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The map label for this gene is dsbE [C]

Identifier: 116622232

GI number: 116622232

Start: 3960398

End: 3961573

Strand: Reverse

Name: dsbE [C]

Synonym: Acid_3125

Alternate gene names: 116622232

Gene position: 3961573-3960398 (Counterclockwise)

Preceding gene: 116622233

Following gene: 116622231

Centisome position: 39.75

GC content: 63.44

Gene sequence:

>1176_bases
ATGCTCAACCGGCACACGGCCGTACTTTCCCTTGCACTCGTCCTGTCCTGCGCCGCACTTCGCGCGCAGGACGAAGTCGC
GCATCCGGCCGCGGGAGCGCCCCCCATTCTGCCCGTCGGTTCCCCCGCGCCGGATTTCAACCTGCCCGGCATCGATGGCA
AGCTCCACAACCTGGCCGAATATCGCGCGAGCAAGGTGCTGGTCGTCGTCTTCACCTGCGATCACTGCCCGGTGGCGCAG
ATGTACGAGAAGCGCATCAAGGAACTCACCGCCGATTATCGCGATCGCGGCGTCGCGGTAGTCGCGATCAATCCCAACGA
CCCAAATGCCGTCCGCTACAGCGAAATGGGTCACACCGATGTCGGCGATACCCTGGCCGAAATGAAGATCCGCGCCGAGT
ACCGCCACTTCAACTTTCCCTATCTCTCCGATGGCGCGACGCAAGCCGTCTCGCTCAAGTACGGTCCCACCGCGACGCCG
CACGCCTTCATCTTCGACGAGAAGCGCATCCTCCGCTACCAGGGACGCATCGATAGCAGCCAGCGCGAAGAACTCGTGAC
CAGGCACGAAACGCGCGATGCCATCGAGGCGCTGCTCGGCGGCAAGCCGGTCGCCGTGCAGAACACGCCCGCGGTGGGCT
GCTCCACCAAGTGGTCGGAGAAGAAGACCGGCGCGGCCGCGGAGGTCGCCGCCACCGAGAAGGCGAACGTCGCGTTGGAG
GCGGTAAATCTCGATCAGCTTCGCGCGCTGCGCAAGAACGGCACCGGCAAATTCCTGTTGATCAACTTCTGGGCCACGTG
GTGCGAGCCCTGCGTCGCCGAATTCCCCGAGTTGCAGCGGGAGCTCGCGATGTACCGCAAGCGGCCGTTCGACGTGGTCA
CGGTCAGCATCAATACGCCCGATGAACGCAGCGGCGTCCTCAGCTTCCTTAAGGAACTGCACGCGGGAACCAGGAACCTG
CTCTTCGATTTCAACGACCCCGCGGACGGCATCGCCGCCTTCGGGACCAACTGGGCCGGAGGCGTTCCGTACACCGTGCT
GCTCAGTCCCGAGGGCGAAATCGTTTACCGGGTGCAGGGCGCGATCAACCCGTTCGAAGTACGCCGCACGATCTTGAAGT
ATCTGCCGGACGATCACTACATCGGCACGCACGCTTACTGGAACAGCGTGTTTTAA

Upstream 100 bases:

>100_bases
ACACAACGCCGACCAGCACTGCCTTCGGCGCCGTGACTACGCAGAAAAATGTCCCGCGGCGCCTGCAGGCCACCATTCGC
CTGACGTTCTAGGAGACAGC

Downstream 100 bases:

>100_bases
TAGGAATCCTCATGATCACTTTTCCGAGACTCGCAGTTCTTGCGGCCGGCCTGGCGTCCGCCGCATCCGCCCAAGGCGCC
GCCAACCTGGGAATCTTCGA

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: Redoxin Domain Protein; Redoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin Family Protein; Thioredoxin; Thiol-Disulfide Isomerase Or Thioredoxin; Peroxiredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Thioredoxin-Related Transmembrane Protein; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thioredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLNRHTAVLSLALVLSCAALRAQDEVAHPAAGAPPILPVGSPAPDFNLPGIDGKLHNLAEYRASKVLVVVFTCDHCPVAQ
MYEKRIKELTADYRDRGVAVVAINPNDPNAVRYSEMGHTDVGDTLAEMKIRAEYRHFNFPYLSDGATQAVSLKYGPTATP
HAFIFDEKRILRYQGRIDSSQREELVTRHETRDAIEALLGGKPVAVQNTPAVGCSTKWSEKKTGAAAEVAATEKANVALE
AVNLDQLRALRKNGTGKFLLINFWATWCEPCVAEFPELQRELAMYRKRPFDVVTVSINTPDERSGVLSFLKELHAGTRNL
LFDFNDPADGIAAFGTNWAGGVPYTVLLSPEGEIVYRVQGAINPFEVRRTILKYLPDDHYIGTHAYWNSVF

Sequences:

>Translated_391_residues
MLNRHTAVLSLALVLSCAALRAQDEVAHPAAGAPPILPVGSPAPDFNLPGIDGKLHNLAEYRASKVLVVVFTCDHCPVAQ
MYEKRIKELTADYRDRGVAVVAINPNDPNAVRYSEMGHTDVGDTLAEMKIRAEYRHFNFPYLSDGATQAVSLKYGPTATP
HAFIFDEKRILRYQGRIDSSQREELVTRHETRDAIEALLGGKPVAVQNTPAVGCSTKWSEKKTGAAAEVAATEKANVALE
AVNLDQLRALRKNGTGKFLLINFWATWCEPCVAEFPELQRELAMYRKRPFDVVTVSINTPDERSGVLSFLKELHAGTRNL
LFDFNDPADGIAAFGTNWAGGVPYTVLLSPEGEIVYRVQGAINPFEVRRTILKYLPDDHYIGTHAYWNSVF
>Mature_391_residues
MLNRHTAVLSLALVLSCAALRAQDEVAHPAAGAPPILPVGSPAPDFNLPGIDGKLHNLAEYRASKVLVVVFTCDHCPVAQ
MYEKRIKELTADYRDRGVAVVAINPNDPNAVRYSEMGHTDVGDTLAEMKIRAEYRHFNFPYLSDGATQAVSLKYGPTATP
HAFIFDEKRILRYQGRIDSSQREELVTRHETRDAIEALLGGKPVAVQNTPAVGCSTKWSEKKTGAAAEVAATEKANVALE
AVNLDQLRALRKNGTGKFLLINFWATWCEPCVAEFPELQRELAMYRKRPFDVVTVSINTPDERSGVLSFLKELHAGTRNL
LFDFNDPADGIAAFGTNWAGGVPYTVLLSPEGEIVYRVQGAINPFEVRRTILKYLPDDHYIGTHAYWNSVF

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43209; Mature: 43209

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRHTAVLSLALVLSCAALRAQDEVAHPAAGAPPILPVGSPAPDFNLPGIDGKLHNLAE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
YRASKVLVVVFTCDHCPVAQMYEKRIKELTADYRDRGVAVVAINPNDPNAVRYSEMGHTD
HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCC
VGDTLAEMKIRAEYRHFNFPYLSDGATQAVSLKYGPTATPHAFIFDEKRILRYQGRIDSS
HHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCCEEEECCHHHHHCCCCCCCH
QREELVTRHETRDAIEALLGGKPVAVQNTPAVGCSTKWSEKKTGAAAEVAATEKANVALE
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
AVNLDQLRALRKNGTGKFLLINFWATWCEPCVAEFPELQRELAMYRKRPFDVVTVSINTP
EECHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
DERSGVLSFLKELHAGTRNLLFDFNDPADGIAAFGTNWAGGVPYTVLLSPEGEIVYRVQG
CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCCCEEEEEEC
AINPFEVRRTILKYLPDDHYIGTHAYWNSVF
CCCHHHHHHHHHHHCCCCCEECCHHHHCCCC
>Mature Secondary Structure
MLNRHTAVLSLALVLSCAALRAQDEVAHPAAGAPPILPVGSPAPDFNLPGIDGKLHNLAE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
YRASKVLVVVFTCDHCPVAQMYEKRIKELTADYRDRGVAVVAINPNDPNAVRYSEMGHTD
HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCC
VGDTLAEMKIRAEYRHFNFPYLSDGATQAVSLKYGPTATPHAFIFDEKRILRYQGRIDSS
HHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCCEEEECCHHHHHCCCCCCCH
QREELVTRHETRDAIEALLGGKPVAVQNTPAVGCSTKWSEKKTGAAAEVAATEKANVALE
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
AVNLDQLRALRKNGTGKFLLINFWATWCEPCVAEFPELQRELAMYRKRPFDVVTVSINTP
EECHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
DERSGVLSFLKELHAGTRNLLFDFNDPADGIAAFGTNWAGGVPYTVLLSPEGEIVYRVQG
CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCCCEEEEEEC
AINPFEVRRTILKYLPDDHYIGTHAYWNSVF
CCCHHHHHHHHHHHCCCCCEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA