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The map label for this gene is yybT [H]

Identifier: 116516911

GI number: 116516911

Start: 2010060

End: 2012033

Strand: Reverse

Name: yybT [H]

Synonym: SPD_2032

Alternate gene names: 116516911

Gene position: 2012033-2010060 (Counterclockwise)

Preceding gene: 116516918

Following gene: 116515335

Centisome position: 98.33

GC content: 37.89

Gene sequence:

>1974_bases
ATGAAAAAATTTTATGTAAGTCCAATTTTTCCTATTCTAGTAGGATTGATTGCGTTTGGAGTCTTATCCACTTTCATTAT
TTTTGTTAATAATAATCTGTTGACGGTTTTAATTTTGTTTCTTTTTGTAGGAGGCTATGTTTTTTTATTTAAGAAACTGA
GAGTGCATTATACAAGGAGTGATGTAGAACAGATACAGTATGTAAACCACCAAGCGGAAGAAAGTTTGACAGCTCTATTG
GAACAGATGCCTGTAGGTGTTATGAAATTGAATTTATCTTCTGGAGAGGTTGAGTGGTTTAATCCCTATGCTGAATTGAT
TTTGACCAAGGAAGATGGTGATTTTGATTTAGAAGCTGTTCAAACGATTATCAAGGCTTCAGTAGGAAATCCGTCTACTT
ATGCCAAGCTTGGTGAGAAGCGTTATGCTGTTCATATGGATGCTTCTTCCGGTGTTTTGTATTTTGTAGATGTATCCAGG
GAACAAGCCATAACAGATGAATTGGTAACAAGTCGACCAGTGATTGGGATTGTCTCTGTGGATAATTATGATGATTTGGA
GGATGCAACTTCTGAGTCAGATATTAGTCAAATCAATAGTTTTGTAGCTAATTTTATATCAGAGTTTTCAGAAAAATACA
TGATGTTTTCTCGTCGGGTAAGTATGGATCGATTTTATCTATTTACTGACTACACGGTGCTTGAGGGCTTGATGAATGAT
AAATTTTCTGTTATTGATGCTTTCAGAGAAGAGTCGAAACAGAGACAGTTGCCCTTGACTTTAAGTATGGGATTTTCTTA
TGGCGATGGAAATCATGATGAGATAGGGAAAGTTGCTTTGCTCAATTTGAACTTGGCTGAAGTACGTGGTGGCGACCAGG
TGGTTGTTAAGGAAAACGACGAAACGAAAAATCCAGTTTATTTTGGTGGTGGGTCTGCTGCTTCAATCAAGCGTACACGG
ACTCGTACGCGCGCTATGATGACAGCTATTTCAGATAAGATTCGGAGTGTAGATCAGGTTTTTGTAGTCGGTCACAAAAA
TTTAGACATGGATGCTTTGGGCTCTGCTGTAGGTATGCAGTTGTTCGCCAGCAATGTGATTGAAAATAGCTATGCTCTTT
ATGATGAAGAACAAATGTCTCCAGATATTGAACGAGCTGTTTCATTCATAGAAAAAGAAGGAGTTACGAAGTTGTTGTCT
GTTAAGGATGCAATGGGGATGGTGACCAATCGTTCTTTGTTGATTCTTGTAGACCATTCAAAGACAGCCTTAACATTATC
AAAAGAATTTTATGATTTATTTACCCAAACCATTGTTATTGACCACCATAGAAGGGATCAGGATTTTCCAGATAATGCAG
TCATTACTTATATCGAAAGTGGTGCAAGTAGTGCCAGTGAGTTGGTAACGGAATTGATTCAGTTCCAGAATTCTAAGAAA
AATCGTTTGAGTCGTATGCAAGCAAGTGTTTTGATGGCTGGTATGATGTTGGATACTAAAAATTTCACCTCGCGAGTAAC
TAGTCGGACATTTGATGTTGCTAGCTATCTCAGAACGCGCGGAAGTGATAGTATTGCTATCCAGGAAATTGCTGCGACAG
ATTTTGAAGAATATCGTGAGGTTAATGAACTTATTTTACAGGGGTGTAAATTAGGTTCAGATGTACTAATAGCAGAGGCT
AAGGACACGAAATGCTATGATACAGTTGTTATTAGTAAGGCAGCAGATGCCATGTTAGCCATGTCAGGTATTGAAGCGAG
TTTTGTTCTTGCGAAGAATACACAAGGATTTATCTCTATCTCAGCTCGAAGTCGTAGTAAACTGAATGTACAACGGATTA
TGGAAGAGTTAGGCGGTGGAGGCCACTTTAATTTGGCAGCAGCTCAAATTAAAGATGTAACCTTGTCAGAAGCAGGTGAA
AAACTGACAGAAATTGTATTAAATGAAATAAAGGAAAAGGAGAAAGAAGAATGA

Upstream 100 bases:

>100_bases
AAACTACCTTTTTCTTATAATTGATAGAATTACTGATTACACTTTTAAAAAGTCGCTTTTTGAGGGGTATTATGGTATAA
TGGGTGCCAAGAGGTTTTGA

Downstream 100 bases:

>100_bases
AAGTAATCTTTTTAGCAGATGTTAAAGGAAAAGGTAAAAAAGGCGAAATTAAGGAAGTACCAACAGGGTATGCGCAAAAC
TTTCTTATCAAAAAGAATCT

Product: DHH subfamily 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MKKFYVSPIFPILVGLIAFGVLSTFIIFVNNNLLTVLILFLFVGGYVFLFKKLRVHYTRSDVEQIQYVNHQAEESLTALL
EQMPVGVMKLNLSSGEVEWFNPYAELILTKEDGDFDLEAVQTIIKASVGNPSTYAKLGEKRYAVHMDASSGVLYFVDVSR
EQAITDELVTSRPVIGIVSVDNYDDLEDATSESDISQINSFVANFISEFSEKYMMFSRRVSMDRFYLFTDYTVLEGLMND
KFSVIDAFREESKQRQLPLTLSMGFSYGDGNHDEIGKVALLNLNLAEVRGGDQVVVKENDETKNPVYFGGGSAASIKRTR
TRTRAMMTAISDKIRSVDQVFVVGHKNLDMDALGSAVGMQLFASNVIENSYALYDEEQMSPDIERAVSFIEKEGVTKLLS
VKDAMGMVTNRSLLILVDHSKTALTLSKEFYDLFTQTIVIDHHRRDQDFPDNAVITYIESGASSASELVTELIQFQNSKK
NRLSRMQASVLMAGMMLDTKNFTSRVTSRTFDVASYLRTRGSDSIAIQEIAATDFEEYREVNELILQGCKLGSDVLIAEA
KDTKCYDTVVISKAADAMLAMSGIEASFVLAKNTQGFISISARSRSKLNVQRIMEELGGGGHFNLAAAQIKDVTLSEAGE
KLTEIVLNEIKEKEKEE

Sequences:

>Translated_657_residues
MKKFYVSPIFPILVGLIAFGVLSTFIIFVNNNLLTVLILFLFVGGYVFLFKKLRVHYTRSDVEQIQYVNHQAEESLTALL
EQMPVGVMKLNLSSGEVEWFNPYAELILTKEDGDFDLEAVQTIIKASVGNPSTYAKLGEKRYAVHMDASSGVLYFVDVSR
EQAITDELVTSRPVIGIVSVDNYDDLEDATSESDISQINSFVANFISEFSEKYMMFSRRVSMDRFYLFTDYTVLEGLMND
KFSVIDAFREESKQRQLPLTLSMGFSYGDGNHDEIGKVALLNLNLAEVRGGDQVVVKENDETKNPVYFGGGSAASIKRTR
TRTRAMMTAISDKIRSVDQVFVVGHKNLDMDALGSAVGMQLFASNVIENSYALYDEEQMSPDIERAVSFIEKEGVTKLLS
VKDAMGMVTNRSLLILVDHSKTALTLSKEFYDLFTQTIVIDHHRRDQDFPDNAVITYIESGASSASELVTELIQFQNSKK
NRLSRMQASVLMAGMMLDTKNFTSRVTSRTFDVASYLRTRGSDSIAIQEIAATDFEEYREVNELILQGCKLGSDVLIAEA
KDTKCYDTVVISKAADAMLAMSGIEASFVLAKNTQGFISISARSRSKLNVQRIMEELGGGGHFNLAAAQIKDVTLSEAGE
KLTEIVLNEIKEKEKEE
>Mature_657_residues
MKKFYVSPIFPILVGLIAFGVLSTFIIFVNNNLLTVLILFLFVGGYVFLFKKLRVHYTRSDVEQIQYVNHQAEESLTALL
EQMPVGVMKLNLSSGEVEWFNPYAELILTKEDGDFDLEAVQTIIKASVGNPSTYAKLGEKRYAVHMDASSGVLYFVDVSR
EQAITDELVTSRPVIGIVSVDNYDDLEDATSESDISQINSFVANFISEFSEKYMMFSRRVSMDRFYLFTDYTVLEGLMND
KFSVIDAFREESKQRQLPLTLSMGFSYGDGNHDEIGKVALLNLNLAEVRGGDQVVVKENDETKNPVYFGGGSAASIKRTR
TRTRAMMTAISDKIRSVDQVFVVGHKNLDMDALGSAVGMQLFASNVIENSYALYDEEQMSPDIERAVSFIEKEGVTKLLS
VKDAMGMVTNRSLLILVDHSKTALTLSKEFYDLFTQTIVIDHHRRDQDFPDNAVITYIESGASSASELVTELIQFQNSKK
NRLSRMQASVLMAGMMLDTKNFTSRVTSRTFDVASYLRTRGSDSIAIQEIAATDFEEYREVNELILQGCKLGSDVLIAEA
KDTKCYDTVVISKAADAMLAMSGIEASFVLAKNTQGFISISARSRSKLNVQRIMEELGGGGHFNLAAAQIKDVTLSEAGE
KLTEIVLNEIKEKEKEE

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 73275; Mature: 73275

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFYVSPIFPILVGLIAFGVLSTFIIFVNNNLLTVLILFLFVGGYVFLFKKLRVHYTRS
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVEQIQYVNHQAEESLTALLEQMPVGVMKLNLSSGEVEWFNPYAELILTKEDGDFDLEAV
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHEEEEECCCCCCCHHHH
QTIIKASVGNPSTYAKLGEKRYAVHMDASSGVLYFVDVSREQAITDELVTSRPVIGIVSV
HHHHHHCCCCCHHHHHHCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEE
DNYDDLEDATSESDISQINSFVANFISEFSEKYMMFSRRVSMDRFYLFTDYTVLEGLMND
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCC
KFSVIDAFREESKQRQLPLTLSMGFSYGDGNHDEIGKVALLNLNLAEVRGGDQVVVKEND
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEECCC
ETKNPVYFGGGSAASIKRTRTRTRAMMTAISDKIRSVDQVFVVGHKNLDMDALGSAVGMQ
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHH
LFASNVIENSYALYDEEQMSPDIERAVSFIEKEGVTKLLSVKDAMGMVTNRSLLILVDHS
HHHHHHHHCCCEECCHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEEECC
KTALTLSKEFYDLFTQTIVIDHHRRDQDFPDNAVITYIESGASSASELVTELIQFQNSKK
CCEEEHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHH
NRLSRMQASVLMAGMMLDTKNFTSRVTSRTFDVASYLRTRGSDSIAIQEIAATDFEEYRE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCHHHHHH
VNELILQGCKLGSDVLIAEAKDTKCYDTVVISKAADAMLAMSGIEASFVLAKNTQGFISI
HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE
SARSRSKLNVQRIMEELGGGGHFNLAAAQIKDVTLSEAGEKLTEIVLNEIKEKEKEE
ECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFYVSPIFPILVGLIAFGVLSTFIIFVNNNLLTVLILFLFVGGYVFLFKKLRVHYTRS
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVEQIQYVNHQAEESLTALLEQMPVGVMKLNLSSGEVEWFNPYAELILTKEDGDFDLEAV
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHEEEEECCCCCCCHHHH
QTIIKASVGNPSTYAKLGEKRYAVHMDASSGVLYFVDVSREQAITDELVTSRPVIGIVSV
HHHHHHCCCCCHHHHHHCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEE
DNYDDLEDATSESDISQINSFVANFISEFSEKYMMFSRRVSMDRFYLFTDYTVLEGLMND
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCC
KFSVIDAFREESKQRQLPLTLSMGFSYGDGNHDEIGKVALLNLNLAEVRGGDQVVVKEND
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEECCC
ETKNPVYFGGGSAASIKRTRTRTRAMMTAISDKIRSVDQVFVVGHKNLDMDALGSAVGMQ
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHH
LFASNVIENSYALYDEEQMSPDIERAVSFIEKEGVTKLLSVKDAMGMVTNRSLLILVDHS
HHHHHHHHCCCEECCHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEEECC
KTALTLSKEFYDLFTQTIVIDHHRRDQDFPDNAVITYIESGASSASELVTELIQFQNSKK
CCEEEHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHH
NRLSRMQASVLMAGMMLDTKNFTSRVTSRTFDVASYLRTRGSDSIAIQEIAATDFEEYRE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCHHHHHH
VNELILQGCKLGSDVLIAEAKDTKCYDTVVISKAADAMLAMSGIEASFVLAKNTQGFISI
HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE
SARSRSKLNVQRIMEELGGGGHFNLAAAQIKDVTLSEAGEKLTEIVLNEIKEKEKEE
ECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]