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The map label for this gene is hsdS [C]

Identifier: 116516954

GI number: 116516954

Start: 459401

End: 460000

Strand: Reverse

Name: hsdS [C]

Synonym: SPD_0450

Alternate gene names: 116516954

Gene position: 460000-459401 (Counterclockwise)

Preceding gene: 116515761

Following gene: 116515598

Centisome position: 22.48

GC content: 30.67

Gene sequence:

>600_bases
GTGGTCAAACTGACTACCTGCTATTTTTGTGATTATGGCTCTTATTATGGGAATATACCTATGAATTGGGTTGTTATAAA
AATAAAAGATATTTTTTCAATGAATACAGGTCTTTCTTACAAGAAGGGCGATTTAAGCATTAATAATAAAGGTGTTAGAA
TTATACGTGGTGGTAATATTAAGCCTTTAGAATTTTCTCTGTTGGATAATGATTACTACATTGATACACAATTCATCTCC
TCTGAGCAAGTTTATTTAAAACATAATCAGCTAATAACACCTGTAGCAACCTCTTTAGAACATATTGGAAAGTTTGCAAG
AATCGATAAAGACTATGATGGTGTTGTGGCTGGTGGATTTATTTTCCAATTAACACCATTCGAAAGTTCAGAGATTATTT
CAAAATTTCTATTATTTAACTTGTCCTCTCCGTTATTTTATAAACAATTGAAAGCAATAACTAAACTATCAGGTCAAGCT
TTATATAATATTCCTAAAACTACACTGAGCGAGCTATTAATTCCGTTAGCTCCTTTTGAGGAACAGGAACTTATTACTCA
AAAAGTTGAGAAACTTTTTGAAAAAGTAAATCAACTTTGA

Upstream 100 bases:

>100_bases
GGACACGAAAGTATAGAAACTACTCGAATTTATCTAAGGAAAACAGCTACTGAACAACAAAATATTGTAGATAAAATTGT
TAATTGGTAAAAAATAACAG

Downstream 100 bases:

>100_bases
AAATGATTCTTTTCATCTCTTCATGATTAGAAATAGGGATTAATAATTCGGAGATACTGGTACTATTTAATGTTTTCCCT
TTGATAGCATCTTTTGAATC

Product: type I restriction-modification system, S subunit

Products: NA

Alternate protein names: Type I Restriction- System; Type I Restriction- System S Subunit; Type I Restriction Ecocificity Protein; Type I Restriction EcoKI Specificity Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MVKLTTCYFCDYGSYYGNIPMNWVVIKIKDIFSMNTGLSYKKGDLSINNKGVRIIRGGNIKPLEFSLLDNDYYIDTQFIS
SEQVYLKHNQLITPVATSLEHIGKFARIDKDYDGVVAGGFIFQLTPFESSEIISKFLLFNLSSPLFYKQLKAITKLSGQA
LYNIPKTTLSELLIPLAPFEEQELITQKVEKLFEKVNQL

Sequences:

>Translated_199_residues
MVKLTTCYFCDYGSYYGNIPMNWVVIKIKDIFSMNTGLSYKKGDLSINNKGVRIIRGGNIKPLEFSLLDNDYYIDTQFIS
SEQVYLKHNQLITPVATSLEHIGKFARIDKDYDGVVAGGFIFQLTPFESSEIISKFLLFNLSSPLFYKQLKAITKLSGQA
LYNIPKTTLSELLIPLAPFEEQELITQKVEKLFEKVNQL
>Mature_199_residues
MVKLTTCYFCDYGSYYGNIPMNWVVIKIKDIFSMNTGLSYKKGDLSINNKGVRIIRGGNIKPLEFSLLDNDYYIDTQFIS
SEQVYLKHNQLITPVATSLEHIGKFARIDKDYDGVVAGGFIFQLTPFESSEIISKFLLFNLSSPLFYKQLKAITKLSGQA
LYNIPKTTLSELLIPLAPFEEQELITQKVEKLFEKVNQL

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22704; Mature: 22704

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLTTCYFCDYGSYYGNIPMNWVVIKIKDIFSMNTGLSYKKGDLSINNKGVRIIRGGNI
CEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCEECCCEEECCCCEEEEECCCC
KPLEFSLLDNDYYIDTQFISSEQVYLKHNQLITPVATSLEHIGKFARIDKDYDGVVAGGF
CEEEEEEECCCEEEEEEEECCCEEEEECCCEECHHHHHHHHHHHHHHCCCCCCCEEECCE
IFQLTPFESSEIISKFLLFNLSSPLFYKQLKAITKLSGQALYNIPKTTLSELLIPLAPFE
EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCC
EQELITQKVEKLFEKVNQL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKLTTCYFCDYGSYYGNIPMNWVVIKIKDIFSMNTGLSYKKGDLSINNKGVRIIRGGNI
CEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCEECCCEEECCCCEEEEECCCC
KPLEFSLLDNDYYIDTQFISSEQVYLKHNQLITPVATSLEHIGKFARIDKDYDGVVAGGF
CEEEEEEECCCEEEEEEEECCCEEEEECCCEECHHHHHHHHHHHHHHCCCCCCCEEECCE
IFQLTPFESSEIISKFLLFNLSSPLFYKQLKAITKLSGQALYNIPKTTLSELLIPLAPFE
EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCC
EQELITQKVEKLFEKVNQL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA