| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is oar [H]
Identifier: 116622173
GI number: 116622173
Start: 3867198
End: 3870068
Strand: Direct
Name: oar [H]
Synonym: Acid_3065
Alternate gene names: 116622173
Gene position: 3867198-3870068 (Clockwise)
Preceding gene: 116622172
Following gene: 116622174
Centisome position: 38.81
GC content: 59.11
Gene sequence:
>2871_bases ATGAAAGTTCAAAAACGTCCTGCCCTGTGGGTGCTTTCGGCCGTAGTGGCGTTGCTTGCGCCCGCGGCGGTTTCTTTGGC TCAGGTCGGCGATGCGGAACTTGCCGGCGTGGTTACCGATCCGAGCGGCGCTCCGGTCGCCAGCGCGAAGCTCTCGCTGC TTAACGAAGATTCGGGCGTGAATCGCGCACTGCTGACGGATGCGGAGGGCCACTATCACTTCCCCGCGCTCGCGCCGGGG AGATACTCGCTGAAAACCGAAGCCAGTGGATTCCGGAGTTCGAGCCTCACCGGCATTGTCCTTAACGTGGGAACGCATCT GGAGACGAATGTCGCGCTAATCGTCGGAAATGTTCAGGAGCAAGTCACGGTGACGGCCGAGACACCGCCCATCGACACTT CCAAGGGCGATGTCTCGGGCGTGGTCACGCAACAGCAGATCGATACTCTCCCGGTCAACACACGCCAGTACCTGAACCTG GCACTGCTCATGCCGGGCACGACGCAGGACGCCTCGCGCACGTTCTATAACAACGTGCAGATCGGCGGCGGCGGACGCTT TTATGCCAACGGCTTCGTGGTGGATGGAGTCACCAATACTTGGGCCGAACAGGGCGAGCCGCGCCAGAATTTCCCCGAAG GCGCGGTGCAGGAGTTCCGCATCAACACCAACCAGTTCAAGGCTGAACAGGGGCTGGCCATGGGCGGGCTGGTGAACGTG GTGACGAAGAGCGGGACCAACCACTTTCATGGCGAGGGATTCGAGTATTTTCGCGACTCGGCGCTGAACCACGATAACAA GTTCACCGAGCAGGCATTTCAATCCGTGGGGCGGACCGGCAAGGCGCCGTTCCGCCGCAACCAATTTGGCGGCGACATAG GCGGTCCGATCGTCAAGAACAAGACCCACGTCTACGTTGCTTACGAGCGCACGCAGGTGGACGATTCGTTTACCATCTTC GCCGCGGGTTCGCACCAGTTCTACGGGGCCAACGAAGGAGTGATCGATAAACCGAGCCACGATCAGATGTTCAACGTGCG AGTGGATCATTCGATCAGCAACACCCAGCATGCCTTCGCCCGCTACTCCCAGGAGTGGAATAAGCAGACCTGGCAAGGAT GCGGGGGTACGGTGGAATCGAACTGCTATGACGGCCTGATTCCGCGCCACTCCTTCGTCGGCGGCCATACGTGGACGGCG AAGCCGACTCTGGTAAACGAATTCCGCTTTCAATATGCCCTGGCCTCCTATTTGTTAGGACCTTCCGGGCAGCCCATTTT CACTTCGCTTGGGCAGTATCCCGCCGAACGCCTGGCCGAGCTTCAGACGGTCTATAGCTTTCCCAGCTATCGCTACGGCC AAGGCTACGGTGAACTGGGCACCGAAAAGCGATGGGAATTCAAAGACGACATCAGCTACGTCAGGGGTAATCACACCCTG AAATTCGGCTTCGACTTCAGCCGCATTCCTTTCGCCGATGACACCGTGATTAACTACCAGGGCACGTGGACCTTCGCAAC CGATCAACCTTTCAATCCGAAAGATCCCAGTACGATCGCGAATCTCACGAAGCCGACGCAGTTCACGGCTGCGATTCCGG GCCAGTATACGTCGGTGCCGGTTAACCAGTATGGCGCCTATATTCAGGACGATTGGAAAGTAACTCCGCGGTTTACCTTG AACCTGGGCCTGCGGTGGGATAAGGAAACGGGATCTTACAACGAAGGCGTCAATCCCACGTCGTTTCCACGAGCGATCCC GTACCTCGGCAACCCCGGCGACCGCGGACAGTCGCGCAATTTCGGGCCGCGCTTCGGCTTCGCATGGGATATCACGGGCG AGGCCAAGAACGTGGTGCGGGGCGGCTACGGCATCTACTACAACAACATCCAAACGCTGCTCAACTTCCCGGAGAACCGG AACATCTCGCAGTGCAATGTGCTGATCGTCAATCCCACATATCCCGACCCGTACGGCGGTAAGAGTCCGAGTTCGTTCTG TTCGAGCGCCGCGCCCACCGTCACGGTACTCGACCGGAATTTTGCCATGCCCTACTCGCAGCAGTTCACACTCGGCTACT CGCGGGAAATCGTCAGGGACTTTTCGATTCACCTGGACGGCGTCTATATGCACACCCTCAAGGACTGGCGCACGGTAGAT GTGAACTATCCCAATGCCGCGGGTGTGCGGCCGCTGCCGGACTTCGCGCGCATTCTGGATCACGAATCGATATCCCAGTA CAAATACCGCGGGTTGTATGTCCGCGCCGAGAAGCGATTCGCCAAACGCTACCAGTTCCTGGTGTCCTACACGCTGGCCT CGAACCGCGATGACAATCCGCAGGCCCAGGTCACCAACCAGGCGAGCTATAACCTGGATTGGGGTCCGGCGAATATCGAC CGCCGCCATGCGCTGGTCGCGAGCGGCTCCACGAACCTGCCCTGGAAATTCAATCTCGGCGTGATCTGGCAGGCTCGTTC GTCCCTGCCGTTCAGCGCCTTCTCAACGGTCCAGGTGGATGGCATCACCCAGTTCATTCCTGGGCTGGCGCGCAATATGG GGAACCGTAACAATGGCGCCGTCCTGGCCGCCGTGAATGCCTACCGCGCATCACTGCCTACGCCGCTGGCGCCCTTTACG GCCTCGCAGATCGATAGCAGCCGCTTCGACAGTTTCGATATCGTCATTTCGCGCCCCATTTATGTGCGTGAGAGTTTCCG GGTGGAAGCGAGGGGCCAGGCGTTCAATCTCTTTGGGACCACCAACCTGACCGGCGGCACCACCACATCGGCCAGTTCTG CAAACTTCGGTAAGATTTTGAACGCCAGCAATCTGCAGCAGGCCGAACTGGCCTTGCGGGTTGCATTCTAG
Upstream 100 bases:
>100_bases CACCGCGCGCGGGAGGCGCGGCGGAAAGCGGTCCGGCAAACGATAGGTAGTGACATTGCACCGAGTCGTGCGTCCGAACA TTAAACACTGGAGGGGATAA
Downstream 100 bases:
>100_bases ATCTTGTTACGCGGCGTACGGCAAGATACTGTTCGACTTAGTGTGGTCGATTTGCTCTTGACCTGTATCTGACCTGGCTA TATAGTTTCATTCAACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 956; Mature: 956
Protein sequence:
>956_residues MKVQKRPALWVLSAVVALLAPAAVSLAQVGDAELAGVVTDPSGAPVASAKLSLLNEDSGVNRALLTDAEGHYHFPALAPG RYSLKTEASGFRSSSLTGIVLNVGTHLETNVALIVGNVQEQVTVTAETPPIDTSKGDVSGVVTQQQIDTLPVNTRQYLNL ALLMPGTTQDASRTFYNNVQIGGGGRFYANGFVVDGVTNTWAEQGEPRQNFPEGAVQEFRINTNQFKAEQGLAMGGLVNV VTKSGTNHFHGEGFEYFRDSALNHDNKFTEQAFQSVGRTGKAPFRRNQFGGDIGGPIVKNKTHVYVAYERTQVDDSFTIF AAGSHQFYGANEGVIDKPSHDQMFNVRVDHSISNTQHAFARYSQEWNKQTWQGCGGTVESNCYDGLIPRHSFVGGHTWTA KPTLVNEFRFQYALASYLLGPSGQPIFTSLGQYPAERLAELQTVYSFPSYRYGQGYGELGTEKRWEFKDDISYVRGNHTL KFGFDFSRIPFADDTVINYQGTWTFATDQPFNPKDPSTIANLTKPTQFTAAIPGQYTSVPVNQYGAYIQDDWKVTPRFTL NLGLRWDKETGSYNEGVNPTSFPRAIPYLGNPGDRGQSRNFGPRFGFAWDITGEAKNVVRGGYGIYYNNIQTLLNFPENR NISQCNVLIVNPTYPDPYGGKSPSSFCSSAAPTVTVLDRNFAMPYSQQFTLGYSREIVRDFSIHLDGVYMHTLKDWRTVD VNYPNAAGVRPLPDFARILDHESISQYKYRGLYVRAEKRFAKRYQFLVSYTLASNRDDNPQAQVTNQASYNLDWGPANID RRHALVASGSTNLPWKFNLGVIWQARSSLPFSAFSTVQVDGITQFIPGLARNMGNRNNGAVLAAVNAYRASLPTPLAPFT ASQIDSSRFDSFDIVISRPIYVRESFRVEARGQAFNLFGTTNLTGGTTTSASSANFGKILNASNLQQAELALRVAF
Sequences:
>Translated_956_residues MKVQKRPALWVLSAVVALLAPAAVSLAQVGDAELAGVVTDPSGAPVASAKLSLLNEDSGVNRALLTDAEGHYHFPALAPG RYSLKTEASGFRSSSLTGIVLNVGTHLETNVALIVGNVQEQVTVTAETPPIDTSKGDVSGVVTQQQIDTLPVNTRQYLNL ALLMPGTTQDASRTFYNNVQIGGGGRFYANGFVVDGVTNTWAEQGEPRQNFPEGAVQEFRINTNQFKAEQGLAMGGLVNV VTKSGTNHFHGEGFEYFRDSALNHDNKFTEQAFQSVGRTGKAPFRRNQFGGDIGGPIVKNKTHVYVAYERTQVDDSFTIF AAGSHQFYGANEGVIDKPSHDQMFNVRVDHSISNTQHAFARYSQEWNKQTWQGCGGTVESNCYDGLIPRHSFVGGHTWTA KPTLVNEFRFQYALASYLLGPSGQPIFTSLGQYPAERLAELQTVYSFPSYRYGQGYGELGTEKRWEFKDDISYVRGNHTL KFGFDFSRIPFADDTVINYQGTWTFATDQPFNPKDPSTIANLTKPTQFTAAIPGQYTSVPVNQYGAYIQDDWKVTPRFTL NLGLRWDKETGSYNEGVNPTSFPRAIPYLGNPGDRGQSRNFGPRFGFAWDITGEAKNVVRGGYGIYYNNIQTLLNFPENR NISQCNVLIVNPTYPDPYGGKSPSSFCSSAAPTVTVLDRNFAMPYSQQFTLGYSREIVRDFSIHLDGVYMHTLKDWRTVD VNYPNAAGVRPLPDFARILDHESISQYKYRGLYVRAEKRFAKRYQFLVSYTLASNRDDNPQAQVTNQASYNLDWGPANID RRHALVASGSTNLPWKFNLGVIWQARSSLPFSAFSTVQVDGITQFIPGLARNMGNRNNGAVLAAVNAYRASLPTPLAPFT ASQIDSSRFDSFDIVISRPIYVRESFRVEARGQAFNLFGTTNLTGGTTTSASSANFGKILNASNLQQAELALRVAF >Mature_956_residues MKVQKRPALWVLSAVVALLAPAAVSLAQVGDAELAGVVTDPSGAPVASAKLSLLNEDSGVNRALLTDAEGHYHFPALAPG RYSLKTEASGFRSSSLTGIVLNVGTHLETNVALIVGNVQEQVTVTAETPPIDTSKGDVSGVVTQQQIDTLPVNTRQYLNL ALLMPGTTQDASRTFYNNVQIGGGGRFYANGFVVDGVTNTWAEQGEPRQNFPEGAVQEFRINTNQFKAEQGLAMGGLVNV VTKSGTNHFHGEGFEYFRDSALNHDNKFTEQAFQSVGRTGKAPFRRNQFGGDIGGPIVKNKTHVYVAYERTQVDDSFTIF AAGSHQFYGANEGVIDKPSHDQMFNVRVDHSISNTQHAFARYSQEWNKQTWQGCGGTVESNCYDGLIPRHSFVGGHTWTA KPTLVNEFRFQYALASYLLGPSGQPIFTSLGQYPAERLAELQTVYSFPSYRYGQGYGELGTEKRWEFKDDISYVRGNHTL KFGFDFSRIPFADDTVINYQGTWTFATDQPFNPKDPSTIANLTKPTQFTAAIPGQYTSVPVNQYGAYIQDDWKVTPRFTL NLGLRWDKETGSYNEGVNPTSFPRAIPYLGNPGDRGQSRNFGPRFGFAWDITGEAKNVVRGGYGIYYNNIQTLLNFPENR NISQCNVLIVNPTYPDPYGGKSPSSFCSSAAPTVTVLDRNFAMPYSQQFTLGYSREIVRDFSIHLDGVYMHTLKDWRTVD VNYPNAAGVRPLPDFARILDHESISQYKYRGLYVRAEKRFAKRYQFLVSYTLASNRDDNPQAQVTNQASYNLDWGPANID RRHALVASGSTNLPWKFNLGVIWQARSSLPFSAFSTVQVDGITQFIPGLARNMGNRNNGAVLAAVNAYRASLPTPLAPFT ASQIDSSRFDSFDIVISRPIYVRESFRVEARGQAFNLFGTTNLTGGTTTSASSANFGKILNASNLQQAELALRVAF
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 105489; Mature: 105489
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVQKRPALWVLSAVVALLAPAAVSLAQVGDAELAGVVTDPSGAPVASAKLSLLNEDSGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEEECCCCCC NRALLTDAEGHYHFPALAPGRYSLKTEASGFRSSSLTGIVLNVGTHLETNVALIVGNVQE CEEEEECCCCCEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCE QVTVTAETPPIDTSKGDVSGVVTQQQIDTLPVNTRQYLNLALLMPGTTQDASRTFYNNVQ EEEEEECCCCCCCCCCCCEEEEEHHHHCCCCCCCHHHEEEEEEECCCCCHHHHHHHCCEE IGGGGRFYANGFVVDGVTNTWAEQGEPRQNFPEGAVQEFRINTNQFKAEQGLAMGGLVNV ECCCCEEEECCEEEECCCHHHHHCCCCCCCCCCCCHHHEECCCHHHHHHCCCCCCCCEEE VTKSGTNHFHGEGFEYFRDSALNHDNKFTEQAFQSVGRTGKAPFRRNQFGGDIGGPIVKN EECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECC KTHVYVAYERTQVDDSFTIFAAGSHQFYGANEGVIDKPSHDQMFNVRVDHSISNTQHAFA CEEEEEEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH RYSQEWNKQTWQGCGGTVESNCYDGLIPRHSFVGGHTWTAKPTLVNEFRFQYALASYLLG HHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC PSGQPIFTSLGQYPAERLAELQTVYSFPSYRYGQGYGELGTEKRWEFKDDISYVRGNHTL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEE KFGFDFSRIPFADDTVINYQGTWTFATDQPFNPKDPSTIANLTKPTQFTAAIPGQYTSVP EECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCEECC VNQYGAYIQDDWKVTPRFTLNLGLRWDKETGSYNEGVNPTSFPRAIPYLGNPGDRGQSRN HHHCCCEEECCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGPRFGFAWDITGEAKNVVRGGYGIYYNNIQTLLNFPENRNISQCNVLIVNPTYPDPYGG CCCCCCEEEEECCCCHHHHCCCCEEEECCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC KSPSSFCSSAAPTVTVLDRNFAMPYSQQFTLGYSREIVRDFSIHLDGVYMHTLKDWRTVD CCHHHHHHCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHEEEECEEEEEECCCCEEEE VNYPNAAGVRPLPDFARILDHESISQYKYRGLYVRAEKRFAKRYQFLVSYTLASNRDDNP ECCCCCCCCCCCHHHHHHHCCCHHHHHEECEEEEEHHHHHHHHHHHHHEEEECCCCCCCC QAQVTNQASYNLDWGPANIDRRHALVASGSTNLPWKFNLGVIWQARSSLPFSAFSTVQVD CEEEECCCCEECCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCCCCCEEEEC GITQFIPGLARNMGNRNNGAVLAAVNAYRASLPTPLAPFTASQIDSSRFDSFDIVISRPI CHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECCE YVRESFRVEARGQAFNLFGTTNLTGGTTTSASSANFGKILNASNLQQAELALRVAF EEEECEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MKVQKRPALWVLSAVVALLAPAAVSLAQVGDAELAGVVTDPSGAPVASAKLSLLNEDSGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEEECCCCCC NRALLTDAEGHYHFPALAPGRYSLKTEASGFRSSSLTGIVLNVGTHLETNVALIVGNVQE CEEEEECCCCCEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCE QVTVTAETPPIDTSKGDVSGVVTQQQIDTLPVNTRQYLNLALLMPGTTQDASRTFYNNVQ EEEEEECCCCCCCCCCCCEEEEEHHHHCCCCCCCHHHEEEEEEECCCCCHHHHHHHCCEE IGGGGRFYANGFVVDGVTNTWAEQGEPRQNFPEGAVQEFRINTNQFKAEQGLAMGGLVNV ECCCCEEEECCEEEECCCHHHHHCCCCCCCCCCCCHHHEECCCHHHHHHCCCCCCCCEEE VTKSGTNHFHGEGFEYFRDSALNHDNKFTEQAFQSVGRTGKAPFRRNQFGGDIGGPIVKN EECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECC KTHVYVAYERTQVDDSFTIFAAGSHQFYGANEGVIDKPSHDQMFNVRVDHSISNTQHAFA CEEEEEEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH RYSQEWNKQTWQGCGGTVESNCYDGLIPRHSFVGGHTWTAKPTLVNEFRFQYALASYLLG HHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC PSGQPIFTSLGQYPAERLAELQTVYSFPSYRYGQGYGELGTEKRWEFKDDISYVRGNHTL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEE KFGFDFSRIPFADDTVINYQGTWTFATDQPFNPKDPSTIANLTKPTQFTAAIPGQYTSVP EECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCEECC VNQYGAYIQDDWKVTPRFTLNLGLRWDKETGSYNEGVNPTSFPRAIPYLGNPGDRGQSRN HHHCCCEEECCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGPRFGFAWDITGEAKNVVRGGYGIYYNNIQTLLNFPENRNISQCNVLIVNPTYPDPYGG CCCCCCEEEEECCCCHHHHCCCCEEEECCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC KSPSSFCSSAAPTVTVLDRNFAMPYSQQFTLGYSREIVRDFSIHLDGVYMHTLKDWRTVD CCHHHHHHCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHEEEECEEEEEECCCCEEEE VNYPNAAGVRPLPDFARILDHESISQYKYRGLYVRAEKRFAKRYQFLVSYTLASNRDDNP ECCCCCCCCCCCHHHHHHHCCCHHHHHEECEEEEEHHHHHHHHHHHHHEEEECCCCCCCC QAQVTNQASYNLDWGPANIDRRHALVASGSTNLPWKFNLGVIWQARSSLPFSAFSTVQVD CEEEECCCCEECCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCCCCCEEEEC GITQFIPGLARNMGNRNNGAVLAAVNAYRASLPTPLAPFTASQIDSSRFDSFDIVISRPI CHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECCE YVRESFRVEARGQAFNLFGTTNLTGGTTTSASSANFGKILNASNLQQAELALRVAF EEEECEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]