Click here to switch to the map view.

The map label for this gene is 116619615

Identifier: 116619615

GI number: 116619615

Start: 584886

End: 586172

Strand: Direct

Name: 116619615

Synonym: Acid_0476

Alternate gene names: NA

Gene position: 584886-586172 (Clockwise)

Preceding gene: 116619613

Following gene: 116619618

Centisome position: 5.87

GC content: 65.66

Gene sequence:

>1287_bases
ATGAATGAAGCGCCACAGGCGCAAAGCAATCAAAGAAATGCCAACGGCCCTAAGCCTACAATCAGAACAGTGGCCAAACA
TCTTCTACTTTTCGCGGCGACTACCGGGTATCAGATCCGCGTCTTTGCGGACGCCGCGCGGCGATTGGGCGTGGACGTGA
CGCTGGCCACCGACCGTTGCCACGTGATGGAGGATCCCTGGAACGATCGCGCGGTCGCGGTCAAGTTCGACCGGATTCCG
GAATCGCTCGAGGCGCTGCGAGGATTGCAGGTGGACGGGGTTGCGGCCGTGGGCGACCGTCCGGCGCTGCTGGCGGCGGA
GGCGGCGGCCATGTTCGGCGTGCCTTTCCACCCGGCTGCGGCGGCACGCGCATGCCTCGACAAGAACCTGGCCCGGCAGC
TTTTTCAGGCAGCCGGTTTGCGCGTTCCGGCGTTCTTCCGCGCGTCGCTCGCGGATAACCCGGAAGAGCTCGCTGCCCGC
GCGCCGTATCCCTGTGTGCTCAAGCCACTCGGGCTTTCGGCGAGCCGCGGAGTGATCCGCGCCGATGATCCCGGCGGCTT
CGTCGCCGCCTTCCGCCGTATCGCGAAGATGGGTGAGCGCGAACTGCAGGTGGAAAGCTACATTCCGGGCCGCGAGTTCG
CGGTGGAAGGCGTGATGACCGGCGGCAAGCTGCAGACGATCGCGATCTTCGATAAGCCCGACCCGCTCGAGGGGCCGTTT
TTCGAGGAGACGATCTATGTGACGCCCTCGCGCGAAGCGGAGCACGTGCAGCAGGCGCTAATCGACACCGCCCGACGCGC
AGCGGGCGCGCTCGGATTGCAGCACGGCCCGGTGCATGCGGAACTGCGTTACAACTCGGAAGGCGCGTGGATACTGGAAG
TTCACGGCCGCCCCATAGGCGGCTTGTGCGCGCGGGCGCTGCGGCTGGCCGACGGCATTCCGCTGGAGGAGATGATCCTG
GTACACGCGCTCGGCGGCAACGTCTGGATGGCGAAGTTGGACGACGGCGCCTCGGGTGTGATGATGATCCCGATTCCCAA
AGGCGGCACCTACCAATCGGTGGAAGGCGTGCAGCGGGCGCGAGAAGTGCCGGGAATCGAAGACGTGGAGATCACCGCCG
CCGAGGGACAAGTGCTGCTGCCGCTTCCGGAGGGATCGAGCTATCTGGGGTTCATCTTCGCGCGCGGCGAAACGCCGCAA
GAGGTGGAGCAGGCGCTGCGGCGGTCGCACGCGGAATTGACCTTCCACATCGCGACCACGCTCGAGACGTTCAGCCCTTC
GACTTAG

Upstream 100 bases:

>100_bases
ACATCATTGATCCCGATCGCGGGCTCGGGGATCTCTTCGAGCCACAACCCTGGCTGGCTCTTGCTCTTTACCAAAGCCTT
CATCACTCTACGATAGCGTG

Downstream 100 bases:

>100_bases
GCGCGACGAAATCGGGCGGCAATTGCGCGCCCTCGCCGAAGAAATACTTGTCCATCTGTTCCAGCAGAAATTCCTGAGCC
TGCGGGGTTCCGAGGTTGAG

Product: ATP-dependent carboxylate-amine ligase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MNEAPQAQSNQRNANGPKPTIRTVAKHLLLFAATTGYQIRVFADAARRLGVDVTLATDRCHVMEDPWNDRAVAVKFDRIP
ESLEALRGLQVDGVAAVGDRPALLAAEAAAMFGVPFHPAAAARACLDKNLARQLFQAAGLRVPAFFRASLADNPEELAAR
APYPCVLKPLGLSASRGVIRADDPGGFVAAFRRIAKMGERELQVESYIPGREFAVEGVMTGGKLQTIAIFDKPDPLEGPF
FEETIYVTPSREAEHVQQALIDTARRAAGALGLQHGPVHAELRYNSEGAWILEVHGRPIGGLCARALRLADGIPLEEMIL
VHALGGNVWMAKLDDGASGVMMIPIPKGGTYQSVEGVQRAREVPGIEDVEITAAEGQVLLPLPEGSSYLGFIFARGETPQ
EVEQALRRSHAELTFHIATTLETFSPST

Sequences:

>Translated_428_residues
MNEAPQAQSNQRNANGPKPTIRTVAKHLLLFAATTGYQIRVFADAARRLGVDVTLATDRCHVMEDPWNDRAVAVKFDRIP
ESLEALRGLQVDGVAAVGDRPALLAAEAAAMFGVPFHPAAAARACLDKNLARQLFQAAGLRVPAFFRASLADNPEELAAR
APYPCVLKPLGLSASRGVIRADDPGGFVAAFRRIAKMGERELQVESYIPGREFAVEGVMTGGKLQTIAIFDKPDPLEGPF
FEETIYVTPSREAEHVQQALIDTARRAAGALGLQHGPVHAELRYNSEGAWILEVHGRPIGGLCARALRLADGIPLEEMIL
VHALGGNVWMAKLDDGASGVMMIPIPKGGTYQSVEGVQRAREVPGIEDVEITAAEGQVLLPLPEGSSYLGFIFARGETPQ
EVEQALRRSHAELTFHIATTLETFSPST
>Mature_428_residues
MNEAPQAQSNQRNANGPKPTIRTVAKHLLLFAATTGYQIRVFADAARRLGVDVTLATDRCHVMEDPWNDRAVAVKFDRIP
ESLEALRGLQVDGVAAVGDRPALLAAEAAAMFGVPFHPAAAARACLDKNLARQLFQAAGLRVPAFFRASLADNPEELAAR
APYPCVLKPLGLSASRGVIRADDPGGFVAAFRRIAKMGERELQVESYIPGREFAVEGVMTGGKLQTIAIFDKPDPLEGPF
FEETIYVTPSREAEHVQQALIDTARRAAGALGLQHGPVHAELRYNSEGAWILEVHGRPIGGLCARALRLADGIPLEEMIL
VHALGGNVWMAKLDDGASGVMMIPIPKGGTYQSVEGVQRAREVPGIEDVEITAAEGQVLLPLPEGSSYLGFIFARGETPQ
EVEQALRRSHAELTFHIATTLETFSPST

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005479 [H]

Pfam domain/function: PF02786 CPSase_L_D2 [H]

EC number: NA

Molecular weight: Translated: 46087; Mature: 46087

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAPQAQSNQRNANGPKPTIRTVAKHLLLFAATTGYQIRVFADAARRLGVDVTLATDRC
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCEEEEEEHHHHHCCCEEEEECCCE
HVMEDPWNDRAVAVKFDRIPESLEALRGLQVDGVAAVGDRPALLAAEAAAMFGVPFHPAA
EEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCHHH
AARACLDKNLARQLFQAAGLRVPAFFRASLADNPEELAARAPYPCVLKPLGLSASRGVIR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCEEE
ADDPGGFVAAFRRIAKMGERELQVESYIPGREFAVEGVMTGGKLQTIAIFDKPDPLEGPF
ECCCCHHHHHHHHHHHCCCHHEEHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCC
FEETIYVTPSREAEHVQQALIDTARRAAGALGLQHGPVHAELRYNSEGAWILEVHGRPIG
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCHH
GLCARALRLADGIPLEEMILVHALGGNVWMAKLDDGASGVMMIPIPKGGTYQSVEGVQRA
HHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHH
REVPGIEDVEITAAEGQVLLPLPEGSSYLGFIFARGETPQEVEQALRRSHAELTFHIATT
HHCCCCCCEEEEECCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEE
LETFSPST
HHHCCCCC
>Mature Secondary Structure
MNEAPQAQSNQRNANGPKPTIRTVAKHLLLFAATTGYQIRVFADAARRLGVDVTLATDRC
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCEEEEEEHHHHHCCCEEEEECCCE
HVMEDPWNDRAVAVKFDRIPESLEALRGLQVDGVAAVGDRPALLAAEAAAMFGVPFHPAA
EEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCHHH
AARACLDKNLARQLFQAAGLRVPAFFRASLADNPEELAARAPYPCVLKPLGLSASRGVIR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCEEE
ADDPGGFVAAFRRIAKMGERELQVESYIPGREFAVEGVMTGGKLQTIAIFDKPDPLEGPF
ECCCCHHHHHHHHHHHCCCHHEEHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCC
FEETIYVTPSREAEHVQQALIDTARRAAGALGLQHGPVHAELRYNSEGAWILEVHGRPIG
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCHH
GLCARALRLADGIPLEEMILVHALGGNVWMAKLDDGASGVMMIPIPKGGTYQSVEGVQRA
HHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHH
REVPGIEDVEITAAEGQVLLPLPEGSSYLGFIFARGETPQEVEQALRRSHAELTFHIATT
HHCCCCCCEEEEECCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEE
LETFSPST
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]