Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116621831
GI number: 116621831
Start: 3440578
End: 3443025
Strand: Reverse
Name: macB [H]
Synonym: Acid_2713
Alternate gene names: 116621831
Gene position: 3443025-3440578 (Counterclockwise)
Preceding gene: 116621832
Following gene: 116621830
Centisome position: 34.55
GC content: 62.38
Gene sequence:
>2448_bases ATGCCCCATCGCCAGCTGGGTAGCCCCCTCGCAAGCCTGCTGCAAGATTTCCGGTTCGCACTGCGGCAATTGCGCATGAA TCCGGGCTTTGCCTGCACCGCCATCCTGGTGTTGGCTCTGGGAATCGCCGCCAGTGTCGCGGTTTTCGCATTTGTGGACG CGGCGCTGCTCCAACCGCTTCCCTACCAGGACCCGTCCCGCCTCGTGGTCGCGTATGAGACTACAAGCGCCTGCCGCGAT TGCAATATTTCCTATCCGGACTATCTGGACTGGAAGAATACCAATACCAGTTTCCTCTCGCTCGAGGCATGGGACGCTTC CGTTTATCTTTGGCGCGGTCCGGAGGGTGTGCAGGCGGTTCGCTGCGCCCACGTGAGCGGCGGTTTTTTCCGAACCCTGG GCGTGGCAGCGATGCAGGGCCGCGTCTTTACCGATGCGGATGACAGGCCCGCCGCGCCGCGAACCGTCGTCCTTACGTAC GGCGCCTGGCAAAGCCGTTTTGGCGGCAGGCAGGATATTGTCGGGCAGTCCCTGATTCTCGACAATGCGCCGTTCTCCGT AATCGGCGTGCTCCCGCGCGAGTTTCACTTTGCGATGCGCGCCGCGGAGTTCTTCACCACGATCCACGACCTTAGCCAGT GCGAACAGTCGCGCGGCTGCCATTCCCTCGAGGCTTTCGGACGGCTTCGGAACGGTGTTTCTTTTGAGGCTGCCGCGGCG GAAATGAAGACGATGGCCGCGCGCCTGGAGAGTCAGTATCCGGAATCCAACAAAGGGCGAAGCGTGCGCCTGGTGCCCTT TCGGGATGCCGTCGTCGGAGATATCCGGCCCACTCTCCTGGTCTTATCGAGCGGAGCGGGCCTGCTGCTGCTCATCGCGT ACGTGAATGTGGCGAGCCTCCTGCTGGTCAGGGCCGAAAGCCGTAAGCGGGAGACGGTGCTGCGCGGAGTGCTCGGCGCC TCCCTCGGCCGCCTCATACTCCAGTTCGTAACCGAAGGCGTATCGCTGGTGATGGTCGCGGTCGCCCTCGCGATGCCGGT GGCTTCCGCTGCCATCCCCAGGCTGTTCCGGCTGATTCCGGAACGCCGGCTGCGCGGAATGCCGTATTTCCGCGATGCCG GACTGCATCCGCGTGTGCTGCTGTTTGCCGCCGCCATCTCACTCCTGGCGGTGGTGGTTTTCTCCGTCACGCCGGTTTTG CGCCTGTCGCTCTCCAACCTGCGAGAGGATCTTGCCGAAGGCGGTCGCGGCTCGGCCGGAACACTATGGAAGCGTTTCGG GTCGAATCTGGTGGCGGCGGAACTGGCGATCGCGATGGTGCTGCTCTCCAGCGCGGGATTGTTAAGCAAGAGCCTGTACC GCATGTTCCACGTCGATCTGAACTTCAATTCGGCGAACCTGGACACTCTGGAGATCGACGTTCGTGGCGCCGGTTACCAG AACAGCGATCAGCTCCGTATGCTCTCCCTGCGCCTCGTGGAGCACATCTCCACCATTCCTGGCGTGGTCTCCGTCGCCCA TACCAGCGACCTGCCGATCACCTGCAACTGCAGTTCGACCGAGTTCCGCGTACTGGGGCATCCCTGGTACGGAGAGCACG ATAAGGCCCTGCGGCGGGAGACCAGCGCGGATTACTTCAAAGTCTTGCAGGCCAGGCTCCTCGAAGGACGCTTCTATACG GAAGCAGACGATAGCTCGAAGCCGCGCGTGGCCGTGATCAACCAGGCGCTGGCCAAACAGTTTTTCCCGCGTGAAGACCC GGTGGGCAGAACGCTTGGCGATCCGGAGCTTTCGCCAAAGTCGTTCGTGCAGGTGATCGGCGTAGTGGACGATGTTCGCG AAGGCGATCTCGTGGAACCCCTGGTCCCCGCGCTTTACTTGCCGTTCCAACAAGAGACCGGCGGCACCTTGTTTCTTGTG GCCCGCACCGCGCAACGCCCCGCGACGATGATGCAGTCTCTGGTTCGTGCCATCCATCAGGTGGATCCCAACCTCGGAGT CAGAAACGAATTTGTCATGGAGGACCGGGTCAACGACTCGCCGGCGGCTTTCCTGAACCGCTCTTCGGCGTGGCTGGTCG GAGCATTTGCAGGGCTGGCTCTGTTGCTTGGCGCGGTTGGCCTTTATGGCGTGGTTGCTTACTCGGTGAGCCAGAGGACG CGCGAGATCGGCGTGCGCATGGCGCTGGGGGCACAGCCCGCCGCGGTATATCGCTTGATCCTCGGCCAGGCCGGGTTTAT GGCAGCGATAGGAATCGTGGTTGGCTTGGGCTGTTCGATTCCCGCCGGCCGTTTGCTGAGAGGTCTGCTGTTCGGTGTGC AATCAGGAGATCTGCCGACGCTGATCGGCGTGGCTGCCGTGCTCGGGATTTGTGCGCTTTTGGCGAGTTATTTGCCGGCG CGAAGAGCGGCCTCGGTAAATCCCATCGATGCGCTTCGCGCGGAATAA
Upstream 100 bases:
>100_bases GCAACCGCTCCAATCCGAGCCGCGCGCGTCAGCAAGCGTCTGCTAATTCGCATTTAATCTCGCCGTCGCTCCTCCAGGCC GCTGGAGTACCCTGTAACAT
Downstream 100 bases:
>100_bases TACCGCGCGCTCGGAGATTTGGCGGAAGGGCAGCTCGGAACACGCGCCCGGCGGAAGGGCAGCTCGGAACAGAGATGGTA TGAGAAGGCCGGTCCCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MPHRQLGSPLASLLQDFRFALRQLRMNPGFACTAILVLALGIAASVAVFAFVDAALLQPLPYQDPSRLVVAYETTSACRD CNISYPDYLDWKNTNTSFLSLEAWDASVYLWRGPEGVQAVRCAHVSGGFFRTLGVAAMQGRVFTDADDRPAAPRTVVLTY GAWQSRFGGRQDIVGQSLILDNAPFSVIGVLPREFHFAMRAAEFFTTIHDLSQCEQSRGCHSLEAFGRLRNGVSFEAAAA EMKTMAARLESQYPESNKGRSVRLVPFRDAVVGDIRPTLLVLSSGAGLLLLIAYVNVASLLLVRAESRKRETVLRGVLGA SLGRLILQFVTEGVSLVMVAVALAMPVASAAIPRLFRLIPERRLRGMPYFRDAGLHPRVLLFAAAISLLAVVVFSVTPVL RLSLSNLREDLAEGGRGSAGTLWKRFGSNLVAAELAIAMVLLSSAGLLSKSLYRMFHVDLNFNSANLDTLEIDVRGAGYQ NSDQLRMLSLRLVEHISTIPGVVSVAHTSDLPITCNCSSTEFRVLGHPWYGEHDKALRRETSADYFKVLQARLLEGRFYT EADDSSKPRVAVINQALAKQFFPREDPVGRTLGDPELSPKSFVQVIGVVDDVREGDLVEPLVPALYLPFQQETGGTLFLV ARTAQRPATMMQSLVRAIHQVDPNLGVRNEFVMEDRVNDSPAAFLNRSSAWLVGAFAGLALLLGAVGLYGVVAYSVSQRT REIGVRMALGAQPAAVYRLILGQAGFMAAIGIVVGLGCSIPAGRLLRGLLFGVQSGDLPTLIGVAAVLGICALLASYLPA RRAASVNPIDALRAE
Sequences:
>Translated_815_residues MPHRQLGSPLASLLQDFRFALRQLRMNPGFACTAILVLALGIAASVAVFAFVDAALLQPLPYQDPSRLVVAYETTSACRD CNISYPDYLDWKNTNTSFLSLEAWDASVYLWRGPEGVQAVRCAHVSGGFFRTLGVAAMQGRVFTDADDRPAAPRTVVLTY GAWQSRFGGRQDIVGQSLILDNAPFSVIGVLPREFHFAMRAAEFFTTIHDLSQCEQSRGCHSLEAFGRLRNGVSFEAAAA EMKTMAARLESQYPESNKGRSVRLVPFRDAVVGDIRPTLLVLSSGAGLLLLIAYVNVASLLLVRAESRKRETVLRGVLGA SLGRLILQFVTEGVSLVMVAVALAMPVASAAIPRLFRLIPERRLRGMPYFRDAGLHPRVLLFAAAISLLAVVVFSVTPVL RLSLSNLREDLAEGGRGSAGTLWKRFGSNLVAAELAIAMVLLSSAGLLSKSLYRMFHVDLNFNSANLDTLEIDVRGAGYQ NSDQLRMLSLRLVEHISTIPGVVSVAHTSDLPITCNCSSTEFRVLGHPWYGEHDKALRRETSADYFKVLQARLLEGRFYT EADDSSKPRVAVINQALAKQFFPREDPVGRTLGDPELSPKSFVQVIGVVDDVREGDLVEPLVPALYLPFQQETGGTLFLV ARTAQRPATMMQSLVRAIHQVDPNLGVRNEFVMEDRVNDSPAAFLNRSSAWLVGAFAGLALLLGAVGLYGVVAYSVSQRT REIGVRMALGAQPAAVYRLILGQAGFMAAIGIVVGLGCSIPAGRLLRGLLFGVQSGDLPTLIGVAAVLGICALLASYLPA RRAASVNPIDALRAE >Mature_814_residues PHRQLGSPLASLLQDFRFALRQLRMNPGFACTAILVLALGIAASVAVFAFVDAALLQPLPYQDPSRLVVAYETTSACRDC NISYPDYLDWKNTNTSFLSLEAWDASVYLWRGPEGVQAVRCAHVSGGFFRTLGVAAMQGRVFTDADDRPAAPRTVVLTYG AWQSRFGGRQDIVGQSLILDNAPFSVIGVLPREFHFAMRAAEFFTTIHDLSQCEQSRGCHSLEAFGRLRNGVSFEAAAAE MKTMAARLESQYPESNKGRSVRLVPFRDAVVGDIRPTLLVLSSGAGLLLLIAYVNVASLLLVRAESRKRETVLRGVLGAS LGRLILQFVTEGVSLVMVAVALAMPVASAAIPRLFRLIPERRLRGMPYFRDAGLHPRVLLFAAAISLLAVVVFSVTPVLR LSLSNLREDLAEGGRGSAGTLWKRFGSNLVAAELAIAMVLLSSAGLLSKSLYRMFHVDLNFNSANLDTLEIDVRGAGYQN SDQLRMLSLRLVEHISTIPGVVSVAHTSDLPITCNCSSTEFRVLGHPWYGEHDKALRRETSADYFKVLQARLLEGRFYTE ADDSSKPRVAVINQALAKQFFPREDPVGRTLGDPELSPKSFVQVIGVVDDVREGDLVEPLVPALYLPFQQETGGTLFLVA RTAQRPATMMQSLVRAIHQVDPNLGVRNEFVMEDRVNDSPAAFLNRSSAWLVGAFAGLALLLGAVGLYGVVAYSVSQRTR EIGVRMALGAQPAAVYRLILGQAGFMAAIGIVVGLGCSIPAGRLLRGLLFGVQSGDLPTLIGVAAVLGICALLASYLPAR RAASVNPIDALRAE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=283, Percent_Identity=26.1484098939929, Blast_Score=76, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 88280; Mature: 88149
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRQLGSPLASLLQDFRFALRQLRMNPGFACTAILVLALGIAASVAVFAFVDAALLQPL CCCHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYQDPSRLVVAYETTSACRDCNISYPDYLDWKNTNTSFLSLEAWDASVYLWRGPEGVQAV CCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHH RCAHVSGGFFRTLGVAAMQGRVFTDADDRPAAPRTVVLTYGAWQSRFGGRQDIVGQSLIL HHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCHHHHCCCCHHHCCCHHEE DNAPFSVIGVLPREFHFAMRAAEFFTTIHDLSQCEQSRGCHSLEAFGRLRNGVSFEAAAA CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH EMKTMAARLESQYPESNKGRSVRLVPFRDAVVGDIRPTLLVLSSGAGLLLLIAYVNVASL HHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH LLVRAESRKRETVLRGVLGASLGRLILQFVTEGVSLVMVAVALAMPVASAAIPRLFRLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERRLRGMPYFRDAGLHPRVLLFAAAISLLAVVVFSVTPVLRLSLSNLREDLAEGGRGSAG HHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TLWKRFGSNLVAAELAIAMVLLSSAGLLSKSLYRMFHVDLNFNSANLDTLEIDVRGAGYQ HHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHEEEEECCCCCCCEEEEEEEECCCCC NSDQLRMLSLRLVEHISTIPGVVSVAHTSDLPITCNCSSTEFRVLGHPWYGEHDKALRRE CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEEEECCCCCCHHHHHHHH TSADYFKVLQARLLEGRFYTEADDSSKPRVAVINQALAKQFFPREDPVGRTLGDPELSPK CCHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH SFVQVIGVVDDVREGDLVEPLVPALYLPFQQETGGTLFLVARTAQRPATMMQSLVRAIHQ HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH VDPNLGVRNEFVMEDRVNDSPAAFLNRSSAWLVGAFAGLALLLGAVGLYGVVAYSVSQRT CCCCCCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REIGVRMALGAQPAAVYRLILGQAGFMAAIGIVVGLGCSIPAGRLLRGLLFGVQSGDLPT HHHCHHEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHH LIGVAAVLGICALLASYLPARRAASVNPIDALRAE HHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCC >Mature Secondary Structure PHRQLGSPLASLLQDFRFALRQLRMNPGFACTAILVLALGIAASVAVFAFVDAALLQPL CCHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYQDPSRLVVAYETTSACRDCNISYPDYLDWKNTNTSFLSLEAWDASVYLWRGPEGVQAV CCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHH RCAHVSGGFFRTLGVAAMQGRVFTDADDRPAAPRTVVLTYGAWQSRFGGRQDIVGQSLIL HHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCHHHHCCCCHHHCCCHHEE DNAPFSVIGVLPREFHFAMRAAEFFTTIHDLSQCEQSRGCHSLEAFGRLRNGVSFEAAAA CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH EMKTMAARLESQYPESNKGRSVRLVPFRDAVVGDIRPTLLVLSSGAGLLLLIAYVNVASL HHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH LLVRAESRKRETVLRGVLGASLGRLILQFVTEGVSLVMVAVALAMPVASAAIPRLFRLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERRLRGMPYFRDAGLHPRVLLFAAAISLLAVVVFSVTPVLRLSLSNLREDLAEGGRGSAG HHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TLWKRFGSNLVAAELAIAMVLLSSAGLLSKSLYRMFHVDLNFNSANLDTLEIDVRGAGYQ HHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHEEEEECCCCCCCEEEEEEEECCCCC NSDQLRMLSLRLVEHISTIPGVVSVAHTSDLPITCNCSSTEFRVLGHPWYGEHDKALRRE CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEEEECCCCCCHHHHHHHH TSADYFKVLQARLLEGRFYTEADDSSKPRVAVINQALAKQFFPREDPVGRTLGDPELSPK CCHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH SFVQVIGVVDDVREGDLVEPLVPALYLPFQQETGGTLFLVARTAQRPATMMQSLVRAIHQ HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH VDPNLGVRNEFVMEDRVNDSPAAFLNRSSAWLVGAFAGLALLLGAVGLYGVVAYSVSQRT CCCCCCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REIGVRMALGAQPAAVYRLILGQAGFMAAIGIVVGLGCSIPAGRLLRGLLFGVQSGDLPT HHHCHHEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHH LIGVAAVLGICALLASYLPARRAASVNPIDALRAE HHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA