQFPGVPGVRARFLDRPLTSLT CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCHHHHH AIPAYYSAEDATTSGSPIDFAGLTPGQVGLYQLNIPLPGSLNPSTVCADPVLGNAVLNVT HCCCEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCHHEEEE TIFGATQEVPICAKSR EEECCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA