Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622167
Identifier: 116622167
GI number: 116622167
Start: 3858255
End: 3859145
Strand: Reverse
Name: 116622167
Synonym: Acid_3059
Alternate gene names: NA
Gene position: 3859145-3858255 (Counterclockwise)
Preceding gene: 116622168
Following gene: 116622166
Centisome position: 38.72
GC content: 59.82
Gene sequence:
>891_bases ATGCCACGCATAGACGTCAACAAGAAGCTTGCTGAGGCGCTGGATTCCCCTGATTTTCGGCGCGCGCTGTTGCAAGTCGC CCACCAGAAATCAACCCGGCCGGTCAGAACCGGCCATTGTGTGGTCGTGGAGATACCCGAGGCGGCCCAGCCCCACGATT TCTCCCCGATTGCGCCGGGGACCGTCACCGCGTTTGTCGCGCGCGAGGGCGAGCCGCTGCTGCACAACCTGACGGACGCC ATCGCAGGCAACAATAGCATGGCATTTAATGCAGCCACCGACCAGATCCAGCAGATGGCGGCGGAGCTTTCCCGCAAGCT GGCCGGAGCGCCACCCTATACCGATGCCCAGCGGCAAGCCTTCCCCTCGTTCGCCGAGATCAGCTACGCCAACAAAGCCT TGACCAGTCAAGTGTATGTGGACAATCTGTTGCCGGTCCATGTTCATACATTCCCGTACAACGGAGGCCAACTGGATAGT AAGTCTTTCTCGATGATGGAGTATTACCGGGCCGACGTGCACTCGCCTCTTACTTGCCTGTTGATCATTCGGCGGCCCAA GCTCGGTGAAATCGAGCGGGAAGCACTGCGATTGGTTCCCAGCGGATCCACGGCCAACAATATCGGCGCGGCGGTGGTGG CCCCAGTTACACCGGCATTGATGGCATTTATGGTAATTGCGGCCGAGGCGGCCGCCAGGTTTCTCTATAACGAACTCGTG AACCTCTGGCTCGCGTTCCTGTACGGCCCGACTACGGCTCTCTCGATTCCTGATGCGGTGCTGAAAGGCGAGCAGTTCCA GAAGATGCTCAAGTCCTTGCCGCCTGAGGTCACTGCCGCTGAACTGCTCCGGCTGCGCGCGGATATCCTTGTTCAGGGGC CGTCCAAGTGA
Upstream 100 bases:
>100_bases CGAGAAGTTCGCGGCGCGCTACGCCGCTGACCTGGAACTGTGGGGGACGCGCTCTTCTCAACCCCTTCTGATGAATTCGA AACACTAAGGAGGCCACCCG
Downstream 100 bases:
>100_bases TGTCGCACGCCGCCATCGTGGTCGTCACCCTCTACGTTCTCTGGGCCGCGGCCACGATCGCGAATCAGTTTCATGCCCGG TGCCCCACCTGGCTCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPRIDVNKKLAEALDSPDFRRALLQVAHQKSTRPVRTGHCVVVEIPEAAQPHDFSPIAPGTVTAFVAREGEPLLHNLTDA IAGNNSMAFNAATDQIQQMAAELSRKLAGAPPYTDAQRQAFPSFAEISYANKALTSQVYVDNLLPVHVHTFPYNGGQLDS KSFSMMEYYRADVHSPLTCLLIIRRPKLGEIEREALRLVPSGSTANNIGAAVVAPVTPALMAFMVIAAEAAARFLYNELV NLWLAFLYGPTTALSIPDAVLKGEQFQKMLKSLPPEVTAAELLRLRADILVQGPSK
Sequences:
>Translated_296_residues MPRIDVNKKLAEALDSPDFRRALLQVAHQKSTRPVRTGHCVVVEIPEAAQPHDFSPIAPGTVTAFVAREGEPLLHNLTDA IAGNNSMAFNAATDQIQQMAAELSRKLAGAPPYTDAQRQAFPSFAEISYANKALTSQVYVDNLLPVHVHTFPYNGGQLDS KSFSMMEYYRADVHSPLTCLLIIRRPKLGEIEREALRLVPSGSTANNIGAAVVAPVTPALMAFMVIAAEAAARFLYNELV NLWLAFLYGPTTALSIPDAVLKGEQFQKMLKSLPPEVTAAELLRLRADILVQGPSK >Mature_295_residues PRIDVNKKLAEALDSPDFRRALLQVAHQKSTRPVRTGHCVVVEIPEAAQPHDFSPIAPGTVTAFVAREGEPLLHNLTDAI AGNNSMAFNAATDQIQQMAAELSRKLAGAPPYTDAQRQAFPSFAEISYANKALTSQVYVDNLLPVHVHTFPYNGGQLDSK SFSMMEYYRADVHSPLTCLLIIRRPKLGEIEREALRLVPSGSTANNIGAAVVAPVTPALMAFMVIAAEAAARFLYNELVN LWLAFLYGPTTALSIPDAVLKGEQFQKMLKSLPPEVTAAELLRLRADILVQGPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32226; Mature: 32095
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIDVNKKLAEALDSPDFRRALLQVAHQKSTRPVRTGHCVVVEIPEAAQPHDFSPIAPG CCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC TVTAFVAREGEPLLHNLTDAIAGNNSMAFNAATDQIQQMAAELSRKLAGAPPYTDAQRQA HHEEEEECCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH FPSFAEISYANKALTSQVYVDNLLPVHVHTFPYNGGQLDSKSFSMMEYYRADVHSPLTCL CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEE LIIRRPKLGEIEREALRLVPSGSTANNIGAAVVAPVTPALMAFMVIAAEAAARFLYNELV EEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLWLAFLYGPTTALSIPDAVLKGEQFQKMLKSLPPEVTAAELLRLRADILVQGPSK HHHHHHHHCCCHHHCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCC >Mature Secondary Structure PRIDVNKKLAEALDSPDFRRALLQVAHQKSTRPVRTGHCVVVEIPEAAQPHDFSPIAPG CCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC TVTAFVAREGEPLLHNLTDAIAGNNSMAFNAATDQIQQMAAELSRKLAGAPPYTDAQRQA HHEEEEECCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH FPSFAEISYANKALTSQVYVDNLLPVHVHTFPYNGGQLDSKSFSMMEYYRADVHSPLTCL CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEE LIIRRPKLGEIEREALRLVPSGSTANNIGAAVVAPVTPALMAFMVIAAEAAARFLYNELV EEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLWLAFLYGPTTALSIPDAVLKGEQFQKMLKSLPPEVTAAELLRLRADILVQGPSK HHHHHHHHCCCHHHCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA