Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is ugl [H]
Identifier: 116621852
GI number: 116621852
Start: 3470992
End: 3473481
Strand: Reverse
Name: ugl [H]
Synonym: Acid_2735
Alternate gene names: 116621852
Gene position: 3473481-3470992 (Counterclockwise)
Preceding gene: 116621853
Following gene: 116621851
Centisome position: 34.85
GC content: 64.98
Gene sequence:
>2490_bases ATGAAACAGGGCTGGCAGGTAGTGGCGGCTCTGGCCTGGATGGCGGCAGGGCTGCAAGCGGCGTCGCACATCAAGACGCT GAAACTCGCGGTCACCAACCCCACCGCGGCGGCGCGGCCGGCGGAGAATATCGTGGTGCCGGTGGCGATGCTGAAGCGCG CCGCGGCGGACTTCAGCCCGGGCAACGCCATCGTGGTGGCGACCGACGCGGCTACGCTCGAAGAGGACGCGCGCGTTTTA CAGACCGCGGAACTGCCCTCGCAGGCCGACGACCTGGATGGCGACGGCAAGTACGACGAGCTGGCCTTCCAGATCGACCT GGCCGCCAGCCAGACCCGCATCGTCACCATCGCGTGGGGCGACCAGGCGAGCATTCTGCGGCTGCGCAGCCAGTATCCGC CGCGCACCGCGATGAAGTTCGCGACGCGCTACGAAGGGCTCGGCTGGGAGAGCGAGGAGATCGCGTGGCGGATTTATTTC GATAAGCGCAACGCGATCGATATCTATGGCAAGCGGCGGCCCGGCCTGTACCTGGATCTGTTCGCCGCGCCGGAATTCGT CTATCACCTGGAAGGTCCGATGGGGCGCGACATCTTCAAGGTGGATCCGACGCTGGGCGTGGGGTCGGTCGGAGCGGTGG TGGAGGGCAAGCCCTCGGCGGTCGCCGACGTGGCGGAGCGCAAGTGGCGCGTGCTGGCGAGCGGGCCGGTGCGCTCCATC GGGGAGTACGAGTATAAGGGCTGGAAGATCGGCGGCAAGACCACCGACATGGTCAGCCGCTTCACTCAGTGGGCCGGCGA GCATGGCTTCCGGCACCGGGTGACCGTGAGCAATCCCGAAGGAATCGCGCTGGTAGCGGCGCTGCCGAAGAAGCCGGCAA TCCGTCCCGTGCAGACCGCGCTGGCGAAAGACACCCTCGGCGTGATGACCTGGGGACCTCAGATCGTCATTCCGGGGACG AAGGCCGGGACCACCGAACTGCCCAATGAAGACCTCGGCCTCGCACTGGTGATCCGCAACGATCAATCGGCAACGATGCA GGAAGCCGACGCCAACTATCTCTTCCCGCTAACGCTGAAGAACAATGCGGCCGAGTGGTACGTGGCCGCGATGTGGGACC AGGAGAATACGGAAGTGTTGGCGACGAATGCGCGCACTCCGGCGGACCGCAATCACGGTGGCACCGTGGCGCCCAATGCA CCGCGCGCCACGCGGGAGCGGTTCGCTCGCGTGGTGAATGACGTCAGCAACCGGATGTCGGCCCCCATGAAGATCGAGCT GCTCGCCAACCCTCCGGCGGCCGCTACGCCGAGCGAACATCGCACCTGGGCGCAGGCGATCGCGCTGCTGCAAAAGGGCG TGGATCGCACGGCGGCGAAGTACGAGCCCGTGATCGCGGCTGGCAACCCCGCGGACTACGACAAGTTCAAAGGCGCCGGC TTCTTCACCGAGGGCGACACCGTCACGGGTGAGTGGAAGCAGCAGCCCGGCTACTTCTGGACCGGAGGCTTCTGGCCGGG CGAGTTGTGGAAACTCTATGGCGAGACCAAGGATGCGCGCTACAAGAAGTGGGCGGAGTTGTGGACCAGCCGGCTGCTGG GCAACGAGAACAAGGAAAATCACGATACCGGATTCCTGAATTTCTATTCGTCGGTGGCGGCCTACGATGCCACGCACGAT GCCAAGTATCGCGCCGGGGGCCTGCGCGCGGCGGCGCGCCTGAAGGAGTTGTTCAATCCGCTCACCAACCTGGTCTCCTC ATGGGGCGTGAACGGCGACGACACCATCATGGACACCATGATGAACCTGCAGATCTGGTGGTGGGCCGCGAAGGAAACCG AGGATCCGCACTGGCTTGAGCTGGGCCGCAAGCACGCGCTGAAGAGTGCCGAGTGGCTGGTGCGCGAGGATGGCAGCGCG ATTCAGAGCGTGCACTACAATCCGGGCGACAATCGCCAGAAGTTCACGTCGAGCGAGAAGGTGCTGGAGTATCCGAACCA TGCCGCGCCCGGCGAACTGGTTTTCACCCACACTCATCAGGGCCTCGCGGCCAACACCGCGTGGTCGCGCGCGCAGGCGT GGGCGGTGTACGGTTTCACCGAGGCCTACCGCGCGACGCGCGACCCCAAACTGCTGGCCACCGCCGAGAAGGGCGCAGCC TACGCGACCGACCATCTGCCCGCGGACGGCGTGCCCTGGTACGATTTCGCCGACGAAGGCGTGTACTTCCGCAATCGCGA TTCCTCGGCCGCGGCGATTCTGGCGGGAGGCCTGCTGCGCCTGGCGGAGTTGACCGGCAAGCTGGCCTATCGCAAGCAGG CCGAAGCCATCACGCAAACCCTGATCGATCGTTATCTTTCTCCGGGCGGAGTTCTGCAACACGGATGCAGCACCCGTCCC AACGATGTCCGCTTAGTCTACGGGGACTATTACCTGCTGGAAACGCTCCTCTCGCTGGAGCACGATTCGCTGAAACACGA AAAAAACTGA
Upstream 100 bases:
>100_bases CGGCGCACACCGAAGTGGCCGACCGTCAATTCGGAGTGGTCAACGTACATCCAGCGTACGCGGCCGGCGGCAGCGGCCTG GAAGCCGCGCACGAGACAAA
Downstream 100 bases:
>100_bases AACTTTAGGGGTTCCAAGATGAAACACCATGACGACGCGCCAGAGCGATCTGGCGTGAACAGGAAAACTGCGTTAATTTT GCTCGCCGGATTATTCTTCT
Product: glycosyl hydrolase family protein
Products: NA
Alternate protein names: UGL; Glycosaminoglycan hydrolase; Glycuronidase; Unsaturated uronic acid hydrolase [H]
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MKQGWQVVAALAWMAAGLQAASHIKTLKLAVTNPTAAARPAENIVVPVAMLKRAAADFSPGNAIVVATDAATLEEDARVL QTAELPSQADDLDGDGKYDELAFQIDLAASQTRIVTIAWGDQASILRLRSQYPPRTAMKFATRYEGLGWESEEIAWRIYF DKRNAIDIYGKRRPGLYLDLFAAPEFVYHLEGPMGRDIFKVDPTLGVGSVGAVVEGKPSAVADVAERKWRVLASGPVRSI GEYEYKGWKIGGKTTDMVSRFTQWAGEHGFRHRVTVSNPEGIALVAALPKKPAIRPVQTALAKDTLGVMTWGPQIVIPGT KAGTTELPNEDLGLALVIRNDQSATMQEADANYLFPLTLKNNAAEWYVAAMWDQENTEVLATNARTPADRNHGGTVAPNA PRATRERFARVVNDVSNRMSAPMKIELLANPPAAATPSEHRTWAQAIALLQKGVDRTAAKYEPVIAAGNPADYDKFKGAG FFTEGDTVTGEWKQQPGYFWTGGFWPGELWKLYGETKDARYKKWAELWTSRLLGNENKENHDTGFLNFYSSVAAYDATHD AKYRAGGLRAAARLKELFNPLTNLVSSWGVNGDDTIMDTMMNLQIWWWAAKETEDPHWLELGRKHALKSAEWLVREDGSA IQSVHYNPGDNRQKFTSSEKVLEYPNHAAPGELVFTHTHQGLAANTAWSRAQAWAVYGFTEAYRATRDPKLLATAEKGAA YATDHLPADGVPWYDFADEGVYFRNRDSSAAAILAGGLLRLAELTGKLAYRKQAEAITQTLIDRYLSPGGVLQHGCSTRP NDVRLVYGDYYLLETLLSLEHDSLKHEKN
Sequences:
>Translated_829_residues MKQGWQVVAALAWMAAGLQAASHIKTLKLAVTNPTAAARPAENIVVPVAMLKRAAADFSPGNAIVVATDAATLEEDARVL QTAELPSQADDLDGDGKYDELAFQIDLAASQTRIVTIAWGDQASILRLRSQYPPRTAMKFATRYEGLGWESEEIAWRIYF DKRNAIDIYGKRRPGLYLDLFAAPEFVYHLEGPMGRDIFKVDPTLGVGSVGAVVEGKPSAVADVAERKWRVLASGPVRSI GEYEYKGWKIGGKTTDMVSRFTQWAGEHGFRHRVTVSNPEGIALVAALPKKPAIRPVQTALAKDTLGVMTWGPQIVIPGT KAGTTELPNEDLGLALVIRNDQSATMQEADANYLFPLTLKNNAAEWYVAAMWDQENTEVLATNARTPADRNHGGTVAPNA PRATRERFARVVNDVSNRMSAPMKIELLANPPAAATPSEHRTWAQAIALLQKGVDRTAAKYEPVIAAGNPADYDKFKGAG FFTEGDTVTGEWKQQPGYFWTGGFWPGELWKLYGETKDARYKKWAELWTSRLLGNENKENHDTGFLNFYSSVAAYDATHD AKYRAGGLRAAARLKELFNPLTNLVSSWGVNGDDTIMDTMMNLQIWWWAAKETEDPHWLELGRKHALKSAEWLVREDGSA IQSVHYNPGDNRQKFTSSEKVLEYPNHAAPGELVFTHTHQGLAANTAWSRAQAWAVYGFTEAYRATRDPKLLATAEKGAA YATDHLPADGVPWYDFADEGVYFRNRDSSAAAILAGGLLRLAELTGKLAYRKQAEAITQTLIDRYLSPGGVLQHGCSTRP NDVRLVYGDYYLLETLLSLEHDSLKHEKN >Mature_829_residues MKQGWQVVAALAWMAAGLQAASHIKTLKLAVTNPTAAARPAENIVVPVAMLKRAAADFSPGNAIVVATDAATLEEDARVL QTAELPSQADDLDGDGKYDELAFQIDLAASQTRIVTIAWGDQASILRLRSQYPPRTAMKFATRYEGLGWESEEIAWRIYF DKRNAIDIYGKRRPGLYLDLFAAPEFVYHLEGPMGRDIFKVDPTLGVGSVGAVVEGKPSAVADVAERKWRVLASGPVRSI GEYEYKGWKIGGKTTDMVSRFTQWAGEHGFRHRVTVSNPEGIALVAALPKKPAIRPVQTALAKDTLGVMTWGPQIVIPGT KAGTTELPNEDLGLALVIRNDQSATMQEADANYLFPLTLKNNAAEWYVAAMWDQENTEVLATNARTPADRNHGGTVAPNA PRATRERFARVVNDVSNRMSAPMKIELLANPPAAATPSEHRTWAQAIALLQKGVDRTAAKYEPVIAAGNPADYDKFKGAG FFTEGDTVTGEWKQQPGYFWTGGFWPGELWKLYGETKDARYKKWAELWTSRLLGNENKENHDTGFLNFYSSVAAYDATHD AKYRAGGLRAAARLKELFNPLTNLVSSWGVNGDDTIMDTMMNLQIWWWAAKETEDPHWLELGRKHALKSAEWLVREDGSA IQSVHYNPGDNRQKFTSSEKVLEYPNHAAPGELVFTHTHQGLAANTAWSRAQAWAVYGFTEAYRATRDPKLLATAEKGAA YATDHLPADGVPWYDFADEGVYFRNRDSSAAAILAGGLLRLAELTGKLAYRKQAEAITQTLIDRYLSPGGVLQHGCSTRP NDVRLVYGDYYLLETLLSLEHDSLKHEKN
Specific function: Catalyzes the hydrolysis of oligosaccharides with unsaturated glucuronyl residues at the non-reducing terminal, to a sugar or an amino sugar, and an unsaturated D-glucuronic acid (GlcA), which is nonenzymatically converted immediately to alpha- keto acid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 88 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010905 [H]
Pfam domain/function: PF07470 Glyco_hydro_88 [H]
EC number: NA
Molecular weight: Translated: 91485; Mature: 91485
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQGWQVVAALAWMAAGLQAASHIKTLKLAVTNPTAAARPAENIVVPVAMLKRAAADFSP CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHCCCCC GNAIVVATDAATLEEDARVLQTAELPSQADDLDGDGKYDELAFQIDLAASQTRIVTIAWG CCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEC DQASILRLRSQYPPRTAMKFATRYEGLGWESEEIAWRIYFDKRNAIDIYGKRRPGLYLDL CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEEE FAAPEFVYHLEGPMGRDIFKVDPTLGVGSVGAVVEGKPSAVADVAERKWRVLASGPVRSI ECCCCEEEEECCCCCCCEEEECCCCCCCCCCCEECCCCHHHHHHHHHCEEEEECCCCHHC GEYEYKGWKIGGKTTDMVSRFTQWAGEHGFRHRVTVSNPEGIALVAALPKKPAIRPVQTA CCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHH LAKDTLGVMTWGPQIVIPGTKAGTTELPNEDLGLALVIRNDQSATMQEADANYLFPLTLK HHHHCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCEEEEEEEC NNAAEWYVAAMWDQENTEVLATNARTPADRNHGGTVAPNAPRATRERFARVVNDVSNRMS CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC APMKIELLANPPAAATPSEHRTWAQAIALLQKGVDRTAAKYEPVIAAGNPADYDKFKGAG CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCCCCHHCCCCC FFTEGDTVTGEWKQQPGYFWTGGFWPGELWKLYGETKDARYKKWAELWTSRLLGNENKEN EEECCCEECCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC HDTGFLNFYSSVAAYDATHDAKYRAGGLRAAARLKELFNPLTNLVSSWGVNGDDTIMDTM CCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MNLQIWWWAAKETEDPHWLELGRKHALKSAEWLVREDGSAIQSVHYNPGDNRQKFTSSEK HCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHEEEECCCCCCHHHHCCCHH VLEYPNHAAPGELVFTHTHQGLAANTAWSRAQAWAVYGFTEAYRATRDPKLLATAEKGAA HHHCCCCCCCCCEEEEECCCCCCCCCHHHHHCEEEEEEHHHHHHCCCCCCEEEECCCCCE YATDHLPADGVPWYDFADEGVYFRNRDSSAAAILAGGLLRLAELTGKLAYRKQAEAITQT EECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDRYLSPGGVLQHGCSTRPNDVRLVYGDYYLLETLLSLEHDSLKHEKN HHHHHCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKQGWQVVAALAWMAAGLQAASHIKTLKLAVTNPTAAARPAENIVVPVAMLKRAAADFSP CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHCCCCC GNAIVVATDAATLEEDARVLQTAELPSQADDLDGDGKYDELAFQIDLAASQTRIVTIAWG CCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEC DQASILRLRSQYPPRTAMKFATRYEGLGWESEEIAWRIYFDKRNAIDIYGKRRPGLYLDL CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEEE FAAPEFVYHLEGPMGRDIFKVDPTLGVGSVGAVVEGKPSAVADVAERKWRVLASGPVRSI ECCCCEEEEECCCCCCCEEEECCCCCCCCCCCEECCCCHHHHHHHHHCEEEEECCCCHHC GEYEYKGWKIGGKTTDMVSRFTQWAGEHGFRHRVTVSNPEGIALVAALPKKPAIRPVQTA CCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHH LAKDTLGVMTWGPQIVIPGTKAGTTELPNEDLGLALVIRNDQSATMQEADANYLFPLTLK HHHHCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCEEEEEEEC NNAAEWYVAAMWDQENTEVLATNARTPADRNHGGTVAPNAPRATRERFARVVNDVSNRMS CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC APMKIELLANPPAAATPSEHRTWAQAIALLQKGVDRTAAKYEPVIAAGNPADYDKFKGAG CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCCCCHHCCCCC FFTEGDTVTGEWKQQPGYFWTGGFWPGELWKLYGETKDARYKKWAELWTSRLLGNENKEN EEECCCEECCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC HDTGFLNFYSSVAAYDATHDAKYRAGGLRAAARLKELFNPLTNLVSSWGVNGDDTIMDTM CCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MNLQIWWWAAKETEDPHWLELGRKHALKSAEWLVREDGSAIQSVHYNPGDNRQKFTSSEK HCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHEEEECCCCCCHHHHCCCHH VLEYPNHAAPGELVFTHTHQGLAANTAWSRAQAWAVYGFTEAYRATRDPKLLATAEKGAA HHHCCCCCCCCCEEEEECCCCCCCCCHHHHHCEEEEEEHHHHHHCCCCCCEEEECCCCCE YATDHLPADGVPWYDFADEGVYFRNRDSSAAAILAGGLLRLAELTGKLAYRKQAEAITQT EECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDRYLSPGGVLQHGCSTRPNDVRLVYGDYYLLETLLSLEHDSLKHEKN HHHHHCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10441389 [H]