Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is oar [H]
Identifier: 116621882
GI number: 116621882
Start: 3505262
End: 3508003
Strand: Reverse
Name: oar [H]
Synonym: Acid_2765
Alternate gene names: 116621882
Gene position: 3508003-3505262 (Counterclockwise)
Preceding gene: 116621886
Following gene: 116621881
Centisome position: 35.2
GC content: 60.36
Gene sequence:
>2742_bases GTGCGGGGTCAATCGGGGACAGCCAACGGCAGCATCCGCGGAGAGGTGAAAGACGCGTCGGGCGCCGCGGTTCCACGGGC GGCGGTGGAGGCTCGCAACGGGCAGACCGGATATGAGCGCAAGTCGCTGACGGACGATCTCGGCGGCTTCGAACTGCCCC TGCTTCCGGTGGGAAGCTATGAAGTACAGGTGAAGGCTCCGGGGTTCGCAGCATACGCCCAGCGGGGCGTTGTGGTGGAA TTAGCCCGGGCGAGCGACCTGACAATCCGGCTTACGGTCACGACCGAGCAGCAAGCGATTACGGTGGAAGCGGACGCCTC GATTCTCAATACGAGCAGCGCGTCGGTGGAGGGCGGGCTGAACCAGAAGTCGATGGAGAACATGCCGGTGACTTCGCGGA ACAGCTTCAACCTGGCTCTACTGGCGGCGGGTTTCAACGGAACGCGCGACAACGAATTCGGGAACCCGACGTTCGCGTTC GGGGGAATGCAGCGCCGCGGCTTTCTGGTCGATGGCATCGATAATACTCAGCGTGGCGGCCCTGGGCGGCTCGGCATCTT CGCGCCGGAGACGCTGCAGGAAGTGAAAGTGATCAGCAATGCAATGGCGGCGGAGTACGGGCGCACGGTGGGCGGGATGA TCAGCATGGTGACACGAGGCGGCACCAACGAGTATCACGGCGAAGCACTGGTGCTGGAGCGCCGTCCCGGCTTCATCGCG CGGCAATCGCTGGCGCCGAACAAGCCGTTCCAGCAATGGCAGGTCTTCTCAGGCAACTTGGGCGGACCGGTTAAGAAAGA CAAGCTTTTCTTCTTCGTGAGCGGAGAATACGAGCCGCTGGATGCGCCGCGTGCGATCACGATTACTCCGGCCAATGCCG CGGCCCTGGGGCTACCGGCTTCCGATCTGGGAAGCGCGCCGTTCGCGCAACGGTTTCAAACTTATCTCGGCCGTCTGGAC TACCAGTTCAGTGAGCGGAATTCTGTCTACGTGCGCTACAGCAACTTCGTGACGCCTTCGAAGTTCAATACTTCGGGGGG ACTCAGCCCGCGGAGCGCGAGCAACAACTTCGACGATCGCAACGACACTTTGGCATCGCAACTCGCCTCCGTGTTGAGCC CTTCGCTGGTGAACGAAGCGCGGTTCGGATTCCTGCGCCGCGAATTCACGCGGCCGCCAGCATCAGGCGTGGTAGGTCCG GTGATTGCGATTTCGGGTGTAGCCACCATCGGGTCGAATACGTCGGCTAACCAGTACTACAACGAGCGTCAGTTCAATTT CATCGACAACCTGACCTATCGCCGCGGCCGGCACCAGCTGAAATTCGGATTCGATATCGACACGATCCGCGTGATCTCGG CCGACCGTTTGAATCTGACTTACAGTTTCGCCAGCCTGGCGCAGTATCTGAATGCGGTCAACGGGACCGGGAATTATACG CAACTTACCCAGGAGTTCGGCGACAACACGGCGAACCACACTACCAATTCCTTCAACTTCTTCGCGCAGGACGATTTTCA CGTGACGGAGAAGCTTACGCTTTCGTACGGTCTGCGCTACGAATACCTGGCGTATCCTTCTTTACCGGCGAAGGCGCCTC TGACGGAATCGAGAAGCGTGCCGAACGACCCCAACAATGTCGCGCCGCGGTTTGGATTCGCATGGCAGCCGGCGAGCAAA ACGGTGGTCCGCGGCGGATACGGATTGTTCTACGACACCACTAACCTGCGGTTGATCTCGACGGCGATCCGGCAGAACGG CGCGCAGGTGCTGCGTTATGTGATCAGTGGCACAGCGGCGGGCGCGCCGCAGTATCCGGCGGCATTGACGCAAATCGGCC TGACATTCTCGCCAACCAAACCGAGCGTCACGAATTTCTCGAGCGATTTCCGTTCGCTCTACGCGCACCAGGCTAACCTG CAGGTGGAGCGGGAACTGGCATCGGGTTTCTCTGTGACTACGGGTATTCAATATTACGGAGGCCGGCGGCTGCCGCTGCT GATCGACGTGAATCTGGGCGCGCCGGTCAGCTACCTGGCGGATGGGCGGCCAGTATTCAGCAATTCGAATCGCCCGAACC CCAACTTCGCGCAGATTCTGCAATTGAAATCGGTGGCTAACTCGACTTACTACGGCGGCTTTCTTTCGCTCAACAAGCGA TTCTCGCGCGGGTTTCAATTTACTGCTTCCTATACACTCGGGTGGGCTTTTAACACGAACGACTCCACGGGAGACACGGG CAGCTCACCGTCGGATTCCACGAATGATCGCCGCGATTACGGGCTCTCTTCGAGCGACCAGCGGCATCGCTTCGTGTTTC AGGGAGTCTGGCAGCCGGAGCTGCGCACGCACACCCTCGTAGATCGCATGGTGAACGGATTCCTGATCGCCCCGAACGTG ACAGCGACTTCGTCCTTCCCGGTTACGGTGGTACAAGGCACCGACCTTAACGGCGATTCAGTGAATAACGACCGCCCATT GTTCCGGGGGCGCAATGACACGCCGGGGTATGGGCTGAAGGAGGTGAACCTGCGCATCAGCCGGACGTTCGGGCTGCGCG AGCGGCTGCGGCTGGAAGTGATCGGCGAAGCGGAGAATCTGTTCAATACGACCAACGCAGGCTGCACCACGGGGGGGTGC TCCGGCGCGGTGGTGAGCACGTTCAACGCTCCGGACTTTCTGCGGATTACGTCAACTTTCAATTCGCGCCAGATTCAGCT GGGCGGGAGGCTACGGTTTTGA
Upstream 100 bases:
>100_bases CACGGGGCTCTTACATGGTTCTCATTTGCGATTGGTATTTTCGGAAATCATGAAAATCTCAGGTAGGGTATTTCTGCTTG TGTTATTGGGGTGCACTTGC
Downstream 100 bases:
>100_bases AGCGCCTACTCGTTATGGGGCTGCTCGCGGGGGCAGCGTTCGCCCGACAGCCGCTGCTGGTGATCTCGGTGGACGGACTT GACCAGCGCTACCTTGCACA
Product: TonB-dependent receptor, plug
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MRGQSGTANGSIRGEVKDASGAAVPRAAVEARNGQTGYERKSLTDDLGGFELPLLPVGSYEVQVKAPGFAAYAQRGVVVE LARASDLTIRLTVTTEQQAITVEADASILNTSSASVEGGLNQKSMENMPVTSRNSFNLALLAAGFNGTRDNEFGNPTFAF GGMQRRGFLVDGIDNTQRGGPGRLGIFAPETLQEVKVISNAMAAEYGRTVGGMISMVTRGGTNEYHGEALVLERRPGFIA RQSLAPNKPFQQWQVFSGNLGGPVKKDKLFFFVSGEYEPLDAPRAITITPANAAALGLPASDLGSAPFAQRFQTYLGRLD YQFSERNSVYVRYSNFVTPSKFNTSGGLSPRSASNNFDDRNDTLASQLASVLSPSLVNEARFGFLRREFTRPPASGVVGP VIAISGVATIGSNTSANQYYNERQFNFIDNLTYRRGRHQLKFGFDIDTIRVISADRLNLTYSFASLAQYLNAVNGTGNYT QLTQEFGDNTANHTTNSFNFFAQDDFHVTEKLTLSYGLRYEYLAYPSLPAKAPLTESRSVPNDPNNVAPRFGFAWQPASK TVVRGGYGLFYDTTNLRLISTAIRQNGAQVLRYVISGTAAGAPQYPAALTQIGLTFSPTKPSVTNFSSDFRSLYAHQANL QVERELASGFSVTTGIQYYGGRRLPLLIDVNLGAPVSYLADGRPVFSNSNRPNPNFAQILQLKSVANSTYYGGFLSLNKR FSRGFQFTASYTLGWAFNTNDSTGDTGSSPSDSTNDRRDYGLSSSDQRHRFVFQGVWQPELRTHTLVDRMVNGFLIAPNV TATSSFPVTVVQGTDLNGDSVNNDRPLFRGRNDTPGYGLKEVNLRISRTFGLRERLRLEVIGEAENLFNTTNAGCTTGGC SGAVVSTFNAPDFLRITSTFNSRQIQLGGRLRF
Sequences:
>Translated_913_residues MRGQSGTANGSIRGEVKDASGAAVPRAAVEARNGQTGYERKSLTDDLGGFELPLLPVGSYEVQVKAPGFAAYAQRGVVVE LARASDLTIRLTVTTEQQAITVEADASILNTSSASVEGGLNQKSMENMPVTSRNSFNLALLAAGFNGTRDNEFGNPTFAF GGMQRRGFLVDGIDNTQRGGPGRLGIFAPETLQEVKVISNAMAAEYGRTVGGMISMVTRGGTNEYHGEALVLERRPGFIA RQSLAPNKPFQQWQVFSGNLGGPVKKDKLFFFVSGEYEPLDAPRAITITPANAAALGLPASDLGSAPFAQRFQTYLGRLD YQFSERNSVYVRYSNFVTPSKFNTSGGLSPRSASNNFDDRNDTLASQLASVLSPSLVNEARFGFLRREFTRPPASGVVGP VIAISGVATIGSNTSANQYYNERQFNFIDNLTYRRGRHQLKFGFDIDTIRVISADRLNLTYSFASLAQYLNAVNGTGNYT QLTQEFGDNTANHTTNSFNFFAQDDFHVTEKLTLSYGLRYEYLAYPSLPAKAPLTESRSVPNDPNNVAPRFGFAWQPASK TVVRGGYGLFYDTTNLRLISTAIRQNGAQVLRYVISGTAAGAPQYPAALTQIGLTFSPTKPSVTNFSSDFRSLYAHQANL QVERELASGFSVTTGIQYYGGRRLPLLIDVNLGAPVSYLADGRPVFSNSNRPNPNFAQILQLKSVANSTYYGGFLSLNKR FSRGFQFTASYTLGWAFNTNDSTGDTGSSPSDSTNDRRDYGLSSSDQRHRFVFQGVWQPELRTHTLVDRMVNGFLIAPNV TATSSFPVTVVQGTDLNGDSVNNDRPLFRGRNDTPGYGLKEVNLRISRTFGLRERLRLEVIGEAENLFNTTNAGCTTGGC SGAVVSTFNAPDFLRITSTFNSRQIQLGGRLRF >Mature_913_residues MRGQSGTANGSIRGEVKDASGAAVPRAAVEARNGQTGYERKSLTDDLGGFELPLLPVGSYEVQVKAPGFAAYAQRGVVVE LARASDLTIRLTVTTEQQAITVEADASILNTSSASVEGGLNQKSMENMPVTSRNSFNLALLAAGFNGTRDNEFGNPTFAF GGMQRRGFLVDGIDNTQRGGPGRLGIFAPETLQEVKVISNAMAAEYGRTVGGMISMVTRGGTNEYHGEALVLERRPGFIA RQSLAPNKPFQQWQVFSGNLGGPVKKDKLFFFVSGEYEPLDAPRAITITPANAAALGLPASDLGSAPFAQRFQTYLGRLD YQFSERNSVYVRYSNFVTPSKFNTSGGLSPRSASNNFDDRNDTLASQLASVLSPSLVNEARFGFLRREFTRPPASGVVGP VIAISGVATIGSNTSANQYYNERQFNFIDNLTYRRGRHQLKFGFDIDTIRVISADRLNLTYSFASLAQYLNAVNGTGNYT QLTQEFGDNTANHTTNSFNFFAQDDFHVTEKLTLSYGLRYEYLAYPSLPAKAPLTESRSVPNDPNNVAPRFGFAWQPASK TVVRGGYGLFYDTTNLRLISTAIRQNGAQVLRYVISGTAAGAPQYPAALTQIGLTFSPTKPSVTNFSSDFRSLYAHQANL QVERELASGFSVTTGIQYYGGRRLPLLIDVNLGAPVSYLADGRPVFSNSNRPNPNFAQILQLKSVANSTYYGGFLSLNKR FSRGFQFTASYTLGWAFNTNDSTGDTGSSPSDSTNDRRDYGLSSSDQRHRFVFQGVWQPELRTHTLVDRMVNGFLIAPNV TATSSFPVTVVQGTDLNGDSVNNDRPLFRGRNDTPGYGLKEVNLRISRTFGLRERLRLEVIGEAENLFNTTNAGCTTGGC SGAVVSTFNAPDFLRITSTFNSRQIQLGGRLRF
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 99407; Mature: 99407
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGQSGTANGSIRGEVKDASGAAVPRAAVEARNGQTGYERKSLTDDLGGFELPLLPVGSY CCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHCHHCCCCCEEEEEECCCE EVQVKAPGFAAYAQRGVVVELARASDLTIRLTVTTEQQAITVEADASILNTSSASVEGGL EEEEECCCHHHHHCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCCEEECCCCCCCCCC NQKSMENMPVTSRNSFNLALLAAGFNGTRDNEFGNPTFAFGGMQRRGFLVDGIDNTQRGG CHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCC PGRLGIFAPETLQEVKVISNAMAAEYGRTVGGMISMVTRGGTNEYHGEALVLERRPGFIA CCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE RQSLAPNKPFQQWQVFSGNLGGPVKKDKLFFFVSGEYEPLDAPRAITITPANAAALGLPA CCCCCCCCCCHHHEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEECCCH SDLGSAPFAQRFQTYLGRLDYQFSERNSVYVRYSNFVTPSKFNTSGGLSPRSASNNFDDR HHCCCCHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC NDTLASQLASVLSPSLVNEARFGFLRREFTRPPASGVVGPVIAISGVATIGSNTSANQYY HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEECCCCCCHHHH NERQFNFIDNLTYRRGRHQLKFGFDIDTIRVISADRLNLTYSFASLAQYLNAVNGTGNYT CCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCHH QLTQEFGDNTANHTTNSFNFFAQDDFHVTEKLTLSYGLRYEYLAYPSLPAKAPLTESRSV HHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCC PNDPNNVAPRFGFAWQPASKTVVRGGYGLFYDTTNLRLISTAIRQNGAQVLRYVISGTAA CCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCCCEEEHHHHHHCHHHHHHHHHHCCCC GAPQYPAALTQIGLTFSPTKPSVTNFSSDFRSLYAHQANLQVERELASGFSVTTGIQYYG CCCCCCHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCEEECCHHHCC GRRLPLLIDVNLGAPVSYLADGRPVFSNSNRPNPNFAQILQLKSVANSTYYGGFLSLNKR CCCCEEEEEECCCCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHH FSRGFQFTASYTLGWAFNTNDSTGDTGSSPSDSTNDRRDYGLSSSDQRHRFVFQGVWQPE HCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCC LRTHTLVDRMVNGFLIAPNVTATSSFPVTVVQGTDLNGDSVNNDRPLFRGRNDTPGYGLK HHHHHHHHHHHCCEEECCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE EVNLRISRTFGLRERLRLEVIGEAENLFNTTNAGCTTGGCSGAVVSTFNAPDFLRITSTF EEEEEEEEECCCHHHEEEEEECCHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC NSRQIQLGGRLRF CCCEEEECCEECC >Mature Secondary Structure MRGQSGTANGSIRGEVKDASGAAVPRAAVEARNGQTGYERKSLTDDLGGFELPLLPVGSY CCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHCHHCCCCCEEEEEECCCE EVQVKAPGFAAYAQRGVVVELARASDLTIRLTVTTEQQAITVEADASILNTSSASVEGGL EEEEECCCHHHHHCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCCEEECCCCCCCCCC NQKSMENMPVTSRNSFNLALLAAGFNGTRDNEFGNPTFAFGGMQRRGFLVDGIDNTQRGG CHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCC PGRLGIFAPETLQEVKVISNAMAAEYGRTVGGMISMVTRGGTNEYHGEALVLERRPGFIA CCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE RQSLAPNKPFQQWQVFSGNLGGPVKKDKLFFFVSGEYEPLDAPRAITITPANAAALGLPA CCCCCCCCCCHHHEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEECCCH SDLGSAPFAQRFQTYLGRLDYQFSERNSVYVRYSNFVTPSKFNTSGGLSPRSASNNFDDR HHCCCCHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC NDTLASQLASVLSPSLVNEARFGFLRREFTRPPASGVVGPVIAISGVATIGSNTSANQYY HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEECCCCCCHHHH NERQFNFIDNLTYRRGRHQLKFGFDIDTIRVISADRLNLTYSFASLAQYLNAVNGTGNYT CCCCCCHHHHHHHHCCCCEEEECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCHH QLTQEFGDNTANHTTNSFNFFAQDDFHVTEKLTLSYGLRYEYLAYPSLPAKAPLTESRSV HHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCC PNDPNNVAPRFGFAWQPASKTVVRGGYGLFYDTTNLRLISTAIRQNGAQVLRYVISGTAA CCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCCCEEEHHHHHHCHHHHHHHHHHCCCC GAPQYPAALTQIGLTFSPTKPSVTNFSSDFRSLYAHQANLQVERELASGFSVTTGIQYYG CCCCCCHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCEEECCHHHCC GRRLPLLIDVNLGAPVSYLADGRPVFSNSNRPNPNFAQILQLKSVANSTYYGGFLSLNKR CCCCEEEEEECCCCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHH FSRGFQFTASYTLGWAFNTNDSTGDTGSSPSDSTNDRRDYGLSSSDQRHRFVFQGVWQPE HCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCC LRTHTLVDRMVNGFLIAPNVTATSSFPVTVVQGTDLNGDSVNNDRPLFRGRNDTPGYGLK HHHHHHHHHHHCCEEECCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE EVNLRISRTFGLRERLRLEVIGEAENLFNTTNAGCTTGGCSGAVVSTFNAPDFLRITSTF EEEEEEEEECCCHHHEEEEEECCHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC NSRQIQLGGRLRF CCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]