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The map label for this gene is 116622246

Identifier: 116622246

GI number: 116622246

Start: 3980885

End: 3982021

Strand: Reverse

Name: 116622246

Synonym: Acid_3139

Alternate gene names: NA

Gene position: 3982021-3980885 (Counterclockwise)

Preceding gene: 116622247

Following gene: 116622235

Centisome position: 39.96

GC content: 66.31

Gene sequence:

>1137_bases
ATGAGCAACGCCATTGAAAGTGTTCTGACGCCCGCCCTGGTCGTCTTTCCCGAAATCGTCGCGCACAACATCGAGCGCAC
CCTCGCGCGCCTGGGTGGCGATCCGGAGCGCTGGCGTCCTCATGTCAAGACCTCGAAGCTGATCTCCACCATGCGCCAGA
TGACCGGGCGCGGAATCCGGAGCTTCAAGTGCGCCACCACCCTCGAGCTCCGCACTATCTGCGAAGCCGGCGCCGCCGAC
GTTTTGGTGGCATTCGCGTGCTGGGGATCCCGCGCCCGCCGCGTCGCCGAAATCGCAGCGGAATTCCCCGCCGTCGCCGT
CTCCGCCCTCGTCGAGGACGCCCGCAATCTCGGCGAATGGAGCGGCACCAACATCGGCATCTTCATCGACGTCAACCCTG
GGGGCAACCGCACCGGCATCGAGCAGGAGCGCATCGAGGACATCGTGGAACTCGCGCGCGCCATTCGCCGCGCCGGCCTG
GTATTCCGCGGCCTGCACTACTACGATGGCCACCACCGCCATGCCGATCTCGCCGAGCGCACCGCCGCCTCATGGGCCGG
GTACGATCGACTGATGGACATCGTCTCCGCCCTCACCGCGGCAGGTTGCGCGCCCGCTGAAGTCGTGACTTCGGGAACGC
CTGCCCTTCCCTGCTCCATCTCGTATCCGCGCTTTCAGAACGCGCCCTTCATTCACCGGGTCTCGCCCGGCACCGTCGTC
TACAACGATATGAGCAGCCTGCAACAACTGCCTGACTGGGGATATCAGCCCGCGGTCTTCGTCGTCGCTACCGTTATCAG
CCACCCCATCGATGGCATCGTGACGTGTGACGCCGGCCACAAATCCGTCTCCGCCGATTCCGGCGTCCCCACGTGCACCG
TGCGCGACAGGCCCGATCTCGAGCCGCTATCCCCGAGCGAAGAGCACCTGCCCATTCGCGTCCCGGCCGGTGCCGCCGAG
CCCAAGCCCGGAGACCTGCTTTACCTGATCCCGAGACACGTCTGCCCCACCGTCAACAATTTCGACCATGCGCTGCTCGT
CGTGGATGGCCGCTACATCGTGGCCGCCGTCAGCGCCCGCGGCCGCGAGGCGCCCCTCCCGGTATCCGGCGAGTCGGTCG
CCGCTAATTCTCTGTAG

Upstream 100 bases:

>100_bases
TCTGAAGGGCGCTGCCAATCTCGAGATCGCGACCGCGCTGGCCCCCGCCTTCCGGCAACTGCTGTCGTAGGCGTTACGTC
GTAGGCCTTACCATGTAGGA

Downstream 100 bases:

>100_bases
GCGTGCGATCGGCCCGGTCGATCACCAAAGTTTCGACCGGCGCCCTGCGCGGTTCCAGTTTCAGTCCGAGTTGCTGCAGC
GCGGACATCAGCGATGGCCC

Product: amino acid aldolase or racemase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSNAIESVLTPALVVFPEIVAHNIERTLARLGGDPERWRPHVKTSKLISTMRQMTGRGIRSFKCATTLELRTICEAGAAD
VLVAFACWGSRARRVAEIAAEFPAVAVSALVEDARNLGEWSGTNIGIFIDVNPGGNRTGIEQERIEDIVELARAIRRAGL
VFRGLHYYDGHHRHADLAERTAASWAGYDRLMDIVSALTAAGCAPAEVVTSGTPALPCSISYPRFQNAPFIHRVSPGTVV
YNDMSSLQQLPDWGYQPAVFVVATVISHPIDGIVTCDAGHKSVSADSGVPTCTVRDRPDLEPLSPSEEHLPIRVPAGAAE
PKPGDLLYLIPRHVCPTVNNFDHALLVVDGRYIVAAVSARGREAPLPVSGESVAANSL

Sequences:

>Translated_378_residues
MSNAIESVLTPALVVFPEIVAHNIERTLARLGGDPERWRPHVKTSKLISTMRQMTGRGIRSFKCATTLELRTICEAGAAD
VLVAFACWGSRARRVAEIAAEFPAVAVSALVEDARNLGEWSGTNIGIFIDVNPGGNRTGIEQERIEDIVELARAIRRAGL
VFRGLHYYDGHHRHADLAERTAASWAGYDRLMDIVSALTAAGCAPAEVVTSGTPALPCSISYPRFQNAPFIHRVSPGTVV
YNDMSSLQQLPDWGYQPAVFVVATVISHPIDGIVTCDAGHKSVSADSGVPTCTVRDRPDLEPLSPSEEHLPIRVPAGAAE
PKPGDLLYLIPRHVCPTVNNFDHALLVVDGRYIVAAVSARGREAPLPVSGESVAANSL
>Mature_377_residues
SNAIESVLTPALVVFPEIVAHNIERTLARLGGDPERWRPHVKTSKLISTMRQMTGRGIRSFKCATTLELRTICEAGAADV
LVAFACWGSRARRVAEIAAEFPAVAVSALVEDARNLGEWSGTNIGIFIDVNPGGNRTGIEQERIEDIVELARAIRRAGLV
FRGLHYYDGHHRHADLAERTAASWAGYDRLMDIVSALTAAGCAPAEVVTSGTPALPCSISYPRFQNAPFIHRVSPGTVVY
NDMSSLQQLPDWGYQPAVFVVATVISHPIDGIVTCDAGHKSVSADSGVPTCTVRDRPDLEPLSPSEEHLPIRVPAGAAEP
KPGDLLYLIPRHVCPTVNNFDHALLVVDGRYIVAAVSARGREAPLPVSGESVAANSL

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 40630; Mature: 40498

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAIESVLTPALVVFPEIVAHNIERTLARLGGDPERWRPHVKTSKLISTMRQMTGRGIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCC
SFKCATTLELRTICEAGAADVLVAFACWGSRARRVAEIAAEFPAVAVSALVEDARNLGEW
CEEHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGTNIGIFIDVNPGGNRTGIEQERIEDIVELARAIRRAGLVFRGLHYYDGHHRHADLAER
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TAASWAGYDRLMDIVSALTAAGCAPAEVVTSGTPALPCSISYPRFQNAPFIHRVSPGTVV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
YNDMSSLQQLPDWGYQPAVFVVATVISHPIDGIVTCDAGHKSVSADSGVPTCTVRDRPDL
ECCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCC
EPLSPSEEHLPIRVPAGAAEPKPGDLLYLIPRHVCPTVNNFDHALLVVDGRYIVAAVSAR
CCCCCCCCCCCEEECCCCCCCCCCCEEEECCHHHCCCCCCCCCEEEEECCCEEEEEECCC
GREAPLPVSGESVAANSL
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNAIESVLTPALVVFPEIVAHNIERTLARLGGDPERWRPHVKTSKLISTMRQMTGRGIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCC
SFKCATTLELRTICEAGAADVLVAFACWGSRARRVAEIAAEFPAVAVSALVEDARNLGEW
CEEHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGTNIGIFIDVNPGGNRTGIEQERIEDIVELARAIRRAGLVFRGLHYYDGHHRHADLAER
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TAASWAGYDRLMDIVSALTAAGCAPAEVVTSGTPALPCSISYPRFQNAPFIHRVSPGTVV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
YNDMSSLQQLPDWGYQPAVFVVATVISHPIDGIVTCDAGHKSVSADSGVPTCTVRDRPDL
ECCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCC
EPLSPSEEHLPIRVPAGAAEPKPGDLLYLIPRHVCPTVNNFDHALLVVDGRYIVAAVSAR
CCCCCCCCCCCEEECCCCCCCCCCCEEEECCHHHCCCCCCCCCEEEEECCCEEEEEECCC
GREAPLPVSGESVAANSL
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]