Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116622072

Identifier: 116622072

GI number: 116622072

Start: 3736977

End: 3737906

Strand: Reverse

Name: 116622072

Synonym: Acid_2959

Alternate gene names: NA

Gene position: 3737906-3736977 (Counterclockwise)

Preceding gene: 116622073

Following gene: 116622071

Centisome position: 37.51

GC content: 55.59

Gene sequence:

>930_bases
GTGCCTATTCGTAAATTCGGCAATTCTGTTACGTATACCGATGACCACATCTCCCATAGCAAGACCGAGTTCGCGTTCGA
TGTGTTTCAGGCGTCGAGAGGCCGGTATGCCTCGGAAGGCTACAAGGATTTTGTCGGCTTCCAGGTATCTAAGCGCGTCC
TGCAACAGGCGTTTCTAGACACCCATGGAATGAAGTTGGAACACGTCTTCCTGAAACGTAGACCTGGCGATCGGGTCGTA
CCGTCGCCCGGTGGGACCCATACTTCGCTCGCTCACCAAAGTCGAGTGGCAAATCAAAGGGCAGGAGATTCGCAAGGAAC
TTCCGGGTCTCACCCGCAAGGAATTTTCTACAACTTGTCCCGCTCGAGTTTCGAGAAAACATGGGGATCAACGTACCAGC
GGCCGGGCTTCGGGTCGCGCGTACTGGCCACGCTCTTCCGTATCGTGCCCCGCATCGGCCCGTTCAAAGCGCTGGCATTC
GAGCCACTCACCGCCGAAACGGAAAAGCTGTACATGGCAGGGTTTAACGCATCGATTGATCGACATCGCGAACTACTGGG
CTCGGTGGGCGCGGGCCGGCTGAATTTGCCAAACGACAATTTCGATGTGGGAGATGCAACCAAGGCGGGCAGCTATCGCC
TGACGGACGCCGCATATGCCAAGCTGTTGCACCAGCTCGATGGTCATTACCCCGAGTTGCCCAAAGAACTCCGTACCAAC
ATTCTGGCGTTCTACCAGGATCTCGGGCTGCCCATATCCACCAAAAAGGACGAAAGCGACTGGTTGCGGTTGCAGGACGA
ACTCGATCGCCTGCGGACGATCAATCAATCGACAACTTCAGGCGCAAGCCCCGCGAGTCGCCGCAGAGCAGCCCGTCAAG
TGAAAGGAGACTTACTGTGTCCTTCGGAATCTATGTCTTTGGTTATTTGA

Upstream 100 bases:

>100_bases
GAGGCCATAGTCAACTTCACCTGGGACAGCGGGATCCGGCCGCTGCTGGTGAAACGATTCCCCACCTGCACGGCGGACGA
ATTGCGCGCGGCACACGGCT

Downstream 100 bases:

>100_bases
TTGTGATCGGCGGCCTTACCTACGGCGCAATGCTAATGCATGTGCCGACACACTGGATTGTGGCCGGCGCACTGGTGCTC
ACCGTAATCGCGGCGGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPIRKFGNSVTYTDDHISHSKTEFAFDVFQASRGRYASEGYKDFVGFQVSKRVLQQAFLDTHGMKLEHVFLKRRPGDRVV
PSPGGTHTSLAHQSRVANQRAGDSQGTSGSHPQGIFYNLSRSSFEKTWGSTYQRPGFGSRVLATLFRIVPRIGPFKALAF
EPLTAETEKLYMAGFNASIDRHRELLGSVGAGRLNLPNDNFDVGDATKAGSYRLTDAAYAKLLHQLDGHYPELPKELRTN
ILAFYQDLGLPISTKKDESDWLRLQDELDRLRTINQSTTSGASPASRRRAARQVKGDLLCPSESMSLVI

Sequences:

>Translated_309_residues
MPIRKFGNSVTYTDDHISHSKTEFAFDVFQASRGRYASEGYKDFVGFQVSKRVLQQAFLDTHGMKLEHVFLKRRPGDRVV
PSPGGTHTSLAHQSRVANQRAGDSQGTSGSHPQGIFYNLSRSSFEKTWGSTYQRPGFGSRVLATLFRIVPRIGPFKALAF
EPLTAETEKLYMAGFNASIDRHRELLGSVGAGRLNLPNDNFDVGDATKAGSYRLTDAAYAKLLHQLDGHYPELPKELRTN
ILAFYQDLGLPISTKKDESDWLRLQDELDRLRTINQSTTSGASPASRRRAARQVKGDLLCPSESMSLVI
>Mature_308_residues
PIRKFGNSVTYTDDHISHSKTEFAFDVFQASRGRYASEGYKDFVGFQVSKRVLQQAFLDTHGMKLEHVFLKRRPGDRVVP
SPGGTHTSLAHQSRVANQRAGDSQGTSGSHPQGIFYNLSRSSFEKTWGSTYQRPGFGSRVLATLFRIVPRIGPFKALAFE
PLTAETEKLYMAGFNASIDRHRELLGSVGAGRLNLPNDNFDVGDATKAGSYRLTDAAYAKLLHQLDGHYPELPKELRTNI
LAFYQDLGLPISTKKDESDWLRLQDELDRLRTINQSTTSGASPASRRRAARQVKGDLLCPSESMSLVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34412; Mature: 34281

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRKFGNSVTYTDDHISHSKTEFAFDVFQASRGRYASEGYKDFVGFQVSKRVLQQAFLD
CCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
THGMKLEHVFLKRRPGDRVVPSPGGTHTSLAHQSRVANQRAGDSQGTSGSHPQGIFYNLS
HCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
RSSFEKTWGSTYQRPGFGSRVLATLFRIVPRIGPFKALAFEPLTAETEKLYMAGFNASID
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHEEECCCCCHH
RHRELLGSVGAGRLNLPNDNFDVGDATKAGSYRLTDAAYAKLLHQLDGHYPELPKELRTN
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHH
ILAFYQDLGLPISTKKDESDWLRLQDELDRLRTINQSTTSGASPASRRRAARQVKGDLLC
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
PSESMSLVI
CCCCCEECC
>Mature Secondary Structure 
PIRKFGNSVTYTDDHISHSKTEFAFDVFQASRGRYASEGYKDFVGFQVSKRVLQQAFLD
CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
THGMKLEHVFLKRRPGDRVVPSPGGTHTSLAHQSRVANQRAGDSQGTSGSHPQGIFYNLS
HCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
RSSFEKTWGSTYQRPGFGSRVLATLFRIVPRIGPFKALAFEPLTAETEKLYMAGFNASID
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHEEECCCCCHH
RHRELLGSVGAGRLNLPNDNFDVGDATKAGSYRLTDAAYAKLLHQLDGHYPELPKELRTN
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHH
ILAFYQDLGLPISTKKDESDWLRLQDELDRLRTINQSTTSGASPASRRRAARQVKGDLLC
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
PSESMSLVI
CCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA