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The map label for this gene is ytfE [C]

Identifier: 116622037

GI number: 116622037

Start: 3703119

End: 3703856

Strand: Direct

Name: ytfE [C]

Synonym: Acid_2922

Alternate gene names: 116622037

Gene position: 3703119-3703856 (Clockwise)

Preceding gene: 116622036

Following gene: 116622038

Centisome position: 37.16

GC content: 59.35

Gene sequence:

>738_bases
ATGGAAGAGAAGGAACAAGGAGATCCGATGACAACAACCATGACTTTGGCCGATCTGGCCGCCAACTCATTGAACGCCGT
ACGCATTCTGGAACAACACGGCCTGGATTACTGCTGCGGCGGAAAGCAACCATTTGAAGACGCATGCTTGGCGAAGGGAA
TCAAGCCGGAGTCCATCCTGCGCGAGATCGAGGAGGCGCAGGTTGCAACTGTCGCTGGCAGAGACTGGCACACGGCGCCG
CTGGATGAGCTGGTGAAGCACATTGTTGGAACGCACCACGAGTACCTGAAGCTGGATCTGCCTGTCTTGGCGCACCGCAT
GGAGAAAGTGGCCTCGGTCCACGGCGCCCGCGACCCGAAAGTGCTCCCTCGCATGGCGGAAGTATTCGCGGGCTTGCGTG
CCGAGATGGAAATGCACATGCACAAAGAGGAAACCATCCTGTTTCCCTTCATCGAGCAGCACGGTCGCGCCGAGGTGCAG
AACCGGCCGGTGCCGCCGGTGCCATTTGGAACGATCGCCAACCCCATCGCGATGATGGAGCGCGAGCATGCCGGCGCTGG
GGACGCCCTCGGCGAGATCCGCAGCTTGACCAACGATTTCGAGTTGCCGCCTTACGCTTGCAGCACGGTTCGCGCGCTAT
ATGAAGGGCTGAAGGTGCTGGAAGCAGATCTGCACGTCCACATCCACCTGGAAAACAACATTCTGTTCCCGCGCGCCATC
GCATTAGAAAAGCGGTAG

Upstream 100 bases:

>100_bases
ACGACACCCATGAAATCAAGCTCTTTTGAAGCACGCTAGTTTAGCTATCCGCAGGCCACGTGACCGCAGTCACTGACCCC
CGCGGCCATCGGGTCCGAAG

Downstream 100 bases:

>100_bases
GTCGTGAGCTTGGCAGACGGCAGCGTCCCCTAGAAGGCGAATTACCATGGTTACGAAAACTGCAGCTGAAATTGAGATTG
CCTTGCAGCGGATGGTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MEEKEQGDPMTTTMTLADLAANSLNAVRILEQHGLDYCCGGKQPFEDACLAKGIKPESILREIEEAQVATVAGRDWHTAP
LDELVKHIVGTHHEYLKLDLPVLAHRMEKVASVHGARDPKVLPRMAEVFAGLRAEMEMHMHKEETILFPFIEQHGRAEVQ
NRPVPPVPFGTIANPIAMMEREHAGAGDALGEIRSLTNDFELPPYACSTVRALYEGLKVLEADLHVHIHLENNILFPRAI
ALEKR

Sequences:

>Translated_245_residues
MEEKEQGDPMTTTMTLADLAANSLNAVRILEQHGLDYCCGGKQPFEDACLAKGIKPESILREIEEAQVATVAGRDWHTAP
LDELVKHIVGTHHEYLKLDLPVLAHRMEKVASVHGARDPKVLPRMAEVFAGLRAEMEMHMHKEETILFPFIEQHGRAEVQ
NRPVPPVPFGTIANPIAMMEREHAGAGDALGEIRSLTNDFELPPYACSTVRALYEGLKVLEADLHVHIHLENNILFPRAI
ALEKR
>Mature_245_residues
MEEKEQGDPMTTTMTLADLAANSLNAVRILEQHGLDYCCGGKQPFEDACLAKGIKPESILREIEEAQVATVAGRDWHTAP
LDELVKHIVGTHHEYLKLDLPVLAHRMEKVASVHGARDPKVLPRMAEVFAGLRAEMEMHMHKEETILFPFIEQHGRAEVQ
NRPVPPVPFGTIANPIAMMEREHAGAGDALGEIRSLTNDFELPPYACSTVRALYEGLKVLEADLHVHIHLENNILFPRAI
ALEKR

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=233, Percent_Identity=38.6266094420601, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 27324; Mature: 27324

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKEQGDPMTTTMTLADLAANSLNAVRILEQHGLDYCCGGKQPFEDACLAKGIKPESIL
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCCCCHHHHHHHCCCCHHHHH
REIEEAQVATVAGRDWHTAPLDELVKHIVGTHHEYLKLDLPVLAHRMEKVASVHGARDPK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHEECHHHHHHHHHHHHHHCCCCCCH
VLPRMAEVFAGLRAEMEMHMHKEETILFPFIEQHGRAEVQNRPVPPVPFGTIANPIAMME
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHH
REHAGAGDALGEIRSLTNDFELPPYACSTVRALYEGLKVLEADLHVHIHLENNILFPRAI
HHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECEEEEEEECCCEECCHHH
ALEKR
CCCCC
>Mature Secondary Structure
MEEKEQGDPMTTTMTLADLAANSLNAVRILEQHGLDYCCGGKQPFEDACLAKGIKPESIL
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCCCCHHHHHHHCCCCHHHHH
REIEEAQVATVAGRDWHTAPLDELVKHIVGTHHEYLKLDLPVLAHRMEKVASVHGARDPK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHEECHHHHHHHHHHHHHHCCCCCCH
VLPRMAEVFAGLRAEMEMHMHKEETILFPFIEQHGRAEVQNRPVPPVPFGTIANPIAMME
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHH
REHAGAGDALGEIRSLTNDFELPPYACSTVRALYEGLKVLEADLHVHIHLENNILFPRAI
HHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECEEEEEEECCCEECCHHH
ALEKR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA