| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116517060
Identifier: 116517060
GI number: 116517060
Start: 792612
End: 793778
Strand: Direct
Name: 116517060
Synonym: SPD_0781
Alternate gene names: NA
Gene position: 792612-793778 (Clockwise)
Preceding gene: 116516246
Following gene: 116515872
Centisome position: 38.74
GC content: 41.9
Gene sequence:
>1167_bases ATGAATTACCTTGTTATTTCTCCCTACTATCCACAAAACTTTCAACAGTTTACCATCGAACTAGCTAATAAAGGCATCAC AGTCTTGGGAATTGGTCAAGGGTCTTACGAGCAATTGGATGAGCCCTTGCGCAATAGCTTGACCGAGTATTTTCGTGTTG ATAATCTTGAGAACATAGATGAAGTCAAACGTGCAGTTGCTTTTCTCTTTTATAAACATGGTCCAATTGGCCGCATCGAG TCTCACAATGAATACTGGCTTGAGCTAGACGCAACACTCAGAGAACAATTCAATGTTTTTGGTGCCAAACCAGAGGATCT CAAAAAGACGAAATATAAGTCTGAAATGAAGAAACTTTTCAAAAAAGCAGGTGTTCCTGTGGTACCTGGAGCTGTTATCA AGACGGAAGCAGATGTTGATCAAGCAGTGAAAGAAATCGGTCTTCCAATGATTGCCAAACCTGATAATGGAGTGGGAGCA GCCGCAACCTTTAAACTTGAGACAGAAGACGATATCAATCACTTCAAGCAAGAATGGGACCATTCAACCCTTTATTTCTT TGAAAAATTTGTCACTTCCAGCGAAATCTGTACCTTTGACGGGCTCGTGGACAAGGATGGAAAGATTGTCTTCTCAACAA CCTTTGACTACGCCTATACACCGCTTGACCTCATGATTTATAAGATGGACAATTCTTATTATGTGCTCAAGGATATGGAT CCTAAACTGCGCAAGTATGGGGAAGCAATTGTCAAAGAATTTGGTATGAAAGAACGGTTTTTCCATATTGAGTTCTTCCG TGAGGGGGACGATTATATTACCATCGAGTACAATAACCGCCCTGCAGGTGGTTTTACCATTGATGTTTATAACTTTGCTC ATTCCTTGGACCTTTATCGTGGCTATGCAGCTATTGTCGCAGGAGAGGAGTTCCCGGCGTCAGACTTTGAAACTCAGTAT TGTTTGGCTACTTCTCGCCGTGCAAATGCTCACTATGTTTATTCAGAAGAGGATTTGCTTGCCAAATATAGCCAGCAGTT CAAGGTTAAAAAAGTCATGCCAGCTGCCTTCGCGGAACTTCAAGGAGATTACCTGTATATGCTGACCACTCCGAGTCGAC AAGAAATGGAGCAGATGATTGCAGATTTCGGACAACGTCAAGAATAA
Upstream 100 bases:
>100_bases GTTTGCTGAATGGGGACATGATGTCGCCCATGACTGGGAATGGTGGCGTAAACAAATGCCTTATTTCCTCGGTAATCTCT ATTTATAAAAGGAGTTACCT
Downstream 100 bases:
>100_bases GAACTATCGGATTAAGGAAATTAACTCCCTTAATCCTTTTGTTTTGTCTGATAAAAAATAAGAGCATCCCAACAAGGTAG CTATCATAAAACTTGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNYLVISPYYPQNFQQFTIELANKGITVLGIGQGSYEQLDEPLRNSLTEYFRVDNLENIDEVKRAVAFLFYKHGPIGRIE SHNEYWLELDATLREQFNVFGAKPEDLKKTKYKSEMKKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPMIAKPDNGVGA AATFKLETEDDINHFKQEWDHSTLYFFEKFVTSSEICTFDGLVDKDGKIVFSTTFDYAYTPLDLMIYKMDNSYYVLKDMD PKLRKYGEAIVKEFGMKERFFHIEFFREGDDYITIEYNNRPAGGFTIDVYNFAHSLDLYRGYAAIVAGEEFPASDFETQY CLATSRRANAHYVYSEEDLLAKYSQQFKVKKVMPAAFAELQGDYLYMLTTPSRQEMEQMIADFGQRQE
Sequences:
>Translated_388_residues MNYLVISPYYPQNFQQFTIELANKGITVLGIGQGSYEQLDEPLRNSLTEYFRVDNLENIDEVKRAVAFLFYKHGPIGRIE SHNEYWLELDATLREQFNVFGAKPEDLKKTKYKSEMKKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPMIAKPDNGVGA AATFKLETEDDINHFKQEWDHSTLYFFEKFVTSSEICTFDGLVDKDGKIVFSTTFDYAYTPLDLMIYKMDNSYYVLKDMD PKLRKYGEAIVKEFGMKERFFHIEFFREGDDYITIEYNNRPAGGFTIDVYNFAHSLDLYRGYAAIVAGEEFPASDFETQY CLATSRRANAHYVYSEEDLLAKYSQQFKVKKVMPAAFAELQGDYLYMLTTPSRQEMEQMIADFGQRQE >Mature_388_residues MNYLVISPYYPQNFQQFTIELANKGITVLGIGQGSYEQLDEPLRNSLTEYFRVDNLENIDEVKRAVAFLFYKHGPIGRIE SHNEYWLELDATLREQFNVFGAKPEDLKKTKYKSEMKKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPMIAKPDNGVGA AATFKLETEDDINHFKQEWDHSTLYFFEKFVTSSEICTFDGLVDKDGKIVFSTTFDYAYTPLDLMIYKMDNSYYVLKDMD PKLRKYGEAIVKEFGMKERFFHIEFFREGDDYITIEYNNRPAGGFTIDVYNFAHSLDLYRGYAAIVAGEEFPASDFETQY CLATSRRANAHYVYSEEDLLAKYSQQFKVKKVMPAAFAELQGDYLYMLTTPSRQEMEQMIADFGQRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44838; Mature: 44838
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLVISPYYPQNFQQFTIELANKGITVLGIGQGSYEQLDEPLRNSLTEYFRVDNLENID CCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH EVKRAVAFLFYKHGPIGRIESHNEYWLELDATLREQFNVFGAKPEDLKKTKYKSEMKKLF HHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KKAGVPVVPGAVIKTEADVDQAVKEIGLPMIAKPDNGVGAAATFKLETEDDINHFKQEWD HHCCCCCCCCCEEEECCHHHHHHHHHCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHCC HSTLYFFEKFVTSSEICTFDGLVDKDGKIVFSTTFDYAYTPLDLMIYKMDNSYYVLKDMD CCHHHHHHHHHCCCCCEEECCEECCCCCEEEEEECCCEECCEEEEEEEECCCEEEEECCC PKLRKYGEAIVKEFGMKERFFHIEFFREGDDYITIEYNNRPAGGFTIDVYNFAHSLDLYR HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHC GYAAIVAGEEFPASDFETQYCLATSRRANAHYVYSEEDLLAKYSQQFKVKKVMPAAFAEL CEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC QGDYLYMLTTPSRQEMEQMIADFGQRQE CCCEEEEEECCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNYLVISPYYPQNFQQFTIELANKGITVLGIGQGSYEQLDEPLRNSLTEYFRVDNLENID CCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH EVKRAVAFLFYKHGPIGRIESHNEYWLELDATLREQFNVFGAKPEDLKKTKYKSEMKKLF HHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KKAGVPVVPGAVIKTEADVDQAVKEIGLPMIAKPDNGVGAAATFKLETEDDINHFKQEWD HHCCCCCCCCCEEEECCHHHHHHHHHCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHCC HSTLYFFEKFVTSSEICTFDGLVDKDGKIVFSTTFDYAYTPLDLMIYKMDNSYYVLKDMD CCHHHHHHHHHCCCCCEEECCEECCCCCEEEEEECCCEECCEEEEEEEECCCEEEEECCC PKLRKYGEAIVKEFGMKERFFHIEFFREGDDYITIEYNNRPAGGFTIDVYNFAHSLDLYR HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHC GYAAIVAGEEFPASDFETQYCLATSRRANAHYVYSEEDLLAKYSQQFKVKKVMPAAFAEL CEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC QGDYLYMLTTPSRQEMEQMIADFGQRQE CCCEEEEEECCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA