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The map label for this gene is pvaA [H]

Identifier: 116516801

GI number: 116516801

Start: 923054

End: 923668

Strand: Direct

Name: pvaA [H]

Synonym: SPD_0912

Alternate gene names: 116516801

Gene position: 923054-923668 (Clockwise)

Preceding gene: 116516178

Following gene: 116516896

Centisome position: 45.11

GC content: 41.63

Gene sequence:

>615_bases
ATGTTTAAACGAATTCGAAGAGTGCTTGTACTAGCAGTCTTCCTTTTTGCTGGCTATAAAGCTTACCGCGTTCATCAAGA
TGTCAAACAAGTCATGACCTATCAACCCATGGTGCGAGAAATGTTGAGTGAAAAAGACACCCCAGCAAACGAAGAGCTTG
TGCTTGCTATGATTTATACTGAAACAAAAGGAAAAGAAGGCGATGTTATGCAGTCTAGTGAGTCTGCAAGTGGTTCCACC
AACACCATCAATGATAATGCCTCTAGCATTCGGCAAGGCATTCAAACTCTGACAGGCAATCTCTATCTGGCGCAGAAGAA
GGGTGTAGATATCTGGACAGCTGTTCAAGCCTATAATTTTGGACCTGCCTATATCGATTTTATCGCCCAAAATGGCAAGG
AAAATACCTTGGCTCTAGCCAAACAGTACTCTCGTGAGACTGTTGCCCCCTTGCTTGGTAATAGGACTGGAAAGACTTAT
AGTTATATTCACCCCATTTCCATTTTTCACGGTGCTGAACTCTATGTAAATGGAGGAAACTATTATTATTCTAGACAGGT
ACGACTTAACCTTTACATCATCAAATGTTTCACTCTCTTTTCAACATCTGGCTAG

Upstream 100 bases:

>100_bases
ATAACGTCTATCAAGACGCCGAGTCTGTTGAGTTTATCCAAAACGAAAATGGAACCTACTCTATCTTAATCAAAAATATC
GAGGATATCCAAAGTAAATA

Downstream 100 bases:

>100_bases
ACCAGGTGTTTTTGTTATAAGTTTTCTTTAAGATAGATATATTACTCTAAAGAAGTAAAGGAGGAAATTCCCTATGAGAA
AGAAACTCTTTCTGACTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREMLSEKDTPANEELVLAMIYTETKGKEGDVMQSSESASGST
NTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNFGPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNRTGKTY
SYIHPISIFHGAELYVNGGNYYYSRQVRLNLYIIKCFTLFSTSG

Sequences:

>Translated_204_residues
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREMLSEKDTPANEELVLAMIYTETKGKEGDVMQSSESASGST
NTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNFGPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNRTGKTY
SYIHPISIFHGAELYVNGGNYYYSRQVRLNLYIIKCFTLFSTSG
>Mature_204_residues
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREMLSEKDTPANEELVLAMIYTETKGKEGDVMQSSESASGST
NTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNFGPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNRTGKTY
SYIHPISIFHGAELYVNGGNYYYSRQVRLNLYIIKCFTLFSTSG

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell surface (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22989; Mature: 22989

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREMLSEKDTPANEELVLAMIYT
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
ETKGKEGDVMQSSESASGSTNTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHCCC
GPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNRTGKTYSYIHPISIFHGAELYVNGGN
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCEEEEECCC
YYYSRQVRLNLYIIKCFTLFSTSG
EEEEEEEEEEEEEEEEEEHHCCCC
>Mature Secondary Structure
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREMLSEKDTPANEELVLAMIYT
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
ETKGKEGDVMQSSESASGSTNTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHCCC
GPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNRTGKTYSYIHPISIFHGAELYVNGGN
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCEEEEECCC
YYYSRQVRLNLYIIKCFTLFSTSG
EEEEEEEEEEEEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11179332; 11463916 [H]