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The map label for this gene is 116516906

Identifier: 116516906

GI number: 116516906

Start: 567933

End: 568718

Strand: Direct

Name: 116516906

Synonym: SPD_0556

Alternate gene names: NA

Gene position: 567933-568718 (Clockwise)

Preceding gene: 116516264

Following gene: 116516972

Centisome position: 27.76

GC content: 39.44

Gene sequence:

>786_bases
ATGAAAAAATATCAACGAATGCATCTGATTTTTATCAGACAATACATCAAACAAATCATGGAATATAAGGTGGATTTTGT
GGTTGGTGTCTTGGGAGTCTTTCTGGCTCAAGGCTTGAATCTCTTGTTTCTCAATGTCATCTTTCAACATATTCCATTCC
TAGAAGGCTGGACCTTTCAAGAGATAGCTTTCATTTATGGATTTTCCTTGATTCCCAAGGGAATGGACCATCTCTTTTTT
GACAATCTCTGGGCACTAGGGCAACGCCTAGTCCGAAAAGGGGAGTTTGACAAGTATTTGACTCGTCCCATCAATCCTCT
CTTTCACATCCTAGTTGAAACCTTTCAGATTGATGCCTTGGGTGAACTCTTAGTCGGTGGTATTTTATTGGGAACAACAG
TGACCAGCATTGTTTGGACTCTTCCAAAATTCCTGCTTTTCCTAGTTTGTATTCCTTTTGCGACCTTGATTTATACTTCT
CTTAAAATCGCAACAGCCAGTATCGCCTTTTGGACTAAGCAGTCAGGCGCCATGATTTACATCTTCTATATGTTCAATGA
CTTTGCTAAGTATCCGATTTCTATTTACAATTCTCTTCTTCGTTGGTTGATTAGCTTTATCGTGCCTTTCGCCTTTACAG
CCTACTATCCAGCTAGCTATTTCTTACAGGAAAAGGATGTGTTCTTTAACGTAGGAGGTTTGATGTTGATTTCTCTGGTT
TTCTTTGTTATTTCCCTTAAACTTTGGGATAAGGGCTTAGATTCCTACGAAAGTGCGGGTTCGTAA

Upstream 100 bases:

>100_bases
GCACTCCTTTTGCAGTTCTTCTGGCTCTTAGTGATGGTGGGATTGTCTCAGTTGATTTGGAAACGGGTCCAGTCCTTTAT
CACCATTCAAGGAGGTTAGT

Downstream 100 bases:

>100_bases
AAGCTAAAGTAAGACTAAAATCAAGAAAGGAACTTATGATGTTTGTAATTGAAGAAGTCAAGGATGAAAATCAAAAAAGG
CAGTTGTCGCTGAGGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Transporter; ABC-Type Transport System Permease Component; ABC Transporter Transmembrane Subunit; Permease Component; ABC Transporter; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKKYQRMHLIFIRQYIKQIMEYKVDFVVGVLGVFLAQGLNLLFLNVIFQHIPFLEGWTFQEIAFIYGFSLIPKGMDHLFF
DNLWALGQRLVRKGEFDKYLTRPINPLFHILVETFQIDALGELLVGGILLGTTVTSIVWTLPKFLLFLVCIPFATLIYTS
LKIATASIAFWTKQSGAMIYIFYMFNDFAKYPISIYNSLLRWLISFIVPFAFTAYYPASYFLQEKDVFFNVGGLMLISLV
FFVISLKLWDKGLDSYESAGS

Sequences:

>Translated_261_residues
MKKYQRMHLIFIRQYIKQIMEYKVDFVVGVLGVFLAQGLNLLFLNVIFQHIPFLEGWTFQEIAFIYGFSLIPKGMDHLFF
DNLWALGQRLVRKGEFDKYLTRPINPLFHILVETFQIDALGELLVGGILLGTTVTSIVWTLPKFLLFLVCIPFATLIYTS
LKIATASIAFWTKQSGAMIYIFYMFNDFAKYPISIYNSLLRWLISFIVPFAFTAYYPASYFLQEKDVFFNVGGLMLISLV
FFVISLKLWDKGLDSYESAGS
>Mature_261_residues
MKKYQRMHLIFIRQYIKQIMEYKVDFVVGVLGVFLAQGLNLLFLNVIFQHIPFLEGWTFQEIAFIYGFSLIPKGMDHLFF
DNLWALGQRLVRKGEFDKYLTRPINPLFHILVETFQIDALGELLVGGILLGTTVTSIVWTLPKFLLFLVCIPFATLIYTS
LKIATASIAFWTKQSGAMIYIFYMFNDFAKYPISIYNSLLRWLISFIVPFAFTAYYPASYFLQEKDVFFNVGGLMLISLV
FFVISLKLWDKGLDSYESAGS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30224; Mature: 30224

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA