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The map label for this gene is ypaA [H]

Identifier: 116517003

GI number: 116517003

Start: 1851003

End: 1851302

Strand: Reverse

Name: ypaA [H]

Synonym: SPD_1871

Alternate gene names: 116517003

Gene position: 1851302-1851003 (Counterclockwise)

Preceding gene: 116515344

Following gene: 116515515

Centisome position: 90.48

GC content: 33.0

Gene sequence:

>300_bases
ATGTCAATTATTTTAACAACGATCGTTGCTTTGGAGCATTTTTACATTTTTTATTTGGAAAGTATTGCCACGCAATCAGA
TGCGACTAGTCGTGTATTTAATATGGAAAAGGAAGAATTGGCTCATCCGTCAGTAAGTTCATTGTTCAAAAATCAAGGAA
TTTATAAGGCTCTGCTAGGAGTCTTTCTCTTGTATGTCATTTATTTCTCACATAATTTAGAAATTGTGACTATTTTTGTC
TTATTTGTGATTGGTGCTGCGACTTACGGCTCTTTAACAGCGGATAAAAAATTATTTTGA

Upstream 100 bases:

>100_bases
ATGGAAAGTATCTTAACAGAGTTTGAGAGAACAGAACTCAGCCGTTTATTAAATAAATTGGTTTTGGGTATTGAAAATAT
AGAAATTTAAGGAGAAATAG

Downstream 100 bases:

>100_bases
AGCAAGGTGGATCAGCTATTTTGGCCTTGATTAGTATTTTACTCTTTAAATACACTTGAAGGTCGATTCTAATCTCGCTA
ATCCTTTTTAATCCAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLLYVIYFSHNLEIVTIFV
LFVIGAATYGSLTADKKLF

Sequences:

>Translated_99_residues
MSIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLLYVIYFSHNLEIVTIFV
LFVIGAATYGSLTADKKLF
>Mature_98_residues
SIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLLYVIYFSHNLEIVTIFVL
FVIGAATYGSLTADKKLF

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 11177; Mature: 11046

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHH
VFLLYVIYFSHNLEIVTIFVLFVIGAATYGSLTADKKLF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHH
VFLLYVIYFSHNLEIVTIFVLFVIGAATYGSLTADKKLF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]