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The map label for this gene is pepS [H]

Identifier: 116516652

GI number: 116516652

Start: 256297

End: 257538

Strand: Direct

Name: pepS [H]

Synonym: SPD_0258

Alternate gene names: 116516652

Gene position: 256297-257538 (Clockwise)

Preceding gene: 116516451

Following gene: 116516350

Centisome position: 12.53

GC content: 46.62

Gene sequence:

>1242_bases
ATGGTTTTACCAAATTTTAAAGAAAATCTAGAAAAATATGCGAAATTGTTGGTTGCGAACGGAATTAACGTGCAACCTGG
TCACACTTTGGCTCTCTCTATTGATGTGGAGCAACGTGAATTGGCACATCTAATCGTGAAAGAAGCTTATGCCTTGGGTG
CGCATGAGGTCATCGTTCAGTGGACAGATGATGTGATTAACCGTGAGAAATTCCTCCATGCCCCGATGGAGCGTTTGGAC
AATGTGCCAGAATACAAGATTGCTGAGATGAACTATCTCTTGGAGAACAAGGCTAGCCGTCTTGGAGTTCGTTCATCTGA
TCCAGGTGCCTTGAACGGAGTGGACGCTGACAAGCTTTCAGCTTCTGCTAAAGCTATGGGACTTGCCATGAAGCCAATGC
GAATCGCAACTCAATCTAACAAGGTTAGCTGGACTGTAGCAGCCGCTGCTGGACTTGAGTGGGCTAAGAAAGTCTTCCCA
AATGCTGCGAGCGACGAAGAAGCAGTCGATCTCCTTTGGGACCAAATCTTCAAAACTTGCCGTGTCTACGAAGCAGATCC
TGTTAAGGCCTGGGAAGAGCATGCAGCCATTCTCAAGAGCAAGGCCGATATGCTTAATAAGGAGCAATTTTCAGCCCTTC
ACTACACAGCGCCAGGAACAGATTTAACACTTGGTTTGCCAAAGAACCACGTTTGGGAATCAGCTGGTGCTGTCAATGCA
CAGGGCGAAGGATTCTTGCCAAATATGCCGACAGAAGAGGTCTTCACAGCGCCTGACTTCCGTCGTGCAGATGGTTATGT
CACTTCTACAAAACCGCTTAGCTACAACGGAAATATCATTGAAGGCATTAAGGTGATCTTTAAGGATGGACAAATCGTAG
ATATCACTGCTGAGAAGGGTGATCAGGTTATGAAAGACCTTGTCTTTGAAAATGCGGGTGCGCGTGCCTTGGGTGAATGT
GCCTTGGTACCAGATCCAAGTCCAATTTCTCAGTCAGGCATTACCTTCTTTAACACCCTTTTCGATGAAAATGCGTCAAA
CCACTTGGCTATCGGTGCAGCCTATGCGACTAGCCTTGTTGATGGAGCGGAGATGAGCGAAGAGGAGCTTGAAGCTGCAG
GGCTTAACCGTTCAGATGTTCACGTAGACTTTATGATTGGTTCTAACCAAATGGATATCGATGGTATTCGTGAGGATGGA
ACGCGGGTACCTCTTTTCCGTAATGGGAATTGGGCAAATTAA

Upstream 100 bases:

>100_bases
TACAATTCTTCTATCGACAGCACTCTTGTCAGGTGCTATTGCTTTAGCAGGAATCTTTTCTGCTTTGAAAGAAAAATAAA
AATAGAAAAGAGAAAACAGG

Downstream 100 bases:

>100_bases
GGAGATAATATGTTAGGAAGTATGTTCGTTGGTCTCCTAGTGGGATTTTTAGCAGGTGCTATGACCAATCGTGGAGAGCG
AATGGGATGTTTTGGAAAAA

Product: aminopeptidase PepS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYALGAHEVIVQWTDDVINREKFLHAPMERLD
NVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLSASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFP
NAASDEEAVDLLWDQIFKTCRVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
QGEGFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVIFKDGQIVDITAEKGDQVMKDLVFENAGARALGEC
ALVPDPSPISQSGITFFNTLFDENASNHLAIGAAYATSLVDGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDG
TRVPLFRNGNWAN

Sequences:

>Translated_413_residues
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYALGAHEVIVQWTDDVINREKFLHAPMERLD
NVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLSASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFP
NAASDEEAVDLLWDQIFKTCRVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
QGEGFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVIFKDGQIVDITAEKGDQVMKDLVFENAGARALGEC
ALVPDPSPISQSGITFFNTLFDENASNHLAIGAAYATSLVDGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDG
TRVPLFRNGNWAN
>Mature_413_residues
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYALGAHEVIVQWTDDVINREKFLHAPMERLD
NVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLSASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFP
NAASDEEAVDLLWDQIFKTCRVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
QGEGFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVIFKDGQIVDITAEKGDQVMKDLVFENAGARALGEC
ALVPDPSPISQSGITFFNTLFDENASNHLAIGAAYATSLVDGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDG
TRVPLFRNGNWAN

Specific function: Exhibits a high specificity towards peptides possessing arginine or aromatic amino acids at the N-terminus. Could be involved both in bacterial growth by supplying amino acids [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 45162; Mature: 45162

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYALGAHEVIVQ
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCEEEE
WTDDVINREKFLHAPMERLDNVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLS
EHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
ASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFPNAASDEEAVDLLWDQIFKTC
HHHHHHHEEECCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCEEEEECCCCEEEEECCCCHHHHCCCCCCC
QGEGFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVIFKDGQIVDITAEKG
CCCCCCCCCCHHHHCCCCCCHHCCCEEECCCCCCCCCCHHHEEHEEEECCCEEEEECCCH
DQVMKDLVFENAGARALGECALVPDPSPISQSGITFFNTLFDENASNHLAIGAAYATSLV
HHHHHHHHHCCCCCCHHCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHH
DGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDGTRVPLFRNGNWAN
CCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYALGAHEVIVQ
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCEEEE
WTDDVINREKFLHAPMERLDNVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLS
EHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
ASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFPNAASDEEAVDLLWDQIFKTC
HHHHHHHEEECCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCEEEEECCCCEEEEECCCCHHHHCCCCCCC
QGEGFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVIFKDGQIVDITAEKG
CCCCCCCCCCHHHHCCCCCCHHCCCEEECCCCCCCCCCHHHEEHEEEECCCEEEEECCCH
DQVMKDLVFENAGARALGECALVPDPSPISQSGITFFNTLFDENASNHLAIGAAYATSLV
HHHHHHHHHCCCCCCHHCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHH
DGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDGTRVPLFRNGNWAN
CCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10406960 [H]