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The map label for this gene is 116516956

Identifier: 116516956

GI number: 116516956

Start: 1946540

End: 1948219

Strand: Reverse

Name: 116516956

Synonym: SPD_1974

Alternate gene names: NA

Gene position: 1948219-1946540 (Counterclockwise)

Preceding gene: 116516541

Following gene: 116517029

Centisome position: 95.22

GC content: 46.9

Gene sequence:

>1680_bases
ATGAAGAAAATCAAACCGCATGGACCGTTACCAAGTCAGACTCAGCTAGCTTATCTGGGAGATGAACTAGCAGCTTTTAT
CCACTTCGGTCCTAATACCTTTTATGACCAAGAATGGGGGACTGGACAGGAGGATCCTGAGCGCTTTAACCCGAGTCAGT
TGGATGCGCGTGAGTGGGTTCGTGTGCTCAAGGAAACGGGCTTCAAAAAGTTGATTTTGGTGGTCAAGCACCACGATGGC
TTTGTCCTTTATCCGACAGCTCACACAGATTATTCGGTTAAGGTCAGTCCTTGGAGGAGAGGAAAGGGCGACTTGCTCCT
TGAAGTATCCCAAGCTGCCACAGAGTTTGATATGGATATGGGGGTCTACCTGTCACCGTGGGATGCCCATAGTCCCCTCT
ATCATGTGGACCGAGAAGCGGACTACAATGCCTATTATCTGGCTCAGTTGAAGGAAATCTTATCAAATCCTAACTATGGG
AATGCTGGTAAGTTCGCTGAGGTTTGGATGGATGGTGCCAGAGGAGAGGGCGCGCAAAAGGTTAATTATGAATTTGAAAA
ATGGTTTGAAACCATTCGTGACCTGCAGGGCGATTGCTTGATTTTTTCAACAGAAGGCACCAGTATCCGCTGGATTGGCA
ATGAACGAGGGTATGCAGGTGATCCACTGTGGCAAAAGGTGAATCTTGATAAACTAGGAACAGAAGCAGAGCTGAACTAT
CTTCAGCACGGGGATCCCTCGGGCACGATTTTTTCAATCGGAGAGGCAGATGTTTCCATCCGTCCAGGCTGGTTCTACCA
TGAGGATCAGGATCCTAAGTCTCTCGAGGAGTTGGTCGAAATCTACTTTCACTCAGTAGGGCGAGGAACTCCACTCTTGC
TTAATATTCCGCCGAATCAAGCTGGGCTCTTTGATGCAAAGGATATTGAACGACTTTATGAATTTGCGACCTATCGCAAT
GAGCTCTATAAAGAAGATTTGGCTCTGGGAGCTGAGGTATCTGGTCCAGCTCTTTCCGCAGACTTTGATTGTCGCCATTT
GACAGACGGCCTTGAGACCAGCTCTTGGGCAAGCGATGCAGACTTGCCCATCCAGTTAGAACTCGATTTAGGTTCTCCTA
AAACTTTTGATGTAATTGAGTTAAGAGAAGATTTGAAGCTAGGGCAACGAATCGCTGCTTTTCATGTGCAAGTAGAGGTG
GATGGTGTCTGGCAGGAGTTTGGCAGGGGCTTCACAGTTGGTCATAAGCGCCTCTTGCGAGGTCCGCTAGTAGAGGCACA
AAAGGTGCGCGTGATGATTACCGAGGCACAATCTATCCCTGTATTGACCAAGATTTCCCTTTATAAAACTCCTGGGTTAT
CAAAAAAAGAAGTTGTTCAGGAACTAGCATTTGCAGAAAAAAGCCTAGCTGTGGCAAAGGGAGAGACTCTTCATTTTAGG
ATTGAACGTAGTGAAAGTAGCTCCTCTTTAGAGGCTAAGATTTCGATTCAACCGGGGACAGGTGTCCATGGTGTCGCCTA
TCAGGACGAGATTTATGCCCTTGCGTTTCAAGCTGGTGAGACTGAAAAAAGGCTGACGCTACCAACCTTGTATTTCGCAG
GAGATAAAACCTTGGATTTCTATCTGAACCTAACGGTGGATGGTCAGCTTGTGGATCAACTTCAAGTCCAAGTTTCATAA

Upstream 100 bases:

>100_bases
GGAGTTGGAAAGAGCTGGCTGTTAGATCATGGTTTATTATCCACAACCTGTGGATAATCTTGTGAACAAGAGAAGTTGCA
AAAGAAGGAGATATATAACG

Downstream 100 bases:

>100_bases
AAGAAGAACCTTTGCGCGATGCAAAGGTTCTTTTGGTTATTAGTGATTTGGTAGCCAGCTGAGGGTGAAAGTTAGTTGTT
CAGCTTTTAGGAGGTCTTGG

Product: hypothetical protein

Products: L-fucose; alcohol

Alternate protein names: Glycoside Hydrolase Family; Coagulation Factor 5/8 Type Domain Protein; Alpha-1 3/4-Fucosidase; Calx-Beta Domain-Containing Protein; Lipoprotein; Exported Alpha-L-Fucosidase Protein; Exported Fucosidase; Coagulation Factor 5/8 Type Domain-Containing Protein; Alpha-L-Fucosidase-Like Protein; Ig Domain-Containing; Twin-Arginine Translocation Pathway Signal; Fucosidase; Tat Pathway Signal Sequence Domain Protein; Alpha-L-Fucosidase Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; DS Domain-Containing Protein; Glycoside Hydrolase; Glycoside Hydrolase Family Alpha-L-Fucosidase

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MKKIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPSQLDAREWVRVLKETGFKKLILVVKHHDG
FVLYPTAHTDYSVKVSPWRRGKGDLLLEVSQAATEFDMDMGVYLSPWDAHSPLYHVDREADYNAYYLAQLKEILSNPNYG
NAGKFAEVWMDGARGEGAQKVNYEFEKWFETIRDLQGDCLIFSTEGTSIRWIGNERGYAGDPLWQKVNLDKLGTEAELNY
LQHGDPSGTIFSIGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQAGLFDAKDIERLYEFATYRN
ELYKEDLALGAEVSGPALSADFDCRHLTDGLETSSWASDADLPIQLELDLGSPKTFDVIELREDLKLGQRIAAFHVQVEV
DGVWQEFGRGFTVGHKRLLRGPLVEAQKVRVMITEAQSIPVLTKISLYKTPGLSKKEVVQELAFAEKSLAVAKGETLHFR
IERSESSSSLEAKISIQPGTGVHGVAYQDEIYALAFQAGETEKRLTLPTLYFAGDKTLDFYLNLTVDGQLVDQLQVQVS

Sequences:

>Translated_559_residues
MKKIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPSQLDAREWVRVLKETGFKKLILVVKHHDG
FVLYPTAHTDYSVKVSPWRRGKGDLLLEVSQAATEFDMDMGVYLSPWDAHSPLYHVDREADYNAYYLAQLKEILSNPNYG
NAGKFAEVWMDGARGEGAQKVNYEFEKWFETIRDLQGDCLIFSTEGTSIRWIGNERGYAGDPLWQKVNLDKLGTEAELNY
LQHGDPSGTIFSIGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQAGLFDAKDIERLYEFATYRN
ELYKEDLALGAEVSGPALSADFDCRHLTDGLETSSWASDADLPIQLELDLGSPKTFDVIELREDLKLGQRIAAFHVQVEV
DGVWQEFGRGFTVGHKRLLRGPLVEAQKVRVMITEAQSIPVLTKISLYKTPGLSKKEVVQELAFAEKSLAVAKGETLHFR
IERSESSSSLEAKISIQPGTGVHGVAYQDEIYALAFQAGETEKRLTLPTLYFAGDKTLDFYLNLTVDGQLVDQLQVQVS
>Mature_559_residues
MKKIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPSQLDAREWVRVLKETGFKKLILVVKHHDG
FVLYPTAHTDYSVKVSPWRRGKGDLLLEVSQAATEFDMDMGVYLSPWDAHSPLYHVDREADYNAYYLAQLKEILSNPNYG
NAGKFAEVWMDGARGEGAQKVNYEFEKWFETIRDLQGDCLIFSTEGTSIRWIGNERGYAGDPLWQKVNLDKLGTEAELNY
LQHGDPSGTIFSIGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQAGLFDAKDIERLYEFATYRN
ELYKEDLALGAEVSGPALSADFDCRHLTDGLETSSWASDADLPIQLELDLGSPKTFDVIELREDLKLGQRIAAFHVQVEV
DGVWQEFGRGFTVGHKRLLRGPLVEAQKVRVMITEAQSIPVLTKISLYKTPGLSKKEVVQELAFAEKSLAVAKGETLHFR
IERSESSSSLEAKISIQPGTGVHGVAYQDEIYALAFQAGETEKRLTLPTLYFAGDKTLDFYLNLTVDGQLVDQLQVQVS

