| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is trkG [H]
Identifier: 116517119
GI number: 116517119
Start: 433009
End: 434448
Strand: Reverse
Name: trkG [H]
Synonym: SPD_0429
Alternate gene names: 116517119
Gene position: 434448-433009 (Counterclockwise)
Preceding gene: 116515316
Following gene: 116517006
Centisome position: 21.23
GC content: 43.68
Gene sequence:
>1440_bases ATGAATAAAAGTATGATTCGTTACCTCCTTTCAAAGTTACTTTTGATTGAAGCTGTTCTCCTCTTGGTTCCTGTGGCTAT CGCTGTCTATTACCGTGAATCGAGCCAAGTCTTTACAGCCCTCTTTTCGACCATAGGGATTCTCGTATTGTTAGGCGGTT CAGGGAATTTACAGAAGCCAAAAAATCAACGGATTTATGCCAAGGAGGGAGTCTTGATCGTTGCCCTCTGTTGGATCCTT TGGTCTTTCTTTGGTGGTCTCCCCTTTGTCTTTTCTGGGCAAATCCCCAGCCTTATTGATGCCTTTTTTGAAATTAGTTC TGGGTTTACAACTACTGGAGCAAGTATTTTGAACGACGTTTCGGTTCTCAGCCGTTCCCTCCTCTTCTGGCGAAGTTTTA CCCACTTGATTGGAGGGATGGGAGTGCTTGTTTTTGCACTTGCTATTATGGACAATGCCAAAAATAGCCACCTAGAGGTG ATGAAGGCTGAGGTTCCAGGTCCTGTTTTTGGCAAGGTTGTATCCAAACTAAAAAACACTGCCCAGATTCTCTATCTCCT TTATCTAGCTCTCTTCTCCCTCTTTGTCATCATCTATTATCTAGCTGGTATGCCTCTCTACGATAGTTTTGTCATTGCTA TGGGGACAGCGGGAACTGGAGGCTTTACCGTCTATAACGACGGAATTGCCCACTATGGCAGCTCACTGATTACCTATCTG GTCAGTATCGGAGTTCTGGTTTTTGGGGTAAATTTCAACCTCTACTACTACCTCATGCTCCGTCGCATCAAGGCCTTCTT TGGTGACGAAGAACTTCGGGCTTACTTGGTCATTGTACTGGTTTCTACAGGCTTGATTAGCCTCAACACCCTCTACCTCT ACCCAGGGTTTTCAAAGAGCTTTGAAATGACCTTCTTCCAGGTTTCCAACATCATTACAACAACTGGTTTTGGATATGGA GATATTACCAACTGGCCCCTCTTCTCCCAGTTTATCCTCCTTTTCCTCATGGCAATCGGTGGCTCTGCTGGATCAACTGC AGGTGGACTCAAGATTATTCGAGGCCTCATCCTTTCAAAAATTGCCAAAAACCAAATTTTGTCAATCCTATCGCCCCACC GTGTTTTGACCCTCCATGTGAATCAAACGGTGATTGATAAAGATACCCAGCATAAGATTCTCAAGTACTTTGTCATCTAT GCTATGATTTTGCTAGCGCTTATCTTTATTGTCAGCCTAGATAGCAATGATTTTCTGGTCGTGACCAGCGCTGTCTTTAG CTGTTTCAATAACATCGGGCCTATTCTAGGAACCACTTCTAGTTTCTCAATCTTTAGTCCCATCTCAAAAATTCTCCTCT CCTTTGCAATGATTGCAGGGCGCTTGGAGATTTACCCAATCCTCCTTCTCTTTATGAAAAGAACTTGGTCTAAGAGATAA
Upstream 100 bases:
>100_bases CCCAACTGGGGAGGATATGTTGGAAGTTGGAGACAAGCTCCTAGTAACAACCTTGTTGCCAAACATCACCAAGATTTATG ACTTGATTGCGAGGTAAGAA
Downstream 100 bases:
>100_bases AATACAAAATCCCTCTTTTTACAATTGTAAAAAGAGGGATTCTTATATTAAAAAAAGGGGGAACGTTTTTAAATCCAAGC CTGTCTGTAAGCAAAGTCCT
Product: potassium uptake protein, Trk family protein
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MNKSMIRYLLSKLLLIEAVLLLVPVAIAVYYRESSQVFTALFSTIGILVLLGGSGNLQKPKNQRIYAKEGVLIVALCWIL WSFFGGLPFVFSGQIPSLIDAFFEISSGFTTTGASILNDVSVLSRSLLFWRSFTHLIGGMGVLVFALAIMDNAKNSHLEV MKAEVPGPVFGKVVSKLKNTAQILYLLYLALFSLFVIIYYLAGMPLYDSFVIAMGTAGTGGFTVYNDGIAHYGSSLITYL VSIGVLVFGVNFNLYYYLMLRRIKAFFGDEELRAYLVIVLVSTGLISLNTLYLYPGFSKSFEMTFFQVSNIITTTGFGYG DITNWPLFSQFILLFLMAIGGSAGSTAGGLKIIRGLILSKIAKNQILSILSPHRVLTLHVNQTVIDKDTQHKILKYFVIY AMILLALIFIVSLDSNDFLVVTSAVFSCFNNIGPILGTTSSFSIFSPISKILLSFAMIAGRLEIYPILLLFMKRTWSKR
Sequences:
>Translated_479_residues MNKSMIRYLLSKLLLIEAVLLLVPVAIAVYYRESSQVFTALFSTIGILVLLGGSGNLQKPKNQRIYAKEGVLIVALCWIL WSFFGGLPFVFSGQIPSLIDAFFEISSGFTTTGASILNDVSVLSRSLLFWRSFTHLIGGMGVLVFALAIMDNAKNSHLEV MKAEVPGPVFGKVVSKLKNTAQILYLLYLALFSLFVIIYYLAGMPLYDSFVIAMGTAGTGGFTVYNDGIAHYGSSLITYL VSIGVLVFGVNFNLYYYLMLRRIKAFFGDEELRAYLVIVLVSTGLISLNTLYLYPGFSKSFEMTFFQVSNIITTTGFGYG DITNWPLFSQFILLFLMAIGGSAGSTAGGLKIIRGLILSKIAKNQILSILSPHRVLTLHVNQTVIDKDTQHKILKYFVIY AMILLALIFIVSLDSNDFLVVTSAVFSCFNNIGPILGTTSSFSIFSPISKILLSFAMIAGRLEIYPILLLFMKRTWSKR >Mature_479_residues MNKSMIRYLLSKLLLIEAVLLLVPVAIAVYYRESSQVFTALFSTIGILVLLGGSGNLQKPKNQRIYAKEGVLIVALCWIL WSFFGGLPFVFSGQIPSLIDAFFEISSGFTTTGASILNDVSVLSRSLLFWRSFTHLIGGMGVLVFALAIMDNAKNSHLEV MKAEVPGPVFGKVVSKLKNTAQILYLLYLALFSLFVIIYYLAGMPLYDSFVIAMGTAGTGGFTVYNDGIAHYGSSLITYL VSIGVLVFGVNFNLYYYLMLRRIKAFFGDEELRAYLVIVLVSTGLISLNTLYLYPGFSKSFEMTFFQVSNIITTTGFGYG DITNWPLFSQFILLFLMAIGGSAGSTAGGLKIIRGLILSKIAKNQILSILSPHRVLTLHVNQTVIDKDTQHKILKYFVIY AMILLALIFIVSLDSNDFLVVTSAVFSCFNNIGPILGTTSSFSIFSPISKILLSFAMIAGRLEIYPILLLFMKRTWSKR
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=487, Percent_Identity=31.4168377823409, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI48994987, Length=472, Percent_Identity=31.3559322033898, Blast_Score=184, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52938; Mature: 52938
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSMIRYLLSKLLLIEAVLLLVPVAIAVYYRESSQVFTALFSTIGILVLLGGSGNLQKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCCCCC KNQRIYAKEGVLIVALCWILWSFFGGLPFVFSGQIPSLIDAFFEISSGFTTTGASILNDV CCCCEEHHCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHH SVLSRSLLFWRSFTHLIGGMGVLVFALAIMDNAKNSHLEVMKAEVPGPVFGKVVSKLKNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHHHHH AQILYLLYLALFSLFVIIYYLAGMPLYDSFVIAMGTAGTGGFTVYNDGIAHYGSSLITYL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCEEEECCCHHHHHHHHHHHH VSIGVLVFGVNFNLYYYLMLRRIKAFFGDEELRAYLVIVLVSTGLISLNTLYLYPGFSKS HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEEEEEEECCCCCC FEMTFFQVSNIITTTGFGYGDITNWPLFSQFILLFLMAIGGSAGSTAGGLKIIRGLILSK HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IAKNQILSILSPHRVLTLHVNQTVIDKDTQHKILKYFVIYAMILLALIFIVSLDSNDFLV HHHHHHHHHHCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VTSAVFSCFNNIGPILGTTSSFSIFSPISKILLSFAMIAGRLEIYPILLLFMKRTWSKR HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKSMIRYLLSKLLLIEAVLLLVPVAIAVYYRESSQVFTALFSTIGILVLLGGSGNLQKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCCCCC KNQRIYAKEGVLIVALCWILWSFFGGLPFVFSGQIPSLIDAFFEISSGFTTTGASILNDV CCCCEEHHCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHH SVLSRSLLFWRSFTHLIGGMGVLVFALAIMDNAKNSHLEVMKAEVPGPVFGKVVSKLKNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHHHHH AQILYLLYLALFSLFVIIYYLAGMPLYDSFVIAMGTAGTGGFTVYNDGIAHYGSSLITYL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCEEEECCCHHHHHHHHHHHH VSIGVLVFGVNFNLYYYLMLRRIKAFFGDEELRAYLVIVLVSTGLISLNTLYLYPGFSKS HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEEEEEEECCCCCC FEMTFFQVSNIITTTGFGYGDITNWPLFSQFILLFLMAIGGSAGSTAGGLKIIRGLILSK HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IAKNQILSILSPHRVLTLHVNQTVIDKDTQHKILKYFVIYAMILLALIFIVSLDSNDFLV HHHHHHHHHHCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VTSAVFSCFNNIGPILGTTSSFSIFSPISKILLSFAMIAGRLEIYPILLLFMKRTWSKR HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]