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The map label for this gene is ytmP [H]

Identifier: 116516934

GI number: 116516934

Start: 485608

End: 486402

Strand: Direct

Name: ytmP [H]

Synonym: SPD_0476

Alternate gene names: 116516934

Gene position: 485608-486402 (Clockwise)

Preceding gene: 116515839

Following gene: 116515622

Centisome position: 23.73

GC content: 41.38

Gene sequence:

>795_bases
ATGGATTTGGGTGATAATGAGCTAACACTGACTCCCATACCTGGGAAAAGTGGCAAGGCTTATATGGGTAGCTATCCTGA
TGGGAAGCGCATCTTTGTAAAAATGAACACCTCTCCAATCCTACCTGGTCTAGCTAGAGAACAAATTGCTCCACAATTAT
TATGGAGTCGTCGTTTGGCAGATGGGCGTGATATGTGTGCTCAAGAATGGTTGACAGGCAAGATATTGACCCCCTATGAT
ATGAATCGTAAGCAAATCGTCAATATTTTAACCCGTCTTCATCGCTCACGTCCGTTGATGACACAATTGAGTCGTTTGGG
CTATGCCATGGAAACACCTGTAGATTTACTACAGTCTTGGCAAGAAACGGCTCCAGATGCTTTGCGTAAAAATCATTTTA
TCAGTGAAGTGATGGCTGATTTGCGTCAGACTATTCCAGGATTTAGAGAGGACCATGCGACCATTGTCCATGGAGATGTA
CGACATAGTAATTGGATTGAGACAGATAGTGGCTTGATTTATTTAGTAGATTGGGATTCGGTTCGCTTGACCGATCGCAT
GTTTGATGTGGCCCATATGCTCTGCCATTATATTTCAGAACATCAGTGGAAGGAATGGTTGACCTACTACGGTTACAAGT
ACAATCAAACGGTATTAAGTAAATTGTATTGGTATGGTCAATTGTCTTATTTGAGTCAGATTTCCAAGTATTATATGAAC
CAAGATTTAGAAAATGTCAATCGGGAGATTCATGGTTTGCGTCATTTCCGAGACAAGTATGGAAAGAGAAGATGA

Upstream 100 bases:

>100_bases
AGCCAATCCAGAGGCTTTTCTTTGAGAATCGGGTTAGAGTGGTTGACGAATAGGCCAAAAACTAGTAGAATAGTAAGGAA
ACTTTATACGGAGGAAAGAA

Downstream 100 bases:

>100_bases
GAGTTAGAAATCGTAAAGGGGCAACAGAATTACTAGAGGCAAATCCCCAGTATGTGGTCCTCAATCCCTTGGAAGCCAAG
GCAAAATGGCGGGACTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MDLGDNELTLTPIPGKSGKAYMGSYPDGKRIFVKMNTSPILPGLAREQIAPQLLWSRRLADGRDMCAQEWLTGKILTPYD
MNRKQIVNILTRLHRSRPLMTQLSRLGYAMETPVDLLQSWQETAPDALRKNHFISEVMADLRQTIPGFREDHATIVHGDV
RHSNWIETDSGLIYLVDWDSVRLTDRMFDVAHMLCHYISEHQWKEWLTYYGYKYNQTVLSKLYWYGQLSYLSQISKYYMN
QDLENVNREIHGLRHFRDKYGKRR

Sequences:

>Translated_264_residues
MDLGDNELTLTPIPGKSGKAYMGSYPDGKRIFVKMNTSPILPGLAREQIAPQLLWSRRLADGRDMCAQEWLTGKILTPYD
MNRKQIVNILTRLHRSRPLMTQLSRLGYAMETPVDLLQSWQETAPDALRKNHFISEVMADLRQTIPGFREDHATIVHGDV
RHSNWIETDSGLIYLVDWDSVRLTDRMFDVAHMLCHYISEHQWKEWLTYYGYKYNQTVLSKLYWYGQLSYLSQISKYYMN
QDLENVNREIHGLRHFRDKYGKRR
>Mature_264_residues
MDLGDNELTLTPIPGKSGKAYMGSYPDGKRIFVKMNTSPILPGLAREQIAPQLLWSRRLADGRDMCAQEWLTGKILTPYD
MNRKQIVNILTRLHRSRPLMTQLSRLGYAMETPVDLLQSWQETAPDALRKNHFISEVMADLRQTIPGFREDHATIVHGDV
RHSNWIETDSGLIYLVDWDSVRLTDRMFDVAHMLCHYISEHQWKEWLTYYGYKYNQTVLSKLYWYGQLSYLSQISKYYMN
QDLENVNREIHGLRHFRDKYGKRR

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 31105; Mature: 31105

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGDNELTLTPIPGKSGKAYMGSYPDGKRIFVKMNTSPILPGLAREQIAPQLLWSRRLA
CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
DGRDMCAQEWLTGKILTPYDMNRKQIVNILTRLHRSRPLMTQLSRLGYAMETPVDLLQSW
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCHHHHHHH
QETAPDALRKNHFISEVMADLRQTIPGFREDHATIVHGDVRHSNWIETDSGLIYLVDWDS
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEECCC
VRLTDRMFDVAHMLCHYISEHQWKEWLTYYGYKYNQTVLSKLYWYGQLSYLSQISKYYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
QDLENVNREIHGLRHFRDKYGKRR
CCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLGDNELTLTPIPGKSGKAYMGSYPDGKRIFVKMNTSPILPGLAREQIAPQLLWSRRLA
CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
DGRDMCAQEWLTGKILTPYDMNRKQIVNILTRLHRSRPLMTQLSRLGYAMETPVDLLQSW
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCHHHHHHH
QETAPDALRKNHFISEVMADLRQTIPGFREDHATIVHGDVRHSNWIETDSGLIYLVDWDS
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEECCC
VRLTDRMFDVAHMLCHYISEHQWKEWLTYYGYKYNQTVLSKLYWYGQLSYLSQISKYYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
QDLENVNREIHGLRHFRDKYGKRR
CCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]