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The map label for this gene is ydaO [H]

Identifier: 116622111

GI number: 116622111

Start: 3794519

End: 3796384

Strand: Direct

Name: ydaO [H]

Synonym: Acid_2999

Alternate gene names: 116622111

Gene position: 3794519-3796384 (Clockwise)

Preceding gene: 116622110

Following gene: 116622113

Centisome position: 38.08

GC content: 63.02

Gene sequence:

>1866_bases
ATGCTCCTCCTCGATCGCCTCCTTGGCAGACCGCTCCCCTCCGCGGAGGCCGGAGAACAGAAGGTCGGCGCCACCATCGG
CGTCGCGGTTTTTGGACTGGATGCGCTAGGCTCCACTGCGTACGGTCCCGAGGCGGCGCTCACCATGCTCCTTCCGCTCG
GCGCGGCCGCTTCCTATTGGGTGGTTCCCATCAGTTTCTCGATCATCCTGCTGCTCGCGATCGTCGCCTTTTCCTACCTG
CAGACGATCCCTGCTTACCCTGGAGGCGGCGGATCTTATCAGGTGGCGGGTCAAAATCTGGGCCCCTCCGCGGGCTTACT
CGCCGCCTCGGCCCTGATGATCGATTACCTGCTCACGGTAGCGGTAGGCATCTCCGCCGGAGTCGGCGCTCTCGTTTCGG
CCGTTCCCAAACTCCAGCCGCACACGCTTACTCTGGGGTTGTTTCTTCTTGTACTGATCGCGATTGTCAATCTGCGCGGT
TTGAGGGAGAGCGGAGCCATCCTCGCCGTTCCCACCTACCTTTTTGTAGCGTGTATGTTCGGCGTTCTTGGCTGGGGATT
GTGGAAAGGCCTGGCCGCCGACGGACATCCGGTCACGGTCGCGCGCCTGCATCCGCCCGGCGCCGCCCATCGTGCGAGTG
CGTGGCTGTTACTCAAAGCGTTCGCCGCGGGTTGCACGGCGATGACGGGCGTGGAGGCGGTAAGCAACGGTGTGAGTGCC
TTCACCGAACCGCGCACCCGAACCGCCCGGCGCACACTGATGCTGATTGTCGGTATTCTTGCTCTCCTGCTCGCGGCCGT
CGCGTGGTTGTGCCGCATGTACCAGATAGGCGCAACTGAACCAGGTAGGGCGGGCTATGAAAACGTCCTCTCGCAGTTGG
CTGGAGCCATCGCCGGCAAAGGAGGTCTCTACTACGTGACCATGGCTTCCATCCTCCTGGTGCTCGCCCTACAGGCTGAT
ACCGCTTTCGCCGGCTTCCCGCGTCTCTGCTGCATTCTAGCCCGCGACCAGTACCTTCCGAGGGCGTTTTCCGTCCGCGG
ACGCCGCCTCGTATATTCCTATGGCATTGTGCTTCTTGCGCTGCTCTCCGGGGGCCTTCTGATCCTGTTCGGGGGCGTCA
CGGACCGTCTAATTCCTCTCTTCGCCATCGGCGCGTTCCTCGCGTTCACGCTGTCGCAGGCCGGTATGGTCCGGCATTGG
ATGCGCGAGAAAAGCCAGCACTCCGGACATAGCGCCATCGTGAATGGCGTGGGGGCGGCCGCCACCGCAATCGCGCTCGC
GATCATCGTGGTCTCTAAATTCAGCGACGGTGCATGGGCCGCGCTGCTGGTAATTCCAGGGCTCGTGGTCCTGATGCGTT
CCATCCGCGCGCACCGCCTCCGCCTGTCTCAAGAACTCACTGCGGCGGAACAGTTACCTGTAGATTGTCTGTGCCCGCCG
CTGGTCGTCGTCCCCATGGACGCATGGGACAAGGCCGCGCAGCGCGCGCTTCGCTTCGGAATGTCGATCTCGCAGACCGT
CTTCGCCCTGCACATCGATGCCGACAATCAGGGCCGTGAGATCAAGCGGCACTGGACTGATTGGGTGGAGAAGCCGGCCC
GGCGGCACGGTCTGCGCCCGCCCGAACTGATCGTAGTGCCGTCCCCCTATCGCGTGGTAGTACAGGCCGTTGTGGACTAC
GTGCTGGAACTCCAGCGCACAAATCCCGATGGCCACATCGCGGTAATCGTGCCCACCGTGGTCGAACGCCGATGGTATCG
TCGCTTTCTGCACAACCAGCGCGGCGAGTTGCTGACCGCGCTCCTGCTGTTAAACGGACAGCCCCGGATTTCGATCGTAA
ACGTTCCATGGCGCCCGCACTGCTGA

Upstream 100 bases:

>100_bases
ATCCTTGGCCGGCGAACTCGTGAGCGGGATTGTGAACACCCTCACGCGCTCCTCTTTTTGGTCGGCGGTTGGTATCACTC
CTGCTCCGCTCTACCGAGAC

Downstream 100 bases:

>100_bases
TTTTACGCGCCTGCAATCTTGCAATTGCGCTGCGTACCTGCTACGCGACCGGGGTCGTGGAGTTGGCCTGGAAGCGCGCC
ACCTCCGCGTACCAGGGATT

Product: putative aminoacid/polyamine transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MLLLDRLLGRPLPSAEAGEQKVGATIGVAVFGLDALGSTAYGPEAALTMLLPLGAAASYWVVPISFSIILLLAIVAFSYL
QTIPAYPGGGGSYQVAGQNLGPSAGLLAASALMIDYLLTVAVGISAGVGALVSAVPKLQPHTLTLGLFLLVLIAIVNLRG
LRESGAILAVPTYLFVACMFGVLGWGLWKGLAADGHPVTVARLHPPGAAHRASAWLLLKAFAAGCTAMTGVEAVSNGVSA
FTEPRTRTARRTLMLIVGILALLLAAVAWLCRMYQIGATEPGRAGYENVLSQLAGAIAGKGGLYYVTMASILLVLALQAD
TAFAGFPRLCCILARDQYLPRAFSVRGRRLVYSYGIVLLALLSGGLLILFGGVTDRLIPLFAIGAFLAFTLSQAGMVRHW
MREKSQHSGHSAIVNGVGAAATAIALAIIVVSKFSDGAWAALLVIPGLVVLMRSIRAHRLRLSQELTAAEQLPVDCLCPP
LVVVPMDAWDKAAQRALRFGMSISQTVFALHIDADNQGREIKRHWTDWVEKPARRHGLRPPELIVVPSPYRVVVQAVVDY
VLELQRTNPDGHIAVIVPTVVERRWYRRFLHNQRGELLTALLLLNGQPRISIVNVPWRPHC

Sequences:

>Translated_621_residues
MLLLDRLLGRPLPSAEAGEQKVGATIGVAVFGLDALGSTAYGPEAALTMLLPLGAAASYWVVPISFSIILLLAIVAFSYL
QTIPAYPGGGGSYQVAGQNLGPSAGLLAASALMIDYLLTVAVGISAGVGALVSAVPKLQPHTLTLGLFLLVLIAIVNLRG
LRESGAILAVPTYLFVACMFGVLGWGLWKGLAADGHPVTVARLHPPGAAHRASAWLLLKAFAAGCTAMTGVEAVSNGVSA
FTEPRTRTARRTLMLIVGILALLLAAVAWLCRMYQIGATEPGRAGYENVLSQLAGAIAGKGGLYYVTMASILLVLALQAD
TAFAGFPRLCCILARDQYLPRAFSVRGRRLVYSYGIVLLALLSGGLLILFGGVTDRLIPLFAIGAFLAFTLSQAGMVRHW
MREKSQHSGHSAIVNGVGAAATAIALAIIVVSKFSDGAWAALLVIPGLVVLMRSIRAHRLRLSQELTAAEQLPVDCLCPP
LVVVPMDAWDKAAQRALRFGMSISQTVFALHIDADNQGREIKRHWTDWVEKPARRHGLRPPELIVVPSPYRVVVQAVVDY
VLELQRTNPDGHIAVIVPTVVERRWYRRFLHNQRGELLTALLLLNGQPRISIVNVPWRPHC
>Mature_621_residues
MLLLDRLLGRPLPSAEAGEQKVGATIGVAVFGLDALGSTAYGPEAALTMLLPLGAAASYWVVPISFSIILLLAIVAFSYL
QTIPAYPGGGGSYQVAGQNLGPSAGLLAASALMIDYLLTVAVGISAGVGALVSAVPKLQPHTLTLGLFLLVLIAIVNLRG
LRESGAILAVPTYLFVACMFGVLGWGLWKGLAADGHPVTVARLHPPGAAHRASAWLLLKAFAAGCTAMTGVEAVSNGVSA
FTEPRTRTARRTLMLIVGILALLLAAVAWLCRMYQIGATEPGRAGYENVLSQLAGAIAGKGGLYYVTMASILLVLALQAD
TAFAGFPRLCCILARDQYLPRAFSVRGRRLVYSYGIVLLALLSGGLLILFGGVTDRLIPLFAIGAFLAFTLSQAGMVRHW
MREKSQHSGHSAIVNGVGAAATAIALAIIVVSKFSDGAWAALLVIPGLVVLMRSIRAHRLRLSQELTAAEQLPVDCLCPP
LVVVPMDAWDKAAQRALRFGMSISQTVFALHIDADNQGREIKRHWTDWVEKPARRHGLRPPELIVVPSPYRVVVQAVVDY
VLELQRTNPDGHIAVIVPTVVERRWYRRFLHNQRGELLTALLLLNGQPRISIVNVPWRPHC

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66315; Mature: 66315

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLDRLLGRPLPSAEAGEQKVGATIGVAVFGLDALGSTAYGPEAALTMLLPLGAAASYW
CCHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEE
VVPISFSIILLLAIVAFSYLQTIPAYPGGGGSYQVAGQNLGPSAGLLAASALMIDYLLTV
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
AVGISAGVGALVSAVPKLQPHTLTLGLFLLVLIAIVNLRGLRESGAILAVPTYLFVACMF
HHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHH
GVLGWGLWKGLAADGHPVTVARLHPPGAAHRASAWLLLKAFAAGCTAMTGVEAVSNGVSA
HHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHH
FTEPRTRTARRTLMLIVGILALLLAAVAWLCRMYQIGATEPGRAGYENVLSQLAGAIAGK
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
GGLYYVTMASILLVLALQADTAFAGFPRLCCILARDQYLPRAFSVRGRRLVYSYGIVLLA
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHH
LLSGGLLILFGGVTDRLIPLFAIGAFLAFTLSQAGMVRHWMREKSQHSGHSAIVNGVGAA
HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ATAIALAIIVVSKFSDGAWAALLVIPGLVVLMRSIRAHRLRLSQELTAAEQLPVDCLCPP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
LVVVPMDAWDKAAQRALRFGMSISQTVFALHIDADNQGREIKRHWTDWVEKPARRHGLRP
EEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC
PELIVVPSPYRVVVQAVVDYVLELQRTNPDGHIAVIVPTVVERRWYRRFLHNQRGELLTA
CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHH
LLLLNGQPRISIVNVPWRPHC
HHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MLLLDRLLGRPLPSAEAGEQKVGATIGVAVFGLDALGSTAYGPEAALTMLLPLGAAASYW
CCHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEE
VVPISFSIILLLAIVAFSYLQTIPAYPGGGGSYQVAGQNLGPSAGLLAASALMIDYLLTV
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
AVGISAGVGALVSAVPKLQPHTLTLGLFLLVLIAIVNLRGLRESGAILAVPTYLFVACMF
HHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHH
GVLGWGLWKGLAADGHPVTVARLHPPGAAHRASAWLLLKAFAAGCTAMTGVEAVSNGVSA
HHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHH
FTEPRTRTARRTLMLIVGILALLLAAVAWLCRMYQIGATEPGRAGYENVLSQLAGAIAGK
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
GGLYYVTMASILLVLALQADTAFAGFPRLCCILARDQYLPRAFSVRGRRLVYSYGIVLLA
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHH
LLSGGLLILFGGVTDRLIPLFAIGAFLAFTLSQAGMVRHWMREKSQHSGHSAIVNGVGAA
HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ATAIALAIIVVSKFSDGAWAALLVIPGLVVLMRSIRAHRLRLSQELTAAEQLPVDCLCPP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
LVVVPMDAWDKAAQRALRFGMSISQTVFALHIDADNQGREIKRHWTDWVEKPARRHGLRP
EEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC
PELIVVPSPYRVVVQAVVDYVLELQRTNPDGHIAVIVPTVVERRWYRRFLHNQRGELLTA
CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHH
LLLLNGQPRISIVNVPWRPHC
HHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]