Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622033
Identifier: 116622033
GI number: 116622033
Start: 3699101
End: 3700477
Strand: Reverse
Name: 116622033
Synonym: Acid_2918
Alternate gene names: NA
Gene position: 3700477-3699101 (Counterclockwise)
Preceding gene: 116622041
Following gene: 116622031
Centisome position: 37.13
GC content: 59.62
Gene sequence:
>1377_bases ATGCTTCTTCGCGCCTGGTTGGACATCACTGCCGGCTGGCTCCCCGCCTTCCCCCAGCAGCGCTCTTTGCGCCGCGCCGT CCGCCTCGCTCTCGGCACCTTGTGCGCCTTCGGGCGTCGCACCCTCTCGCGCGCCATCTGCGCTGTCGGCCTGCAACATG TCGATTGGAGTGCCGAGTATTTACTCTTTGCCCGCTGCCGCTGGTACATCGACGACCTCTTTCAGCCCATTTTGCAGAAA GGCCTTCCCTTTTGCTCCGACGCTTATGTGGCCGTTGCCATGGATGATACCCGCCTGCATAAGACCGGCCGCAAAATTCA GTCCGCCTTCTATCAGCGCGATCCTCTCTCTCCGAAGTTTCGTGTCAACTTAATGTTCGGTCTCCGCTTCCTGCAGATGT CGCTGCTGGTCCCGCTCTACCGGGGCCAACAGCAATCAGCCCGTGCCCTGCCGGTGCGCTTTGTCGAGGTGCCTGCCGTT AAGAAACCGGGCAAGAAAGCCTCCCCGGAGGAGAAACTGGCCTGGAAACAGAAAACCAGGGAACTCAATCTCTCTACCCG TTCGGTAGAGGTTGCTCGCACTCTGCGCACCTCGCTGGATGCCGCCGGTGCTGCCGATCGCATTCTGCTTCTGGTAGGCG ATAACAGTTTCTGCAATCGCACTCATTTTCGCGCGGAGTGGGACCGCACCGAACTGATCGTCCGCGCTCGCCGGGATCTG AAACTCTGCCGGCGTGCTCCCCTCGGGGGCCCACGCTTTTACGATTCCACTAAGTTCACTCCCCTGGATGGGTATCAGGA CCAGTCCATCGTCTGGAAGAAAGCCAAAATCTTTCATGGCGGCCGTTGGAGAATGCTCCGTTACAAGGACGTTACGAACG TGTTCTGGCAAACCGGGGCCGGACAGAAGCCCCTGCGTTTATTGGTCGTCGCGCCGATCCCGTATCACGTCGGTGGCAGC AAACGGAGATCCCATCGGGATCCCGCCTTTCTGTTGACCACTGATCTGCGTGCCCCTGCCGGACACCTCTTGCAGCCCTA CTTCGACCGCTGGCAGATCGAAGTCAACCATCGGGAAGAGAAAGATACGTTAGGCGTAGGCCAAGCGCAGGTTCGTTCCC TCCAATCGGTACCGCGACAGCCGGCCTTTGCCGTAGCTGCTTACAGCGCTTTGCTCCTCGCCGGTCTGCTGGCCTACGGT GCCGACCGCACTGACGATTACGAGCCGTTACCCAAATGGAGGCGCGGCGCCAAACGTCCCTCCTGTTTGGATTTGCTCAC CGTTTTGCGCACAGAAATGGCGGAAAACCCCGATCTGCTGCAGCCTTTTGGCATCCATCCTGATTGGATCAGCCTCGGAA AGACTGCGGCTGCCTAG
Upstream 100 bases:
>100_bases TATTTGCGAGGCCAATCACGCTTTTTTGCGCCCGGAGGAATAGGCTCTTTTTTTGGGGCGCCTCTACGTTTCATTTCACA TAGTGAAACACAGGAGGCCT
Downstream 100 bases:
>100_bases AAAAATGTCCAAAGTCCAGAGGCGCCGCAGGCGCCCCGATCGCAGCCCCGCTTGTTACCGGTCAGATTCGCGCGGGTGCG TAGCGCATCTAGCAGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEYLLFARCRWYIDDLFQPILQK GLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKFRVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAV KKPGKKASPEEKLAWKQKTRELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL KLCRRAPLGGPRFYDSTKFTPLDGYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGAGQKPLRLLVVAPIPYHVGGS KRRSHRDPAFLLTTDLRAPAGHLLQPYFDRWQIEVNHREEKDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYG ADRTDDYEPLPKWRRGAKRPSCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA
Sequences:
>Translated_458_residues MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEYLLFARCRWYIDDLFQPILQK GLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKFRVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAV KKPGKKASPEEKLAWKQKTRELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL KLCRRAPLGGPRFYDSTKFTPLDGYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGAGQKPLRLLVVAPIPYHVGGS KRRSHRDPAFLLTTDLRAPAGHLLQPYFDRWQIEVNHREEKDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYG ADRTDDYEPLPKWRRGAKRPSCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA >Mature_458_residues MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEYLLFARCRWYIDDLFQPILQK GLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKFRVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAV KKPGKKASPEEKLAWKQKTRELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL KLCRRAPLGGPRFYDSTKFTPLDGYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGAGQKPLRLLVVAPIPYHVGGS KRRSHRDPAFLLTTDLRAPAGHLLQPYFDRWQIEVNHREEKDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYG ADRTDDYEPLPKWRRGAKRPSCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52171; Mature: 52171
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEY CCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LLFARCRWYIDDLFQPILQKGLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCE RVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAVKKPGKKASPEEKLAWKQKTR EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH ELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL HCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH KLCRRAPLGGPRFYDSTKFTPLDGYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHEEECCCEEEEEEHHHHHHHHCCCC GQKPLRLLVVAPIPYHVGGSKRRSHRDPAFLLTTDLRAPAGHLLQPYFDRWQIEVNHREE CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCC KDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYGADRTDDYEPLPKWRRGAKRP CHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC SCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEY CCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LLFARCRWYIDDLFQPILQKGLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCE RVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAVKKPGKKASPEEKLAWKQKTR EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH ELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL HCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH KLCRRAPLGGPRFYDSTKFTPLDGYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHEEECCCEEEEEEHHHHHHHHCCCC GQKPLRLLVVAPIPYHVGGSKRRSHRDPAFLLTTDLRAPAGHLLQPYFDRWQIEVNHREE CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCC KDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYGADRTDDYEPLPKWRRGAKRP CHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC SCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA