Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622085
Identifier: 116622085
GI number: 116622085
Start: 3749537
End: 3750814
Strand: Reverse
Name: 116622085
Synonym: Acid_2972
Alternate gene names: NA
Gene position: 3750814-3749537 (Counterclockwise)
Preceding gene: 116622094
Following gene: 116622081
Centisome position: 37.64
GC content: 60.95
Gene sequence:
>1278_bases ATGTCTCAGGTGAACGTCGTCAAGCCAACCGAAGATCGCAAAATGCTGGTTGAGCGGGTCGCTTCCAGCCGTTACGTGAA TCGCTCCGCGAGGCTACGCGACCTGCTTGTGTACCTTTCTTCGCGGGTGCTGGAAGAAGACGTTGATGAGATTCACGAGC AAGAGGTTGGCTACAAGGTGTTCGGCCGGGCGGCGAACTATGACACGAGCAGCGACAACATCGTCAGAGTTCACGCGTCC ATGCTGCGGAAACGCCTGGAGCAGTACTTTGCCGAAGAAGGTGCGAGCGAGCCGCTGGTAATCGAGATCCCCAAAGGCAA TTATGCGCCGGTGTTCCGGGAGCGGGGATACGCGGCGCAGCCTCCGCTGGTAACGCCAGAACTGCCGGCAACTGCCGCGA GAGCGACGGACCGCAGGTTCTGGGCTTTGGGACTGGCGGCGGGTTTGTTTGCCTGCACCACGGCGTATCTGGTGATGCGC GGTGCTCCGTCCCTGGGCGGAGATGAGGCGCGCCGGCCGAACGTGACGCTATTCTGGTCGCAGGTTTTCGAGAGGAATCG GGCAACCGACATCGTTTTAGACGACGCGGCGATCGCCCTATACCAGGAGCTAACTGGACGCACGCTTTCGCTCTCGGACT ACTACGACCGCAGCTATTTGCGGACGCTGCCGGAGAGTGCGGCAGGGAGCGCCAGTCTGGACGCGCAGACCATAAGTTCG GTGGCGCTGCGCAGGCAGTCGAGCTTCGCGGATATCAGTTTTGTATGGAAACTGATGCAGATTCCAGGCGCCAGCCGCCG GCCTTCCACGCTGCGATTCGCGCGCGACTACTCCTTCCGGGATCTGAAGGCGAACAACGCCGTACTGGTCGGAAACAGCC GCTCCAATCCCTGGGTGGAACCGTTCGAGCCAAAGATGGGAATCCGCTGGACTTTCGACAAAGCGGCGGCCGTCTACGAT CCGGTGGATACGTGGACCGGAAAGAGCTTTCAGGCGCGAAATCCGGGTGATCAGCGCGAGAGCTTCTTTTCGGTCGCGCT GCTTCCTAATTTGGGAGGCACGGGCAACGTTCTGATCATCTCAGGAACGGGCGGCAGCGCAATCAACGCCGGCGCTGATT TCCTGGCGGACGAGGCAGCCATGTCCAGTCTTCGGCGCCAGTTGCCCACGAAAGCGGACCATCCTTTTCCGCATTTCGAG GCACTGATCAAGGTGAAGGGCCGCAGCTCCGTGCCGCGCGACGCCACCGTTCTGCTTTGCCGTCCACCCAAGCCGTAA
Upstream 100 bases:
>100_bases GCTAGAGCCCTTCTTGCATTTATTTTCAATGGCTTAGGGCACGAGATTTTACGTAAAGACATCGGAACAGGGGCGCTATA ATGGGGGAAACAGGGTTCGA
Downstream 100 bases:
>100_bases GCAGTGGCAGGTTCAGCAGGCATAGGCGTTTGCGAACCTTCACGACCGTATACTCCAGCGAACTCCCTTTACTCCGTTTT CTTTCAGTTGTCAGCTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSQVNVVKPTEDRKMLVERVASSRYVNRSARLRDLLVYLSSRVLEEDVDEIHEQEVGYKVFGRAANYDTSSDNIVRVHAS MLRKRLEQYFAEEGASEPLVIEIPKGNYAPVFRERGYAAQPPLVTPELPATAARATDRRFWALGLAAGLFACTTAYLVMR GAPSLGGDEARRPNVTLFWSQVFERNRATDIVLDDAAIALYQELTGRTLSLSDYYDRSYLRTLPESAAGSASLDAQTISS VALRRQSSFADISFVWKLMQIPGASRRPSTLRFARDYSFRDLKANNAVLVGNSRSNPWVEPFEPKMGIRWTFDKAAAVYD PVDTWTGKSFQARNPGDQRESFFSVALLPNLGGTGNVLIISGTGGSAINAGADFLADEAAMSSLRRQLPTKADHPFPHFE ALIKVKGRSSVPRDATVLLCRPPKP
Sequences:
>Translated_425_residues MSQVNVVKPTEDRKMLVERVASSRYVNRSARLRDLLVYLSSRVLEEDVDEIHEQEVGYKVFGRAANYDTSSDNIVRVHAS MLRKRLEQYFAEEGASEPLVIEIPKGNYAPVFRERGYAAQPPLVTPELPATAARATDRRFWALGLAAGLFACTTAYLVMR GAPSLGGDEARRPNVTLFWSQVFERNRATDIVLDDAAIALYQELTGRTLSLSDYYDRSYLRTLPESAAGSASLDAQTISS VALRRQSSFADISFVWKLMQIPGASRRPSTLRFARDYSFRDLKANNAVLVGNSRSNPWVEPFEPKMGIRWTFDKAAAVYD PVDTWTGKSFQARNPGDQRESFFSVALLPNLGGTGNVLIISGTGGSAINAGADFLADEAAMSSLRRQLPTKADHPFPHFE ALIKVKGRSSVPRDATVLLCRPPKP >Mature_424_residues SQVNVVKPTEDRKMLVERVASSRYVNRSARLRDLLVYLSSRVLEEDVDEIHEQEVGYKVFGRAANYDTSSDNIVRVHASM LRKRLEQYFAEEGASEPLVIEIPKGNYAPVFRERGYAAQPPLVTPELPATAARATDRRFWALGLAAGLFACTTAYLVMRG APSLGGDEARRPNVTLFWSQVFERNRATDIVLDDAAIALYQELTGRTLSLSDYYDRSYLRTLPESAAGSASLDAQTISSV ALRRQSSFADISFVWKLMQIPGASRRPSTLRFARDYSFRDLKANNAVLVGNSRSNPWVEPFEPKMGIRWTFDKAAAVYDP VDTWTGKSFQARNPGDQRESFFSVALLPNLGGTGNVLIISGTGGSAINAGADFLADEAAMSSLRRQLPTKADHPFPHFEA LIKVKGRSSVPRDATVLLCRPPKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47090; Mature: 46959
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVNVVKPTEDRKMLVERVASSRYVNRSARLRDLLVYLSSRVLEEDVDEIHEQEVGYKV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FGRAANYDTSSDNIVRVHASMLRKRLEQYFAEEGASEPLVIEIPKGNYAPVFRERGYAAQ HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCC PPLVTPELPATAARATDRRFWALGLAAGLFACTTAYLVMRGAPSLGGDEARRPNVTLFWS CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHH QVFERNRATDIVLDDAAIALYQELTGRTLSLSDYYDRSYLRTLPESAAGSASLDAQTISS HHHHCCCCCEEEECHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VALRRQSSFADISFVWKLMQIPGASRRPSTLRFARDYSFRDLKANNAVLVGNSRSNPWVE HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCEEEEECCCCCCCCC PFEPKMGIRWTFDKAAAVYDPVDTWTGKSFQARNPGDQRESFFSVALLPNLGGTGNVLII CCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCEEEE SGTGGSAINAGADFLADEAAMSSLRRQLPTKADHPFPHFEALIKVKGRSSVPRDATVLLC ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEECCCCCCCCCCEEEEE RPPKP CCCCC >Mature Secondary Structure SQVNVVKPTEDRKMLVERVASSRYVNRSARLRDLLVYLSSRVLEEDVDEIHEQEVGYKV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FGRAANYDTSSDNIVRVHASMLRKRLEQYFAEEGASEPLVIEIPKGNYAPVFRERGYAAQ HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCC PPLVTPELPATAARATDRRFWALGLAAGLFACTTAYLVMRGAPSLGGDEARRPNVTLFWS CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHH QVFERNRATDIVLDDAAIALYQELTGRTLSLSDYYDRSYLRTLPESAAGSASLDAQTISS HHHHCCCCCEEEECHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VALRRQSSFADISFVWKLMQIPGASRRPSTLRFARDYSFRDLKANNAVLVGNSRSNPWVE HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCEEEEECCCCCCCCC PFEPKMGIRWTFDKAAAVYDPVDTWTGKSFQARNPGDQRESFFSVALLPNLGGTGNVLII CCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCEEEE SGTGGSAINAGADFLADEAAMSSLRRQLPTKADHPFPHFEALIKVKGRSSVPRDATVLLC ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEECCCCCCCCCCEEEEE RPPKP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA