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The map label for this gene is ptpA [H]

Identifier: 116517142

GI number: 116517142

Start: 1822592

End: 1823020

Strand: Reverse

Name: ptpA [H]

Synonym: SPD_1837

Alternate gene names: 116517142

Gene position: 1823020-1822592 (Counterclockwise)

Preceding gene: 116516333

Following gene: 116516602

Centisome position: 89.1

GC content: 38.69

Gene sequence:

>429_bases
ATGAAAAAATTAGTCTTTGTCTGTCTGGGAAATATTTGCCGTAGCCCTATGGCCGAGTTTGTTATGAAATCAATGACAGA
TAACTACGAAATCCAAAGTCGAGCAACTTCCTCTTGGGAACATGGCAATCCGATTCATAAGGGGACTCAGGGAATTTTTC
AACAGTATGAGATTCCTTATGACAAGAACAAGACATCGCTTCAGATTAGTAAGGAAGATTTTGAAGCCTTTGATTATATT
ATCGGAATGGACGCTTCAAATATTTCTGACTTACGTCAGATGTGTCCAGTAGACTGTCAAGATAAGATTTACTCATTTTC
ATCTGAAAGTGTTCCAGACCCTTGGTATACAGGAGATTTTGAAGAAACCTATCGACGTGTTCAAGAGGGCTGTCAAGCTT
GGTTAGAACGTTTAGAAAAGGAGAGTTAA

Upstream 100 bases:

>100_bases
ACAGTATTACCGCTGAAAGAAACAGCTTCACTAGAAGGCGCAATTGAAAAATAAGACGGGATCACGAACTCCCGTTTTTC
TATAAAAGAAAGGAAATGGG

Downstream 100 bases:

>100_bases
GGTGGAAAATCTTACGAATTTTTACGAAAAGTATCGTGTCTATCTGACTCGTCCACGTTTAGAGCTTTTGGCAGTAGTTA
CCATTGTTTTCTGTGCTGTA

Product: phosphotyrosine protein phosphatase

Products: NA

Alternate protein names: Phosphotyrosine phosphatase A; PTPase A [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKKLVFVCLGNICRSPMAEFVMKSMTDNYEIQSRATSSWEHGNPIHKGTQGIFQQYEIPYDKNKTSLQISKEDFEAFDYI
IGMDASNISDLRQMCPVDCQDKIYSFSSESVPDPWYTGDFEETYRRVQEGCQAWLERLEKES

Sequences:

>Translated_142_residues
MKKLVFVCLGNICRSPMAEFVMKSMTDNYEIQSRATSSWEHGNPIHKGTQGIFQQYEIPYDKNKTSLQISKEDFEAFDYI
IGMDASNISDLRQMCPVDCQDKIYSFSSESVPDPWYTGDFEETYRRVQEGCQAWLERLEKES
>Mature_142_residues
MKKLVFVCLGNICRSPMAEFVMKSMTDNYEIQSRATSSWEHGNPIHKGTQGIFQQYEIPYDKNKTSLQISKEDFEAFDYI
IGMDASNISDLRQMCPVDCQDKIYSFSSESVPDPWYTGDFEETYRRVQEGCQAWLERLEKES

Specific function: Dephosphorylates the phosphotyrosine-containing proteins [H]

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Homo sapiens, GI4757714, Length=152, Percent_Identity=39.4736842105263, Blast_Score=96, Evalue=7e-21,
Organism=Homo sapiens, GI6005988, Length=152, Percent_Identity=36.8421052631579, Blast_Score=83, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6325330, Length=152, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI78706766, Length=156, Percent_Identity=32.6923076923077, Blast_Score=86, Evalue=7e-18,
Organism=Drosophila melanogaster, GI78706768, Length=156, Percent_Identity=32.6923076923077, Blast_Score=86, Evalue=7e-18,
Organism=Drosophila melanogaster, GI78706770, Length=150, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI78706772, Length=150, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI78706764, Length=132, Percent_Identity=32.5757575757576, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI78711846, Length=153, Percent_Identity=30.718954248366, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 16539; Mature: 16539

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVFVCLGNICRSPMAEFVMKSMTDNYEIQSRATSSWEHGNPIHKGTQGIFQQYEIPY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
DKNKTSLQISKEDFEAFDYIIGMDASNISDLRQMCPVDCQDKIYSFSSESVPDPWYTGDF
CCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCH
EETYRRVQEGCQAWLERLEKES
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLVFVCLGNICRSPMAEFVMKSMTDNYEIQSRATSSWEHGNPIHKGTQGIFQQYEIPY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
DKNKTSLQISKEDFEAFDYIIGMDASNISDLRQMCPVDCQDKIYSFSSESVPDPWYTGDF
CCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCH
EETYRRVQEGCQAWLERLEKES
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA