Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622093
Identifier: 116622093
GI number: 116622093
Start: 3762135
End: 3763358
Strand: Direct
Name: 116622093
Synonym: Acid_2980
Alternate gene names: NA
Gene position: 3762135-3763358 (Clockwise)
Preceding gene: 116622092
Following gene: 116622095
Centisome position: 37.75
GC content: 60.87
Gene sequence:
>1224_bases ATGAAGAAAAGATTCGCTCTCCTCCTGATCGCCGCCGTCGCGCTGGTTTCCGGCGCTAAGAAACCCGGCGATGACACCAG CAATCCCGCGTACGCCGTGGTCCCGTTCCCCATGACGGCCGACCCCAGCGGCAAGCCCGGCAAGGCCGTATTCAAGCATC CCGGAGTCCTTCTCAACCGCGCCCAGCTCGCCGAAATCAAACGCCGTGTGGACGCCGGAATCGAGCCGCAGAAGTCCGCC TTCGAAGCGTTGAAAGCCAGCAAACTCGCCGCGCCCGATTACACTCCACATCCCCGCGAAACCGTCGAGTGCGGTTCGAA CTCCAATCCCGACCTCGGCTGCAAGGCCGAGCAGGCCGATAGCGAAGCCGCCTACGCGCAGGCACTCATGTGGGCCATCA CCGGCAGCAAAGCGCACGCCGAAACCGCCATCAGAATCATGAATGCCTGGTCGTCAACCCTGACCGGCGGCCACACCAAT AACAACGGCCCCGTCCAGGCCTCGTGGACCGGCGACGTCTGGCCGCGCGCCGCCGAGATCATTCGCTACAGCTATAAGGG CTGGCCCGATGCCGAAATCGCAAAGTTCCAAAACATGCTCACCACGCAGTACCTGCCTTCCATCGTCAAGGGCACCTGCG AAAACGGCAACAAGGAACTCACCATGAGTGAGGCCCTGATTAACATCGGCGTTTTCAACGACAATCGCGCGGTCTTCGAT CTCGGCGTTAAAATGTGGCGCGGTCGCACCCCCGCTTACATCTATCTGAAGTCCGATGGACCCAAACCCATCGAGCCTCC CGGCTGTGGCGTTGCGCTGTGGGGGAATAAGGGGTATACGCCCGAGTTCGTGGACGGACTCTTGCAGGAGACCGCGCGCG ATTCCGGCCACGCCAACCTTGCCCTCTCCGGCATGGTGGACGCAGCCGAGACCGCATACCAGCAGGGTGTCGACCTCTAC GCCGAACAAGGCAAGCGCATCATGGCCGCTATGGAATTTCAGGCGCAGTACCTCGCACCCAATAACGTCAAACCTCCGGA GAATCTGGAATTCAATCTCCACCCCACCTGGGAAATCGCCTATAACCACTTTCACGACCGGCTGGGCAAGCAATTGCCGA AAATGGCCGCCGTGCTTCCCACCAATCGGCCCACGGGAGTGAATCACCACATGAATTGGGAGACGCTGACCCACGCGGGC ATGGGTAACATCGGCGTTCGCTGA
Upstream 100 bases:
>100_bases CTCTCAATGCCGCGCGTCTCGGCGAAGCGCCCACCGGACCCATCCAACTTCAAGAGCACGGCATGCCCGTTCAATTCCGC AACATCTGGATTTTGGAACA
Downstream 100 bases:
>100_bases AAAAGCGAGCTCAGTTGCGCAGCGGACGCGCGTAGATGATTTCGAATCTGCGCGCCAACCCACCCAAACGGCTGCCCTTC AGAAGGACTTCAAAGTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Glycoside Hydrolase Family; Exopolysaccharide Inner Membrane Protein; Glycosyl Hydrolase Protein; LamG Domain-Containing Protein; Glycoside Hydrolase Family Protein; 16S RRNA Dimethylase; GPI Anchored Protein; Fibronectin Type III Domain Protein; Coagulation Factor 5/8 Type Domain-Containing Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKKRFALLLIAAVALVSGAKKPGDDTSNPAYAVVPFPMTADPSGKPGKAVFKHPGVLLNRAQLAEIKRRVDAGIEPQKSA FEALKASKLAAPDYTPHPRETVECGSNSNPDLGCKAEQADSEAAYAQALMWAITGSKAHAETAIRIMNAWSSTLTGGHTN NNGPVQASWTGDVWPRAAEIIRYSYKGWPDAEIAKFQNMLTTQYLPSIVKGTCENGNKELTMSEALINIGVFNDNRAVFD LGVKMWRGRTPAYIYLKSDGPKPIEPPGCGVALWGNKGYTPEFVDGLLQETARDSGHANLALSGMVDAAETAYQQGVDLY AEQGKRIMAAMEFQAQYLAPNNVKPPENLEFNLHPTWEIAYNHFHDRLGKQLPKMAAVLPTNRPTGVNHHMNWETLTHAG MGNIGVR
Sequences:
>Translated_407_residues MKKRFALLLIAAVALVSGAKKPGDDTSNPAYAVVPFPMTADPSGKPGKAVFKHPGVLLNRAQLAEIKRRVDAGIEPQKSA FEALKASKLAAPDYTPHPRETVECGSNSNPDLGCKAEQADSEAAYAQALMWAITGSKAHAETAIRIMNAWSSTLTGGHTN NNGPVQASWTGDVWPRAAEIIRYSYKGWPDAEIAKFQNMLTTQYLPSIVKGTCENGNKELTMSEALINIGVFNDNRAVFD LGVKMWRGRTPAYIYLKSDGPKPIEPPGCGVALWGNKGYTPEFVDGLLQETARDSGHANLALSGMVDAAETAYQQGVDLY AEQGKRIMAAMEFQAQYLAPNNVKPPENLEFNLHPTWEIAYNHFHDRLGKQLPKMAAVLPTNRPTGVNHHMNWETLTHAG MGNIGVR >Mature_407_residues MKKRFALLLIAAVALVSGAKKPGDDTSNPAYAVVPFPMTADPSGKPGKAVFKHPGVLLNRAQLAEIKRRVDAGIEPQKSA FEALKASKLAAPDYTPHPRETVECGSNSNPDLGCKAEQADSEAAYAQALMWAITGSKAHAETAIRIMNAWSSTLTGGHTN NNGPVQASWTGDVWPRAAEIIRYSYKGWPDAEIAKFQNMLTTQYLPSIVKGTCENGNKELTMSEALINIGVFNDNRAVFD LGVKMWRGRTPAYIYLKSDGPKPIEPPGCGVALWGNKGYTPEFVDGLLQETARDSGHANLALSGMVDAAETAYQQGVDLY AEQGKRIMAAMEFQAQYLAPNNVKPPENLEFNLHPTWEIAYNHFHDRLGKQLPKMAAVLPTNRPTGVNHHMNWETLTHAG MGNIGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44295; Mature: 44295
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFALLLIAAVALVSGAKKPGDDTSNPAYAVVPFPMTADPSGKPGKAVFKHPGVLLNR CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHCCH AQLAEIKRRVDAGIEPQKSAFEALKASKLAAPDYTPHPRETVECGSNSNPDLGCKAEQAD HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC SEAAYAQALMWAITGSKAHAETAIRIMNAWSSTLTGGHTNNNGPVQASWTGDVWPRAAEI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH IRYSYKGWPDAEIAKFQNMLTTQYLPSIVKGTCENGNKELTMSEALINIGVFNDNRAVFD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHEEEEEEECCCCEEEE LGVKMWRGRTPAYIYLKSDGPKPIEPPGCGVALWGNKGYTPEFVDGLLQETARDSGHANL HHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCE ALSGMVDAAETAYQQGVDLYAEQGKRIMAAMEFQAQYLAPNNVKPPENLEFNLHPTWEIA EEECCHHHHHHHHHHCHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCEEECCCCHHHH YNHFHDRLGKQLPKMAAVLPTNRPTGVNHHMNWETLTHAGMGNIGVR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MKKRFALLLIAAVALVSGAKKPGDDTSNPAYAVVPFPMTADPSGKPGKAVFKHPGVLLNR CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHCCH AQLAEIKRRVDAGIEPQKSAFEALKASKLAAPDYTPHPRETVECGSNSNPDLGCKAEQAD HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC SEAAYAQALMWAITGSKAHAETAIRIMNAWSSTLTGGHTNNNGPVQASWTGDVWPRAAEI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH IRYSYKGWPDAEIAKFQNMLTTQYLPSIVKGTCENGNKELTMSEALINIGVFNDNRAVFD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHEEEEEEECCCCEEEE LGVKMWRGRTPAYIYLKSDGPKPIEPPGCGVALWGNKGYTPEFVDGLLQETARDSGHANL HHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCE ALSGMVDAAETAYQQGVDLYAEQGKRIMAAMEFQAQYLAPNNVKPPENLEFNLHPTWEIA EEECCHHHHHHHHHHCHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCEEECCCCHHHH YNHFHDRLGKQLPKMAAVLPTNRPTGVNHHMNWETLTHAGMGNIGVR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA