Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622091
Identifier: 116622091
GI number: 116622091
Start: 3760123
End: 3761067
Strand: Direct
Name: 116622091
Synonym: Acid_2978
Alternate gene names: NA
Gene position: 3760123-3761067 (Clockwise)
Preceding gene: 116622090
Following gene: 116622092
Centisome position: 37.73
GC content: 62.43
Gene sequence:
>945_bases ATGAATCGTAGAAACTTTCTCCAGGGCCTTTCGCTCCTCCCCCTATCCGGCCTTGCCGCCGCCGCGCCGCAGGCGTCCAA GAAAAAGGCCGCCGTCCTCAGGACGTCGCTTAACGCCTACTCCTTTAACGTGCTGCTGAACGACGCGATCCGTGGCCGCG GCGAAGGCACCACCCTGATGAAGCTCCTCGATTTCGCATCGAAGAACAAGTTCGACGCGTTCGACGCGACCGGCTATTAC TTCCCCGGCTACCCGGCCGTGCCGTCGAACGACTATATAGACGGCCTGAAGAAAAAGGCGGCCGACCTCGGCATCGCGAT CAGCGGCACCGGCGTTCGCAACAACTTCACCACCGCCGACGCGGCTGTCCGCCAACAGGGCGTCGATCACATCAAGCAGT ACGTCGAAGTCGCTGCCCGCCTGGGCGCGCCCGTCATCCGCGTCTTCGCCGACACGCAGATGCGCGCCGAGAATTGGGAG TCCGTGTCCAAAGGCGCGACCCGCACACAAGTCCAGGATTGGATCGTCGCCAACCTCCGCGAATGCGCCGACCACGCCTC GAAATTCAAAGTCAAAATCGGCGTACAGAACCATGGCGACTTTCTCAAGACCGGCCAGGAACAGCTGGCGCTCATCAAAG CCGTCGGCTCGCCATGGTGCGGTCCCATCGTGGACACCGGCTACTACAAAACTCCCGACCCCTACGCCGATTTCGCTCTC GTGGCGCCCACTGCCGTCAACTGGCAGGTGAAGCAGAGTCCGCTCGGCGAGGAAAGCGAGGTTCCCACGGACCTCATCAA GCTCCTCAAAATCGTCCGCGCCTCCGGCTACTCCGGCTACCTGCCGATAGAAACCCTTTCGCCGCGCGGCAAGGCGTACG ACCCGTATACCGTCGTCCCGGCTTTTCTCGCCCAGCTCCGCGAAGCCATCGCCAAGACCGCATAG
Upstream 100 bases:
>100_bases CTCACTGCCGAACAGTGGACCAAACTCCAGGAACTCCGCGCCGAACGCAAAGCCCAGGGTAAGGGCGGCGCCAAGAAGAA GAAATAACGTGGACATCCAT
Downstream 100 bases:
>100_bases GAAGCCATCATGAGATACGTTACGTTCATCGTCGGACTCTGTTGCATGGGCGCCATCGTCTTTTGCGCGCCGCAGGACAC TGGCAAGAAAGGCGGTAAGG
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Xylose Isomerase-Like Protein; F5/8 Type C Domain Protein
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNRRNFLQGLSLLPLSGLAAAAPQASKKKAAVLRTSLNAYSFNVLLNDAIRGRGEGTTLMKLLDFASKNKFDAFDATGYY FPGYPAVPSNDYIDGLKKKAADLGIAISGTGVRNNFTTADAAVRQQGVDHIKQYVEVAARLGAPVIRVFADTQMRAENWE SVSKGATRTQVQDWIVANLRECADHASKFKVKIGVQNHGDFLKTGQEQLALIKAVGSPWCGPIVDTGYYKTPDPYADFAL VAPTAVNWQVKQSPLGEESEVPTDLIKLLKIVRASGYSGYLPIETLSPRGKAYDPYTVVPAFLAQLREAIAKTA
Sequences:
>Translated_314_residues MNRRNFLQGLSLLPLSGLAAAAPQASKKKAAVLRTSLNAYSFNVLLNDAIRGRGEGTTLMKLLDFASKNKFDAFDATGYY FPGYPAVPSNDYIDGLKKKAADLGIAISGTGVRNNFTTADAAVRQQGVDHIKQYVEVAARLGAPVIRVFADTQMRAENWE SVSKGATRTQVQDWIVANLRECADHASKFKVKIGVQNHGDFLKTGQEQLALIKAVGSPWCGPIVDTGYYKTPDPYADFAL VAPTAVNWQVKQSPLGEESEVPTDLIKLLKIVRASGYSGYLPIETLSPRGKAYDPYTVVPAFLAQLREAIAKTA >Mature_314_residues MNRRNFLQGLSLLPLSGLAAAAPQASKKKAAVLRTSLNAYSFNVLLNDAIRGRGEGTTLMKLLDFASKNKFDAFDATGYY FPGYPAVPSNDYIDGLKKKAADLGIAISGTGVRNNFTTADAAVRQQGVDHIKQYVEVAARLGAPVIRVFADTQMRAENWE SVSKGATRTQVQDWIVANLRECADHASKFKVKIGVQNHGDFLKTGQEQLALIKAVGSPWCGPIVDTGYYKTPDPYADFAL VAPTAVNWQVKQSPLGEESEVPTDLIKLLKIVRASGYSGYLPIETLSPRGKAYDPYTVVPAFLAQLREAIAKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34073; Mature: 34073
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRNFLQGLSLLPLSGLAAAAPQASKKKAAVLRTSLNAYSFNVLLNDAIRGRGEGTTLM CCHHHHHHCCHHCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCHHHH KLLDFASKNKFDAFDATGYYFPGYPAVPSNDYIDGLKKKAADLGIAISGTGVRNNFTTAD HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHH AAVRQQGVDHIKQYVEVAARLGAPVIRVFADTQMRAENWESVSKGATRTQVQDWIVANLR HHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH ECADHASKFKVKIGVQNHGDFLKTGQEQLALIKAVGSPWCGPIVDTGYYKTPDPYADFAL HHHHHHHHEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VAPTAVNWQVKQSPLGEESEVPTDLIKLLKIVRASGYSGYLPIETLSPRGKAYDPYTVVP ECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH AFLAQLREAIAKTA HHHHHHHHHHHHCC >Mature Secondary Structure MNRRNFLQGLSLLPLSGLAAAAPQASKKKAAVLRTSLNAYSFNVLLNDAIRGRGEGTTLM CCHHHHHHCCHHCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCHHHH KLLDFASKNKFDAFDATGYYFPGYPAVPSNDYIDGLKKKAADLGIAISGTGVRNNFTTAD HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHH AAVRQQGVDHIKQYVEVAARLGAPVIRVFADTQMRAENWESVSKGATRTQVQDWIVANLR HHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH ECADHASKFKVKIGVQNHGDFLKTGQEQLALIKAVGSPWCGPIVDTGYYKTPDPYADFAL HHHHHHHHEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VAPTAVNWQVKQSPLGEESEVPTDLIKLLKIVRASGYSGYLPIETLSPRGKAYDPYTVVP ECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH AFLAQLREAIAKTA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA