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The map label for this gene is yhcS [H]

Identifier: 116622115

GI number: 116622115

Start: 3799547

End: 3800089

Strand: Direct

Name: yhcS [H]

Synonym: Acid_3003

Alternate gene names: 116622115

Gene position: 3799547-3800089 (Clockwise)

Preceding gene: 116622114

Following gene: 116622116

Centisome position: 38.13

GC content: 60.59

Gene sequence:

>543_bases
ATGCGAGGAGGAGCTGGACTGCTCCTGTTGGGCGCGGCCACGTGCCTGTTGGGAGCTGTATTGGGCGTTCTGGCTTGGAC
AGGACAGGATGCTGCACGGGCCGACTGGGAGGCGCGGACTGAAGATGGGCGCCCCGCGGACGCCCCGCAGGAACTCACAC
GTCTTTCGCTTCCCGCGCAAGGCGCCGATTTCTTTGTGTGGGAGGGCGCCACGAAGAAGAACTTATTGTTCGGGCCGGTA
CATGTCTCGGAATCCGCGGCTCCCGGCGGGAATGGCAATTGTATCATCGCCGCTCACCGCGACACCCATTTCCGGATCTT
GCGGGAGGTCCGGAAGGATGAACCAATTGTGGTGGAGCATGGCGGCCACGTATTCAGGTACCGGATCACGGGGCTGCACA
TCGTAAGTGCGGCGGACAAGACGTACTACAGGCCGACCACGGGGCCCACACTCACCTTGGTCACTTGTTATCCCTTTGTT
TATGTAGGCAGGGCTCCCAAGCGATTCATCGTTCAAGCTGAGTTGCTTACGCCCGCCAGTTAA

Upstream 100 bases:

>100_bases
TGGTCTCGGCTGGGTGGAAGTGATGGCGGCGGGAATCGCAATGACCACCGCGGGCTTGTTCTTGCACAAGCGCGAGGCTC
GCAGGAGCTAAGTAGTTCCC

Downstream 100 bases:

>100_bases
GGTCTTCAGAGAAAACAGTTGGTCAAACGCGATCTAAACCAAAGGTCATTTCAGGAGGTTAGTCTATGGTTCGTAAGTCT
ATCTTCACGGGGCTGGTGGT

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRGGAGLLLLGAATCLLGAVLGVLAWTGQDAARADWEARTEDGRPADAPQELTRLSLPAQGADFFVWEGATKKNLLFGPV
HVSESAAPGGNGNCIIAAHRDTHFRILREVRKDEPIVVEHGGHVFRYRITGLHIVSAADKTYYRPTTGPTLTLVTCYPFV
YVGRAPKRFIVQAELLTPAS

Sequences:

>Translated_180_residues
MRGGAGLLLLGAATCLLGAVLGVLAWTGQDAARADWEARTEDGRPADAPQELTRLSLPAQGADFFVWEGATKKNLLFGPV
HVSESAAPGGNGNCIIAAHRDTHFRILREVRKDEPIVVEHGGHVFRYRITGLHIVSAADKTYYRPTTGPTLTLVTCYPFV
YVGRAPKRFIVQAELLTPAS
>Mature_180_residues
MRGGAGLLLLGAATCLLGAVLGVLAWTGQDAARADWEARTEDGRPADAPQELTRLSLPAQGADFFVWEGATKKNLLFGPV
HVSESAAPGGNGNCIIAAHRDTHFRILREVRKDEPIVVEHGGHVFRYRITGLHIVSAADKTYYRPTTGPTLTLVTCYPFV
YVGRAPKRFIVQAELLTPAS

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 19419; Mature: 19419

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGAGLLLLGAATCLLGAVLGVLAWTGQDAARADWEARTEDGRPADAPQELTRLSLPAQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCC
GADFFVWEGATKKNLLFGPVHVSESAAPGGNGNCIIAAHRDTHFRILREVRKDEPIVVEH
CCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEC
GGHVFRYRITGLHIVSAADKTYYRPTTGPTLTLVTCYPFVYVGRAPKRFIVQAELLTPAS
CCEEEEEEEEEEEEEEECCCCEECCCCCCEEEEEEECCEEEECCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MRGGAGLLLLGAATCLLGAVLGVLAWTGQDAARADWEARTEDGRPADAPQELTRLSLPAQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCC
GADFFVWEGATKKNLLFGPVHVSESAAPGGNGNCIIAAHRDTHFRILREVRKDEPIVVEH
CCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEC
GGHVFRYRITGLHIVSAADKTYYRPTTGPTLTLVTCYPFVYVGRAPKRFIVQAELLTPAS
CCEEEEEEEEEEEEEEECCCCEECCCCCCEEEEEEECCEEEECCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]