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The map label for this gene is yhcS [H]

Identifier: 116622065

GI number: 116622065

Start: 3731815

End: 3732411

Strand: Reverse

Name: yhcS [H]

Synonym: Acid_2952

Alternate gene names: 116622065

Gene position: 3732411-3731815 (Counterclockwise)

Preceding gene: 116622066

Following gene: 116622061

Centisome position: 37.45

GC content: 60.3

Gene sequence:

>597_bases
GTGAGGCTGCTGTTCCAGCGCTCGGCGGTCAACAGGATTCTGAGGCGGAGCCAGAGAACACTCTTGACTTGTGCTCTCCT
GGCGCTAGGTTACTGCGGCTTTGTTACGTTCGATTCGTGGAACTTCCAGCGGACTGAACTGCGCGAACTAGACCGGGGTC
CGAGTGCCGGCCCGCCGGCCGTCTCGCAAGGTTCCAGTCTCCTGCCGGAGGCGATGGTCGGCCGCATTGAAGTCCGTCGG
CTGGGGCTTTCGGCGATGGTGGTCGAGGGGACCACGACGGCGGACCTGAGGCGCGCGGCCGGCCACATTTCCGGGACGGG
AATGCCCGGGTTTGCTGGAAATGTGGGCATTGCCGCCCACCGGGACACGTTTTTTCGGCCGTTAAGAAATGTCCGCAAGA
ACGACATCATCACACTGACCACCTCAAACGCAGAATATCGATACCGGGTTGTCTCCACGAAAGTAGTTGATCCCGGCGAT
GTATCCGTGCTCGATGCGAGCGACGGAGAGGTCCTCACGCTGGTGACTTGTTATCCGTTCTACTTCGTCGGGTCCGCGCC
CGATCGGTTTATCGTGAGGGCTGAGAGGATCATTTGA

Upstream 100 bases:

>100_bases
TTAACGTACTGGCACGAGGCTCCGCGAAGGCTAAGCTCTCTGTCCGAACCCGGTCGGGATACTCCAACGGGAGCGCATCG
GGTCACAAGGGCGGCGAGCG

Downstream 100 bases:

>100_bases
AGTAACTGACAGGACTGTGCGAATGACGAACTTTGATCTTCGATCCGCTCCAACTGCACCGGTAAAATGTGAATGCGGCT
GACCCGTTTGACGATTCGCT

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRLLFQRSAVNRILRRSQRTLLTCALLALGYCGFVTFDSWNFQRTELRELDRGPSAGPPAVSQGSSLLPEAMVGRIEVRR
LGLSAMVVEGTTTADLRRAAGHISGTGMPGFAGNVGIAAHRDTFFRPLRNVRKNDIITLTTSNAEYRYRVVSTKVVDPGD
VSVLDASDGEVLTLVTCYPFYFVGSAPDRFIVRAERII

Sequences:

>Translated_198_residues
MRLLFQRSAVNRILRRSQRTLLTCALLALGYCGFVTFDSWNFQRTELRELDRGPSAGPPAVSQGSSLLPEAMVGRIEVRR
LGLSAMVVEGTTTADLRRAAGHISGTGMPGFAGNVGIAAHRDTFFRPLRNVRKNDIITLTTSNAEYRYRVVSTKVVDPGD
VSVLDASDGEVLTLVTCYPFYFVGSAPDRFIVRAERII
>Mature_198_residues
MRLLFQRSAVNRILRRSQRTLLTCALLALGYCGFVTFDSWNFQRTELRELDRGPSAGPPAVSQGSSLLPEAMVGRIEVRR
LGLSAMVVEGTTTADLRRAAGHISGTGMPGFAGNVGIAAHRDTFFRPLRNVRKNDIITLTTSNAEYRYRVVSTKVVDPGD
VSVLDASDGEVLTLVTCYPFYFVGSAPDRFIVRAERII

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 21783; Mature: 21783

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLFQRSAVNRILRRSQRTLLTCALLALGYCGFVTFDSWNFQRTELRELDRGPSAGPPA
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCCCCCCC
VSQGSSLLPEAMVGRIEVRRLGLSAMVVEGTTTADLRRAAGHISGTGMPGFAGNVGIAAH
CCCCCCCCHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEC
RDTFFRPLRNVRKNDIITLTTSNAEYRYRVVSTKVVDPGDVSVLDASDGEVLTLVTCYPF
CHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEEEECCE
YFVGSAPDRFIVRAERII
EEECCCCCCEEEEEECCC
>Mature Secondary Structure
MRLLFQRSAVNRILRRSQRTLLTCALLALGYCGFVTFDSWNFQRTELRELDRGPSAGPPA
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCCCCCCC
VSQGSSLLPEAMVGRIEVRRLGLSAMVVEGTTTADLRRAAGHISGTGMPGFAGNVGIAAH
CCCCCCCCHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEC
RDTFFRPLRNVRKNDIITLTTSNAEYRYRVVSTKVVDPGDVSVLDASDGEVLTLVTCYPF
CHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEEEECCE
YFVGSAPDRFIVRAERII
EEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]