Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622136
Identifier: 116622136
GI number: 116622136
Start: 3823781
End: 3824584
Strand: Direct
Name: 116622136
Synonym: Acid_3024
Alternate gene names: NA
Gene position: 3823781-3824584 (Clockwise)
Preceding gene: 116622135
Following gene: 116622140
Centisome position: 38.37
GC content: 57.84
Gene sequence:
>804_bases ATGAGGATGTTGCTCGTAGTGGCTCACCCGGATGATGAGATTCTTGGTGCCGGAATCTGGCTCCGCCGACACGCCGAATT CGAAACCCACCTCCTGCACATTACTGATGGCAGTCCACGCGATCTGCAGGACGCTCGTGCCGCGGGCTTTCATACCCGGC GGGCCTATGCGTTGGCGCGCAAACGGGAGCTGATACAGGCACTCGGCATGTTATCGATTCCGCGGGGTAATTGTCACGGC TGCGATTACGTTGACAAGGAGGCTTATCTAAATCTGCCCGCTGTAAGTCGGCAGATCGATCGATGGATTGAGACGTTGCG TCCATCTCTCGTGATCTCTCACGCCTATGAGGGCGGGCATCCTGATCACGATGCGGTGGCGTTCGCAGTCGCGATGGCGC GAAGGCGCGGGCGCCATTTTCAACACCTGGAGTTTCCGCTGTACCATGGCGGTCCGAACGGTGAGATGATCGCTGGTGAA TTCCTGACAGAATCCCAAGTGGAGCAATTGTTGGAGCTATCGCCGGCAGAGCGAAGGTTGAAATCACAAATGCTGGATTG TTTCCGGACGCAGGCGCACGTCATCCGACAGTTTCCTGTGAGCCGCGAGCGATTTCGTGATAGCCCGCATTATGATTTTT CCCAGGCGCCCCATCCCGGACCACTGCTCTACGAACGGTGGGGTTGGGGAATCCTGGGATCGGAGTGGAGGACCAAGGCC CGCGAAGCAGAAGACTATTTCTTCCGCGGCGACCTTCTGCGGAACCGGATGCCTTGCTCGAGTCAACTCGCCGATCACTC CTGA
Upstream 100 bases:
>100_bases AGCGCAAGCGCGTTTTTCCGCGAAAGCGATGGCAGAGAAGTACCTCTGCCTCTACGAGCGACTAATTCGAAAATACGCAG CGTAAAGGGGTTCTCGTCGA
Downstream 100 bases:
>100_bases GGCTGGTAACGCTGCTGCAGCTCTTTCTTGTTCGCGCGCACACGAGTCCATTCCTTCTGAGTCAGACAGGTAGGCCCCGA TTCCTCGTGGAAGAGCCCGA
Product: LmbE-like protein
Products: NA
Alternate protein names: LmbE-Like Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRMLLVVAHPDDEILGAGIWLRRHAEFETHLLHITDGSPRDLQDARAAGFHTRRAYALARKRELIQALGMLSIPRGNCHG CDYVDKEAYLNLPAVSRQIDRWIETLRPSLVISHAYEGGHPDHDAVAFAVAMARRRGRHFQHLEFPLYHGGPNGEMIAGE FLTESQVEQLLELSPAERRLKSQMLDCFRTQAHVIRQFPVSRERFRDSPHYDFSQAPHPGPLLYERWGWGILGSEWRTKA REAEDYFFRGDLLRNRMPCSSQLADHS
Sequences:
>Translated_267_residues MRMLLVVAHPDDEILGAGIWLRRHAEFETHLLHITDGSPRDLQDARAAGFHTRRAYALARKRELIQALGMLSIPRGNCHG CDYVDKEAYLNLPAVSRQIDRWIETLRPSLVISHAYEGGHPDHDAVAFAVAMARRRGRHFQHLEFPLYHGGPNGEMIAGE FLTESQVEQLLELSPAERRLKSQMLDCFRTQAHVIRQFPVSRERFRDSPHYDFSQAPHPGPLLYERWGWGILGSEWRTKA REAEDYFFRGDLLRNRMPCSSQLADHS >Mature_267_residues MRMLLVVAHPDDEILGAGIWLRRHAEFETHLLHITDGSPRDLQDARAAGFHTRRAYALARKRELIQALGMLSIPRGNCHG CDYVDKEAYLNLPAVSRQIDRWIETLRPSLVISHAYEGGHPDHDAVAFAVAMARRRGRHFQHLEFPLYHGGPNGEMIAGE FLTESQVEQLLELSPAERRLKSQMLDCFRTQAHVIRQFPVSRERFRDSPHYDFSQAPHPGPLLYERWGWGILGSEWRTKA REAEDYFFRGDLLRNRMPCSSQLADHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30754; Mature: 30754
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLLVVAHPDDEILGAGIWLRRHAEFETHLLHITDGSPRDLQDARAAGFHTRRAYALAR CEEEEEEECCCCCHHHCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHH KRELIQALGMLSIPRGNCHGCDYVDKEAYLNLPAVSRQIDRWIETLRPSLVISHAYEGGH HHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCHHHEEEECCCCCC PDHDAVAFAVAMARRRGRHFQHLEFPLYHGGPNGEMIAGEFLTESQVEQLLELSPAERRL CCHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCEEEHHHHHHHHHHHHHHCCHHHHHH KSQMLDCFRTQAHVIRQFPVSRERFRDSPHYDFSQAPHPGPLLYERWGWGILGSEWRTKA HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHH REAEDYFFRGDLLRNRMPCSSQLADHS HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRMLLVVAHPDDEILGAGIWLRRHAEFETHLLHITDGSPRDLQDARAAGFHTRRAYALAR CEEEEEEECCCCCHHHCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHH KRELIQALGMLSIPRGNCHGCDYVDKEAYLNLPAVSRQIDRWIETLRPSLVISHAYEGGH HHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCHHHEEEECCCCCC PDHDAVAFAVAMARRRGRHFQHLEFPLYHGGPNGEMIAGEFLTESQVEQLLELSPAERRL CCHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCEEEHHHHHHHHHHHHHHCCHHHHHH KSQMLDCFRTQAHVIRQFPVSRERFRDSPHYDFSQAPHPGPLLYERWGWGILGSEWRTKA HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHH REAEDYFFRGDLLRNRMPCSSQLADHS HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA