Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 116622221
GI number: 116622221
Start: 3948440
End: 3949129
Strand: Direct
Name: zraS [H]
Synonym: Acid_3114
Alternate gene names: 116622221
Gene position: 3948440-3949129 (Clockwise)
Preceding gene: 116622216
Following gene: 116622223
Centisome position: 39.62
GC content: 61.88
Gene sequence:
>690_bases ATGAACACAACCTCCAATCAAAGCTCGTTAACTGAAGTACAGTCATTTCTGCATGATTTGCGCAACCCCCTGTCGGCCAT TCACGGTGGCGCGGAGATACTGGTGCGGTCTAACCTTTCGCAGCCGCAGGTTCACCGCATCGCGCGCAACATGTGCTGCG CCGCTATCCGAATTCGCGAATTGCTGGAACTCTGCCTGGATCGCAGCCGCTGCCGGACCAAAAAAGTGGAAATCGCCGAT CTGCGCGCGGTGGTGGCCGCCGCGGTGGACCGGATTGCAGTCAGTGCCGAGTTTCAAGCCGTACAGATCGTGCAGGCCAT ACCGGAACGACTCCGCATTGCGATGGACCTCAATCGCATCCATCGCGCCCTCGTGAATCTTCTGGTCAACGCGTTGGAAG TCATGCCACAAGGTGGAACGATCCACGTATCCGCGATTCCCGAGGGCCGCTCGGTATTGATCCGCGTTCGCGATACCGGC CCGGGGATCGCTCCGGAAATCAGGGATCGCCTCTTCCAACCCTTCGCCACCGCGGGCAAGGCGGGCGGTCTCGGTCTCGG CCTGGCCTTCTCACGGCAGGCTGCGATCGATCACGGCGGCGAGATCTGGGCGGAATCGCCTAGCCGCGGAGCCTGCCTCG TCATTCGACTTCCGCGCACGCTCGCCAAGCCGCGCGCAGCCTCACGCTGA
Upstream 100 bases:
>100_bases GAAAGGAGTCGCATTTCCGTTCCGAGGATGAACTCATTGCATTCCTGCGCGAACGCTTTGCCGAGAGTTTTCAGCGGGCG TCGCGAAATGAAGGGACAGT
Downstream 100 bases:
>100_bases GGCCACCCGCGGGAGAAGCCGCCGGACCGGTGGAGCGTTGAGCAGCGACTCGATCAGTGGATCGCATTCCTCAAACGAGC CGGCCAGCTGCCGGATAATT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MNTTSNQSSLTEVQSFLHDLRNPLSAIHGGAEILVRSNLSQPQVHRIARNMCCAAIRIRELLELCLDRSRCRTKKVEIAD LRAVVAAAVDRIAVSAEFQAVQIVQAIPERLRIAMDLNRIHRALVNLLVNALEVMPQGGTIHVSAIPEGRSVLIRVRDTG PGIAPEIRDRLFQPFATAGKAGGLGLGLAFSRQAAIDHGGEIWAESPSRGACLVIRLPRTLAKPRAASR
Sequences:
>Translated_229_residues MNTTSNQSSLTEVQSFLHDLRNPLSAIHGGAEILVRSNLSQPQVHRIARNMCCAAIRIRELLELCLDRSRCRTKKVEIAD LRAVVAAAVDRIAVSAEFQAVQIVQAIPERLRIAMDLNRIHRALVNLLVNALEVMPQGGTIHVSAIPEGRSVLIRVRDTG PGIAPEIRDRLFQPFATAGKAGGLGLGLAFSRQAAIDHGGEIWAESPSRGACLVIRLPRTLAKPRAASR >Mature_229_residues MNTTSNQSSLTEVQSFLHDLRNPLSAIHGGAEILVRSNLSQPQVHRIARNMCCAAIRIRELLELCLDRSRCRTKKVEIAD LRAVVAAAVDRIAVSAEFQAVQIVQAIPERLRIAMDLNRIHRALVNLLVNALEVMPQGGTIHVSAIPEGRSVLIRVRDTG PGIAPEIRDRLFQPFATAGKAGGLGLGLAFSRQAAIDHGGEIWAESPSRGACLVIRLPRTLAKPRAASR
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=206, Percent_Identity=30.5825242718447, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1790861, Length=214, Percent_Identity=31.3084112149533, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786912, Length=215, Percent_Identity=33.0232558139535, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI87081816, Length=211, Percent_Identity=30.8056872037915, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788549, Length=205, Percent_Identity=30.2439024390244, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1790300, Length=219, Percent_Identity=27.8538812785388, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789808, Length=199, Percent_Identity=30.6532663316583, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790346, Length=225, Percent_Identity=30.2222222222222, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1786783, Length=210, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI48994928, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787894, Length=201, Percent_Identity=29.8507462686567, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786600, Length=191, Percent_Identity=27.2251308900524, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 24877; Mature: 24877
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTSNQSSLTEVQSFLHDLRNPLSAIHGGAEILVRSNLSQPQVHRIARNMCCAAIRIRE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHH LLELCLDRSRCRTKKVEIADLRAVVAAAVDRIAVSAEFQAVQIVQAIPERLRIAMDLNRI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRALVNLLVNALEVMPQGGTIHVSAIPEGRSVLIRVRDTGPGIAPEIRDRLFQPFATAGK HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCC AGGLGLGLAFSRQAAIDHGGEIWAESPSRGACLVIRLPRTLAKPRAASR CCCCEECHHHHHHHHHCCCCCEECCCCCCCCEEEEECCHHHCCCCCCCC >Mature Secondary Structure MNTTSNQSSLTEVQSFLHDLRNPLSAIHGGAEILVRSNLSQPQVHRIARNMCCAAIRIRE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHH LLELCLDRSRCRTKKVEIADLRAVVAAAVDRIAVSAEFQAVQIVQAIPERLRIAMDLNRI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRALVNLLVNALEVMPQGGTIHVSAIPEGRSVLIRVRDTGPGIAPEIRDRLFQPFATAGK HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCC AGGLGLGLAFSRQAAIDHGGEIWAESPSRGACLVIRLPRTLAKPRAASR CCCCEECHHHHHHHHHCCCCCEECCCCCCCCEEEEECCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]