Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is yqkF [H]
Identifier: 116622089
GI number: 116622089
Start: 3758771
End: 3759754
Strand: Direct
Name: yqkF [H]
Synonym: Acid_2976
Alternate gene names: 116622089
Gene position: 3758771-3759754 (Clockwise)
Preceding gene: 116622088
Following gene: 116622090
Centisome position: 37.72
GC content: 60.98
Gene sequence:
>984_bases ATGAGCATCACTCGACGCAGATTTCTCGAAACCGCCGCGGTCACCGGAATCGCAGCAGGCACGCTCGCAGCCGACCCCGG CAAGACTGCGCTACCCACCCGTGTACTGGGCAAAACCGGCGTGCGCGTCTCCATCCTCGCCTTCGGAACCGGCAGCCGCT TCCTCATGTACAAGGAAGAGGACGCCGCGCTCGAAGCTCTTACGCGCGCGCTCGATTCCGGCATTACCTACATCGATACC GCCGACGAGTATGGCAAGGGCCACCTCGCCGAGCAGCGTGTCGGCAAGGTGCTCAAAGGGCGGCGCGACAGCGTATTCCT CGCTACCAAAGTCAGCCCGCGCGACGGAGCCGAAGCCGCGCGCTCCTTCGAGGAGAGCCTGAAAGCCCTGCAGGTCGATC GCGTCGATCTGCTCCATATCCACGCACTCACCACGGAAGACGATCTCGCCAAAATCGAAGCCAAAGGTGGTGTCCTCGAA CAGGTCCTCAAATTCCGCGAGCAGAAAATGGCACGCTTCATCGGCATCACCAGTCACGCAGACCCCGCAGTGATGAAGAC CGCGCTCGAGCGCCACGATTTCGATTGCACCCAAATGGCGCTTAACGCCGGTATGGCGAACATGATCAACGGGGGCGGCA AGCGCGGTATGGTCCCCAACCCCGCCGTGCAGACCAGCTTCGAATCCCTTGCCCTGCCGGTAGCGCTCCGGAAGAAGATG GGAATTCTCGCGATCAAAGCGTTCGCGCAGGATGCCCTGATCGGTCAGGCTGCGCCCGAAAAGCTGCTGACCTACACACT CTCCCTGCCCATCACCGCCGCCGTTGTCGGCATGCCCAAGCTTGAGCATATCGATTCCAATGTGCGCATTGCCAAAGCTT TCGTCCCCATGCCTCCGGCAGAAATGAGAGAGCTCGCCGGACGCCTCTCCGAAAAGAACAAGGTGGCGCTCGACGAATTC TTTCGCCATCATCTCGATGCATAG
Upstream 100 bases:
>100_bases TCTGCCGGCTGTTAACCTCGATAAATCCAACGCCGGGACCATCACCAAAGCCAAGGCCGCGCGCGTCATGCAACTCGGAC TGCGGCTGGAGTTCTAAAAC
Downstream 100 bases:
>100_bases ACTTGGAGCAAACATGAAGATACTCGCAGCTCTGATCCTCGCCGCCGCGCTGTTCGCCGCCCCGCAGTCCGGTCCGCGTT CGCAAATACAGAATATGGTC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSITRRRFLETAAVTGIAAGTLAADPGKTALPTRVLGKTGVRVSILAFGTGSRFLMYKEEDAALEALTRALDSGITYIDT ADEYGKGHLAEQRVGKVLKGRRDSVFLATKVSPRDGAEAARSFEESLKALQVDRVDLLHIHALTTEDDLAKIEAKGGVLE QVLKFREQKMARFIGITSHADPAVMKTALERHDFDCTQMALNAGMANMINGGGKRGMVPNPAVQTSFESLALPVALRKKM GILAIKAFAQDALIGQAAPEKLLTYTLSLPITAAVVGMPKLEHIDSNVRIAKAFVPMPPAEMRELAGRLSEKNKVALDEF FRHHLDA
Sequences:
>Translated_327_residues MSITRRRFLETAAVTGIAAGTLAADPGKTALPTRVLGKTGVRVSILAFGTGSRFLMYKEEDAALEALTRALDSGITYIDT ADEYGKGHLAEQRVGKVLKGRRDSVFLATKVSPRDGAEAARSFEESLKALQVDRVDLLHIHALTTEDDLAKIEAKGGVLE QVLKFREQKMARFIGITSHADPAVMKTALERHDFDCTQMALNAGMANMINGGGKRGMVPNPAVQTSFESLALPVALRKKM GILAIKAFAQDALIGQAAPEKLLTYTLSLPITAAVVGMPKLEHIDSNVRIAKAFVPMPPAEMRELAGRLSEKNKVALDEF FRHHLDA >Mature_326_residues SITRRRFLETAAVTGIAAGTLAADPGKTALPTRVLGKTGVRVSILAFGTGSRFLMYKEEDAALEALTRALDSGITYIDTA DEYGKGHLAEQRVGKVLKGRRDSVFLATKVSPRDGAEAARSFEESLKALQVDRVDLLHIHALTTEDDLAKIEAKGGVLEQ VLKFREQKMARFIGITSHADPAVMKTALERHDFDCTQMALNAGMANMINGGGKRGMVPNPAVQTSFESLALPVALRKKMG ILAIKAFAQDALIGQAAPEKLLTYTLSLPITAAVVGMPKLEHIDSNVRIAKAFVPMPPAEMRELAGRLSEKNKVALDEFF RHHLDA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=206, Percent_Identity=33.0097087378641, Blast_Score=69, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646155, Length=174, Percent_Identity=36.2068965517241, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24646159, Length=179, Percent_Identity=33.5195530726257, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35375; Mature: 35243
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITRRRFLETAAVTGIAAGTLAADPGKTALPTRVLGKTGVRVSILAFGTGSRFLMYKEE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCEEEEEECH DAALEALTRALDSGITYIDTADEYGKGHLAEQRVGKVLKGRRDSVFLATKVSPRDGAEAA HHHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH RSFEESLKALQVDRVDLLHIHALTTEDDLAKIEAKGGVLEQVLKFREQKMARFIGITSHA HHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC DPAVMKTALERHDFDCTQMALNAGMANMINGGGKRGMVPNPAVQTSFESLALPVALRKKM CHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GILAIKAFAQDALIGQAAPEKLLTYTLSLPITAAVVGMPKLEHIDSNVRIAKAFVPMPPA CHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHHHHCCCHHHHCCCCCEEEEEECCCCCH EMRELAGRLSEKNKVALDEFFRHHLDA HHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SITRRRFLETAAVTGIAAGTLAADPGKTALPTRVLGKTGVRVSILAFGTGSRFLMYKEE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCEEEEEECH DAALEALTRALDSGITYIDTADEYGKGHLAEQRVGKVLKGRRDSVFLATKVSPRDGAEAA HHHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH RSFEESLKALQVDRVDLLHIHALTTEDDLAKIEAKGGVLEQVLKFREQKMARFIGITSHA HHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC DPAVMKTALERHDFDCTQMALNAGMANMINGGGKRGMVPNPAVQTSFESLALPVALRKKM CHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GILAIKAFAQDALIGQAAPEKLLTYTLSLPITAAVVGMPKLEHIDSNVRIAKAFVPMPPA CHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHHHHCCCHHHHCCCCCEEEEEECCCCCH EMRELAGRLSEKNKVALDEFFRHHLDA HHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]