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The map label for this gene is dexB [H]

Identifier: 116517011

GI number: 116517011

Start: 310716

End: 312323

Strand: Direct

Name: dexB [H]

Synonym: SPD_0311

Alternate gene names: 116517011

Gene position: 310716-312323 (Clockwise)

Preceding gene: 116515968

Following gene: 116516728

Centisome position: 15.19

GC content: 42.48

Gene sequence:

>1608_bases
ATGCAAGAAAAATGGTGGCATAATGCCGTAGTCTATCAAGTCTATCCAAAGAGTTTTATGGATAGTAATGAAGATGGAGT
TGGTGATTTGCCAGGAATTACCAGTAAGTTGGACTATCTAGCCAAGCTAGGAATCACAGCAATTTGGCTTTCTCCCGTTT
ATGACAGCCCTATGGATGATAATGGCTATGATATTGCTGATTATCAAGCGATTGCGGCTATTTTTGGAACCATGGAGGAC
ATGGATCAGCTGATTGCAGAAGCTAAGAAGCGTGATATCCGTATCATCATGGACTTGGTGGTCAATCATACCTCGGATGA
GCATGCCTGGTTTGTAGAGGCCTGTGAAAATCCTAATAGCCCTGAGCGAGACTACTATATCTGGCGGGATGAGCCTAACG
ATTTAGATTCTATTTTTAGTGGATCTGCTTGGGAATACGATGAAAAATCTGGTCAATACTATCTCCACTTTTTCAGCAAG
AAACAGCCGGATCTCAATTGGGAAAATGAAAAACTTCGCCAGAAAATTTATGAGATGATGGACTTCTGGATTGATAAAGG
TATTGGTGGTTTCCGTATGGATGTTATTGACATGATTGGCAAAATTCCTGACGAGAAGGTAGTCAATAATGGTCCTATGC
TCCATCCCTATCTCAAGGAAATGAATCAGGCGACCTTTGGAGATAAGGATCTCTTGACAGTAGGGGAGACTTGGGGAGCA
ACGCCAGAGATTGCCAAGCTCTACTCTGATCCAAAGGGGCAAGAATTGTCTATGGTCTTCCAGTTTGAACATATCGGTCT
TCAGTATCAGGAAGGTCAGCCTAAATGGCACTATCAAAAAGAGCTGAATATCGCTAAGTTAAAAGAAATCTTCAACAAAT
GGCAGACAGAGTTAGGAGTTGAGGACGGTTGGAATTCCCTCTTCTGGAACAATCATGACCTCCCTCGTATTGTCTCAATC
TGGGGAAATGACCAAGAATACCGCGAAAAATCTGCCAAAGCCTTTGCAATCTTGCTTCATCTTATGAGAGGAACTCCTTA
TATCTACCAAGGTGAGGAGATTGGGATGACCAACTATCCGTTTGAAACACTGGATCAAGTAGAAGATATTGAATCTCTCA
ACTATGCGCGTGAGGCTCTTGAAAAAGGTGTTCCGATTGAAGAAATCATGGACAGTATCCGTGTTATTGGACGTGACAAT
GCCCGTACCCCTATGCAATGGGACGAGAGCAAAAACGCTGGTTTCTCAACAGGTCAACCTTGGTTGGCGGTTAATCCAAA
TTACGAGATGATCAACGTCCAAGAAGCGCTGGCAAATCCAGATTCTATTTTCTATACCTATCAGAAACTGGTCCAAATTC
GCAAGGAGAATAGCTGGCTAATTCGAGCTGACTTTGAATTGCTTGATACGGCTGATAAGGTCTTTGCTTATATACGTAAG
GATGGCGACCGTCGCTTCCTAGTTGTGGCTAACTTGTCCAATGAAGAGCAAGACTTGACAGTAGAAGGAAACGTCAAATC
TGTCTTGATTGAAAACACCCTAGCTCAAGAAGTCTTTGAAAAACAAATCTTAGTTCCATGGGATGCTTTCTGTGTGGAAT
TACTATAA

Upstream 100 bases:

>100_bases
GGAGTTAAAAAAGGAATCAAAAAGATTAGGCAAACGCTTGCACAAAATTTTAAAAAGTGCTATCATAGACTATAGATTAT
GAAAATAATGAGGTAAGAAG

Downstream 100 bases:

>100_bases
ATATTTTTTGCAGAAAAATTTAAAATTGAAATCATATAAAAACAAGGGAGGACTGTATAAAAAGCAGAAATCCTTTGTTT
TTTATAACCAAAGTTTATAA

Product: glucan 1,6-alpha-glucosidase

Products: NA

Alternate protein names: Dextran glucosidase; Exo-1,6-alpha-glucosidase; Glucodextranase [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MQEKWWHNAVVYQVYPKSFMDSNEDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDDNGYDIADYQAIAAIFGTMED
MDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNSPERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSK
KQPDLNWENEKLRQKIYEMMDFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGVEDGWNSLFWNNHDLPRIVSI
WGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYPFETLDQVEDIESLNYAREALEKGVPIEEIMDSIRVIGRDN
ARTPMQWDESKNAGFSTGQPWLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
DGDRRFLVVANLSNEEQDLTVEGNVKSVLIENTLAQEVFEKQILVPWDAFCVELL

Sequences:

>Translated_535_residues
MQEKWWHNAVVYQVYPKSFMDSNEDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDDNGYDIADYQAIAAIFGTMED
MDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNSPERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSK
KQPDLNWENEKLRQKIYEMMDFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGVEDGWNSLFWNNHDLPRIVSI
WGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYPFETLDQVEDIESLNYAREALEKGVPIEEIMDSIRVIGRDN
ARTPMQWDESKNAGFSTGQPWLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
DGDRRFLVVANLSNEEQDLTVEGNVKSVLIENTLAQEVFEKQILVPWDAFCVELL
>Mature_535_residues
MQEKWWHNAVVYQVYPKSFMDSNEDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDDNGYDIADYQAIAAIFGTMED
MDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNSPERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSK
KQPDLNWENEKLRQKIYEMMDFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGVEDGWNSLFWNNHDLPRIVSI
WGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYPFETLDQVEDIESLNYAREALEKGVPIEEIMDSIRVIGRDN
ARTPMQWDESKNAGFSTGQPWLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
DGDRRFLVVANLSNEEQDLTVEGNVKSVLIENTLAQEVFEKQILVPWDAFCVELL

Specific function: The physiological substrates may be short isomaltosaccharides [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=521, Percent_Identity=30.9021113243762, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI61744481, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI61744483, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI65506891, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI61744479, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI61744475, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI61744477, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1790687, Length=509, Percent_Identity=46.3654223968566, Blast_Score=464, Evalue=1e-132,
Organism=Escherichia coli, GI1786604, Length=187, Percent_Identity=32.620320855615, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789995, Length=132, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147709, Length=495, Percent_Identity=25.6565656565657, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32565753, Length=199, Percent_Identity=31.1557788944724, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6322245, Length=578, Percent_Identity=37.19723183391, Blast_Score=366, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6321726, Length=582, Percent_Identity=36.254295532646, Blast_Score=356, Evalue=6e-99,
Organism=Saccharomyces cerevisiae, GI6322241, Length=579, Percent_Identity=36.4421416234888, Blast_Score=347, Evalue=3e-96,
Organism=Saccharomyces cerevisiae, GI6322021, Length=579, Percent_Identity=36.4421416234888, Blast_Score=347, Evalue=3e-96,
Organism=Saccharomyces cerevisiae, GI6324416, Length=579, Percent_Identity=36.4421416234888, Blast_Score=347, Evalue=3e-96,
Organism=Saccharomyces cerevisiae, GI6319776, Length=577, Percent_Identity=33.9688041594454, Blast_Score=322, Evalue=1e-88,
Organism=Saccharomyces cerevisiae, GI6321731, Length=577, Percent_Identity=33.7954939341421, Blast_Score=320, Evalue=3e-88,
Organism=Drosophila melanogaster, GI221330053, Length=534, Percent_Identity=34.2696629213483, Blast_Score=280, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24586593, Length=534, Percent_Identity=33.7078651685393, Blast_Score=275, Evalue=6e-74,
Organism=Drosophila melanogaster, GI24583745, Length=590, Percent_Identity=32.8813559322034, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24583747, Length=535, Percent_Identity=33.4579439252336, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24583749, Length=535, Percent_Identity=33.4579439252336, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24586597, Length=535, Percent_Identity=31.9626168224299, Blast_Score=258, Evalue=9e-69,
Organism=Drosophila melanogaster, GI24586589, Length=549, Percent_Identity=31.1475409836066, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24586587, Length=588, Percent_Identity=31.1224489795918, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24586591, Length=535, Percent_Identity=33.0841121495327, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24586599, Length=520, Percent_Identity=31.9230769230769, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI45549022, Length=575, Percent_Identity=30.7826086956522, Blast_Score=244, Evalue=8e-65,
Organism=Drosophila melanogaster, GI281360393, Length=480, Percent_Identity=30.2083333333333, Blast_Score=198, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.70 [H]

Molecular weight: Translated: 62188; Mature: 62188

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKWWHNAVVYQVYPKSFMDSNEDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDD
CCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC
NGYDIADYQAIAAIFGTMEDMDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEHEECCCCCC
PERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSKKQPDLNWENEKLRQKIYEMM
CCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
DFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
HHHHHCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCC
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGV
CHHHHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCC
EDGWNSLFWNNHDLPRIVSIWGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYP
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
FETLDQVEDIESLNYAREALEKGVPIEEIMDSIRVIGRDNARTPMQWDESKNAGFSTGQP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
WLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
EEEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHC
DGDRRFLVVANLSNEEQDLTVEGNVKSVLIENTLAQEVFEKQILVPWDAFCVELL
CCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure
MQEKWWHNAVVYQVYPKSFMDSNEDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDD
CCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC
NGYDIADYQAIAAIFGTMEDMDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEHEECCCCCC
PERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSKKQPDLNWENEKLRQKIYEMM
CCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
DFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
HHHHHCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCC
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGV
CHHHHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCC
EDGWNSLFWNNHDLPRIVSIWGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYP
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
FETLDQVEDIESLNYAREALEKGVPIEEIMDSIRVIGRDNARTPMQWDESKNAGFSTGQP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
WLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
EEEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHC
DGDRRFLVVANLSNEEQDLTVEGNVKSVLIENTLAQEVFEKQILVPWDAFCVELL
CCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916; 8566758; 8021229; 9466257; 9383201 [H]