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The map label for this gene is 116517176

Identifier: 116517176

GI number: 116517176

Start: 1005253

End: 1006092

Strand: Direct

Name: 116517176

Synonym: SPD_0996

Alternate gene names: NA

Gene position: 1005253-1006092 (Clockwise)

Preceding gene: 116517107

Following gene: 116516205

Centisome position: 49.13

GC content: 38.69

Gene sequence:

>840_bases
ATGACAAAAATTAAGATTGTAACCGATTCATCTGTTACTATTGAACCTGAACTAGTAAAGCAATTAGATATTACAATTGT
TCCATTATCTGTAATGATTGATAATGTTGTTTATTCTGATGCGGATTTGAAAGAAGAAGGTAAATTTCTTCAGTTGATGC
AAGAAAGTAAGAATCTTCCGAAAACAAGTCAGCCACCTGTAGGTGTCTTTGCTGAGATTTTTGAAGACCTATGCAAAGAT
GGTGGCCAGATTCTTGCTATTCATATGTCCCATGCTCTTTCGGGTACGGTAGAAGCAGCACGCCAAGGTGCTAGCCTATC
TACTGCAGATGTGATTGTTGTTGATAGTTCCTTCACTGACCAAGCCCTGAAATTCCAAGTTGTTGAGGCTGCGAAGTTAG
CTCAAGAAGGTAAAGATATGGAGGCAATTTTATCTCATGTAGAAGAGGTTAAAAACCATACAGAGCTTTATATTGGTGTT
TCAACTTTGGAAAATCTTGTCAAAGGTGGACGAATTGGCCGTGTAACTGGCTTGTTGAGCTCCCTTCTCAATATCCGTGT
TGTCATGCAAATGAAAGACCATGAATTGCAGCCAATGGTTAAAGGTCGTGGAACTAAAACATTTAAAAAATGGTTAGATG
AGTTGATAACATCGCTTTCTGAACGTGCTGTAGCAGAGATTGGAATTTCATATTCTGGTAGTGATGATTGGGCAAAAGAG
ATGAAAGAAAGCTTACAAGCTTATGTTGAAAAGCCAATTTCTGTTTTGGAAACGGGTTCCATTATTCAAACTCACACGGG
TGAGAACGCTTGGGCTATTTTGATACGTTACCACTCCTAA

Upstream 100 bases:

>100_bases
CGGAAAATTTGATTGACTCCATTAGGATTTTTAATCTTTTTTTTGATATAATTAAAAGTAAGGAAACCAATCTGAATCCT
AAAATAGAAAGATTGATACT

Downstream 100 bases:

>100_bases
AAAATAAATAAAATTGGAAGAAATAGCGTTTTTAACTTGACCTAAAAGGGATTTTAGGATATGATTATATTTGTTAATTA
GAAATTATCTGGAGGAATCA

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLPKTSQPPVGVFAEIFEDLCKD
GGQILAIHMSHALSGTVEAARQGASLSTADVIVVDSSFTDQALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGV
STLENLVKGGRIGRVTGLLSSLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE
MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS

Sequences:

>Translated_279_residues
MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLPKTSQPPVGVFAEIFEDLCKD
GGQILAIHMSHALSGTVEAARQGASLSTADVIVVDSSFTDQALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGV
STLENLVKGGRIGRVTGLLSSLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE
MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS
>Mature_278_residues
TKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLPKTSQPPVGVFAEIFEDLCKDG
GQILAIHMSHALSGTVEAARQGASLSTADVIVVDSSFTDQALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVS
TLENLVKGGRIGRVTGLLSSLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKEM
KESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1019_STRR6 (Q8DPT4)

Other databases:

- EMBL:   AE007317
- PIR:   C97999
- RefSeq:   NP_358613.1
- ProteinModelPortal:   Q8DPT4
- SMR:   Q8DPT4
- STRING:   Q8DPT4
- EnsemblBacteria:   EBSTRT00000015152
- GeneID:   934107
- GenomeReviews:   AE007317_GR
- KEGG:   spr:spr1019
- eggNOG:   COG1307
- GeneTree:   EBGT00050000027202
- HOGENOM:   HBG729520
- OMA:   MLKSEEL
- ProtClustDB:   CLSK2460807
- BioCyc:   SPNE171101:SPR1019-MONOMER
- InterPro:   IPR003797
- TIGRFAMs:   TIGR00762

Pfam domain/function: PF02645 DegV

EC number: NA

Molecular weight: Translated: 30669; Mature: 30537

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS51482 DEGV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP
CCEEEEEECCCEEECHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVIVVDSSFTD
CCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRIGRVTGLLS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHH
SLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE
HHHHHHHEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS
HHHHHHHHHHCCHHHHHCCCEEEECCCCCEEEEEEEECC
>Mature Secondary Structure 
TKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP
CEEEEEECCCEEECHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVIVVDSSFTD
CCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRIGRVTGLLS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHH
SLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE
HHHHHHHEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS
HHHHHHHHHHCCHHHHHCCCEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234