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.51

Molecular weight: Translated: 62881; Mature: 62881

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPSQLDAREWV
CCCCCCCCCCCCCCEEEHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RVLKETGFKKLILVVKHHDGFVLYPTAHTDYSVKVSPWRRGKGDLLLEVSQAATEFDMDM
HHHHHCCCEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCEEEEEHHHHHHCCCCC
GVYLSPWDAHSPLYHVDREADYNAYYLAQLKEILSNPNYGNAGKFAEVWMDGARGEGAQK
CCEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
VNYEFEKWFETIRDLQGDCLIFSTEGTSIRWIGNERGYAGDPLWQKVNLDKLGTEAELNY
CCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEECCHHHCCCHHHHHH
LQHGDPSGTIFSIGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQ
HHCCCCCCCEEEECCCCEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
AGLFDAKDIERLYEFATYRNELYKEDLALGAEVSGPALSADFDCRHLTDGLETSSWASDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
DLPIQLELDLGSPKTFDVIELREDLKLGQRIAAFHVQVEVDGVWQEFGRGFTVGHKRLLR
CCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEEEEECHHHHHHCCCEEHHHHHHHH
GPLVEAQKVRVMITEAQSIPVLTKISLYKTPGLSKKEVVQELAFAEKSLAVAKGETLHFR
CCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEECCCEEEEE
IERSESSSSLEAKISIQPGTGVHGVAYQDEIYALAFQAGETEKRLTLPTLYFAGDKTLDF
EECCCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCEEEE
YLNLTVDGQLVDQLQVQVS
EEEEEECCCEEEEEEEEEC
>Mature Secondary Structure
MKKIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPSQLDAREWV
CCCCCCCCCCCCCCEEEHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RVLKETGFKKLILVVKHHDGFVLYPTAHTDYSVKVSPWRRGKGDLLLEVSQAATEFDMDM
HHHHHCCCEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCEEEEEHHHHHHCCCCC
GVYLSPWDAHSPLYHVDREADYNAYYLAQLKEILSNPNYGNAGKFAEVWMDGARGEGAQK
CCEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
VNYEFEKWFETIRDLQGDCLIFSTEGTSIRWIGNERGYAGDPLWQKVNLDKLGTEAELNY
CCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEECCHHHCCCHHHHHH
LQHGDPSGTIFSIGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQ
HHCCCCCCCEEEECCCCEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
AGLFDAKDIERLYEFATYRNELYKEDLALGAEVSGPALSADFDCRHLTDGLETSSWASDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
DLPIQLELDLGSPKTFDVIELREDLKLGQRIAAFHVQVEVDGVWQEFGRGFTVGHKRLLR
CCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEEEEECHHHHHHCCCEEHHHHHHHH
GPLVEAQKVRVMITEAQSIPVLTKISLYKTPGLSKKEVVQELAFAEKSLAVAKGETLHFR
CCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEECCCEEEEE
IERSESSSSLEAKISIQPGTGVHGVAYQDEIYALAFQAGETEKRLTLPTLYFAGDKTLDF
EECCCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCEEEE
YLNLTVDGQLVDQLQVQVS
EEEEEECCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha-L-fucoside

Specific reaction: H2O + an alpha-L-fucoside = L-fucose + an alcohol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA