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The map label for this gene is 116517025

Identifier: 116517025

GI number: 116517025

Start: 557013

End: 557591

Strand: Direct

Name: 116517025

Synonym: SPD_0543

Alternate gene names: NA

Gene position: 557013-557591 (Clockwise)

Preceding gene: 116515781

Following gene: 116515955

Centisome position: 27.22

GC content: 44.39

Gene sequence:

>579_bases
ATGTCTCAAATCGAAAGAATCAAACAGGCTATCATGGCGGATTCGCAGAATGCCAGCTATACAGAGCGTGGCATTGAGCT
TCTCTTTGCAGCGCCAAAAACTGCTCGCATCAATATCATCGGTCAGGCTCCGGGACTTAAAACTCAAGAAGCAGGCCTTT
ACTGGAAAGATAAAAGTGGTGACCGCTTGCGGGACTGGCTAGGTGTGGATGAAGATACCTTTTACAATTCAGGTTATTTT
GCTGTTTTGCCTATGGATTTCTACTTTCCAGGACATGGCAAGTCGGGTGATCTTCCGCCTCGTACAGGTTTTGCAGAAAA
ATGGCATCCGCAGGTCTTACAGGAATTGCCTGATATTCAGTTAACCCTCTTGATTGGGCAATATGCCCAAGCCTACTATT
TACAGGAGAAAATCAGTGGGAAGGTAACGGAGAGGGTGAAACACTATAAAGCCTATCTGCCAGCCTATTTTCCGCTAGTT
CACCCATCACCACGAAATCAAATCTGGATGGCCAAAAATCCTTGGTTTGAGGCAGAAGTAGTGCCAGATTTGAAAAAAAG
AATTAAAACCATTTTATAG

Upstream 100 bases:

>100_bases
GAGCAGCAGCAATTTATGCCGAAGCTATTTACGAATTGATCAAATAAAACGATAGAAGTCTGAGATCTTATGCTTGGACT
TCTTTTTGGAGGGAAAGTAG

Downstream 100 bases:

>100_bases
TCAATGAAAATCAAAGAGCAAACTAGGAAGCTAGTCGTAGGCTGCTCAAAGTACAGCTTTGAAGTTGCAGATAAAACTGA
CGAAGTCGGTAACATACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSQIERIKQAIMADSQNASYTERGIELLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYF
AVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKAYLPAYFPLV
HPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL

Sequences:

>Translated_192_residues
MSQIERIKQAIMADSQNASYTERGIELLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYF
AVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKAYLPAYFPLV
HPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL
>Mature_191_residues
SQIERIKQAIMADSQNASYTERGIELLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFA
VLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKAYLPAYFPLVH
PSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22048; Mature: 21916

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIERIKQAIMADSQNASYTERGIELLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG
CCHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCC
DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQ
CHHHHHCCCCCCCEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCE
LTLLIGQYAQAYYLQEKISGKVTERVKHYKAYLPAYFPLVHPSPRNQIWMAKNPWFEAEV
EEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEE
VPDLKKRIKTIL
CHHHHHHHHHCC
>Mature Secondary Structure 
SQIERIKQAIMADSQNASYTERGIELLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG
CHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCC
DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQ
CHHHHHCCCCCCCEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCE
LTLLIGQYAQAYYLQEKISGKVTERVKHYKAYLPAYFPLVHPSPRNQIWMAKNPWFEAEV
EEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEE
VPDLKKRIKTIL
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]