Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is ywzG [H]
Identifier: 116622161
GI number: 116622161
Start: 3850988
End: 3851314
Strand: Direct
Name: ywzG [H]
Synonym: Acid_3053
Alternate gene names: 116622161
Gene position: 3850988-3851314 (Clockwise)
Preceding gene: 116622160
Following gene: 116622162
Centisome position: 38.64
GC content: 58.1
Gene sequence:
>327_bases ATGGCCAAAACCGAGCTCGTGCCCGGAACCTTGATCCTGCTGGTGCTGCGCGTCCTGCAAACCGGTCCGCTGCATGGTTA TGCAATCGCGCAGCGCATCAGCCAACTTTCCAGCGATGTACTGCGGGTGGAAGAAGGCTCTCTGTACCCTGCGCTCCAGA AGATGCTCATGAAAGGATGGGTGCAGTCCGAATGGGAATTGTCGGAAACGAAACGCCGGGTTCGCTCCTATCGTCTGACC GCGGCCGGACGGAAACAATTGGCGGCCGAACTCGCCGGTTACGACCAGGTCAACCGCGCCATCCAATCCGTTCTAAAACT TGCATAG
Upstream 100 bases:
>100_bases AACGCGAACTCTCGCAACGACGCAGAGTAGCGCAAAGAAGAAAAGGTGCTTGACGAGTCCCAGGAGGCATAGGTAAACTA CACCTAGGGAACCTGATCCT
Downstream 100 bases:
>100_bases GGGAGACGGCATGAGGGAACTGCTGCGACGCATTGCCTACTTATGGAACCGCCGCCGCCTGGAAAGCGAAATGGCGGAGG AGATGGCCTACCATCGGGAA
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAKTELVPGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGWVQSEWELSETKRRVRSYRLT AAGRKQLAAELAGYDQVNRAIQSVLKLA
Sequences:
>Translated_108_residues MAKTELVPGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGWVQSEWELSETKRRVRSYRLT AAGRKQLAAELAGYDQVNRAIQSVLKLA >Mature_107_residues AKTELVPGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGWVQSEWELSETKRRVRSYRLTA AGRKQLAAELAGYDQVNRAIQSVLKLA
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 12078; Mature: 11947
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTELVPGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGW CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VQSEWELSETKRRVRSYRLTAAGRKQLAAELAGYDQVNRAIQSVLKLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure AKTELVPGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGW CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VQSEWELSETKRRVRSYRLTAAGRKQLAAELAGYDQVNRAIQSVLKLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]