| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516641
Identifier: 116516641
GI number: 116516641
Start: 943679
End: 944455
Strand: Direct
Name: 116516641
Synonym: SPD_0932
Alternate gene names: NA
Gene position: 943679-944455 (Clockwise)
Preceding gene: 116515566
Following gene: 116516404
Centisome position: 46.12
GC content: 26.38
Gene sequence:
>777_bases ATGAGAGGGTTTAATAACAAGATAAAGTCTGTTTATCAAGAACTAACAAATTCCAAAGAGAAATTCGGTAGCTTTCACAA GACTTTAATTCATTTGCATACACCTGTTTCTTATGATTACAAGCTATTTTCTAATTGGACTGCAACGAAATATAGAAAAA TTACTGAAGATGAACTATATGATATATTTTTTGAAAATAAGAAAATAAAAGTTGATAAGACAATTTTTTTTAGTAATTTT GATAAGGTTGTTTTTTCTAGTTCAAAAGAATATATTAGTTTTCTTATGTTAGCAGAGGCAATCATAAAAAATGGAATAGA AATAGTTGTAGTAACTGATCATAATACTACCAAAGGTATTAAAAAGTTACAAATGGCAGTCTCAATCATAATGAAAAATT ATCCGATTTATGATATACATCCTCATATTTTACATGGAGTAGAAATTAGTGCAGCAGATAAATTGCATATTGTATGTATA TATGATTATGAACAAGAATCATGGGTTAATCAATGGTTAAGTGAAAATATTATAAGTGAGAAAGATGGAAGTTATCAACA TTCACTGACTATAATGAAGGATTTCAATAATCAAAAAATAGTTAACTATATTGCTCATTTCAATAGTTATGACATTTTGA AAAAAGGTTCTCACTTATCAGGTGCATATAAACGAAAAATTTTTTCTAAAGAAAATACACGATTTTGGAGTTTAATATTA ACTCGAAAGAATCTTCGCAACAACTTGATATTCTCTATAAAGAAGTTGGTGTATTAA
Upstream 100 bases:
>100_bases GGAGTGGAGTCAGGTAGAGAAGGAGATGTTGCAGGTGGGGGAAAAGAGACTTAATGAATTACTTGAAAAATAAACAATTG ATATTTTTAGGAGAATAGAA
Downstream 100 bases:
>100_bases GTTTGGGACAAAAAGTTGTAGCCATGCTTGATTTTTTATTAGCATATAGTGATTATTCTAAAGACTTCAGACCATTGATT ATTGATCAGCCTGAAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRGFNNKIKSVYQELTNSKEKFGSFHKTLIHLHTPVSYDYKLFSNWTATKYRKITEDELYDIFFENKKIKVDKTIFFSNF DKVVFSSSKEYISFLMLAEAIIKNGIEIVVVTDHNTTKGIKKLQMAVSIIMKNYPIYDIHPHILHGVEISAADKLHIVCI YDYEQESWVNQWLSENIISEKDGSYQHSLTIMKDFNNQKIVNYIAHFNSYDILKKGSHLSGAYKRKIFSKENTRFWSLIL TRKNLRNNLIFSIKKLVY
Sequences:
>Translated_258_residues MRGFNNKIKSVYQELTNSKEKFGSFHKTLIHLHTPVSYDYKLFSNWTATKYRKITEDELYDIFFENKKIKVDKTIFFSNF DKVVFSSSKEYISFLMLAEAIIKNGIEIVVVTDHNTTKGIKKLQMAVSIIMKNYPIYDIHPHILHGVEISAADKLHIVCI YDYEQESWVNQWLSENIISEKDGSYQHSLTIMKDFNNQKIVNYIAHFNSYDILKKGSHLSGAYKRKIFSKENTRFWSLIL TRKNLRNNLIFSIKKLVY >Mature_258_residues MRGFNNKIKSVYQELTNSKEKFGSFHKTLIHLHTPVSYDYKLFSNWTATKYRKITEDELYDIFFENKKIKVDKTIFFSNF DKVVFSSSKEYISFLMLAEAIIKNGIEIVVVTDHNTTKGIKKLQMAVSIIMKNYPIYDIHPHILHGVEISAADKLHIVCI YDYEQESWVNQWLSENIISEKDGSYQHSLTIMKDFNNQKIVNYIAHFNSYDILKKGSHLSGAYKRKIFSKENTRFWSLIL TRKNLRNNLIFSIKKLVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30435; Mature: 30435
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFNNKIKSVYQELTNSKEKFGSFHKTLIHLHTPVSYDYKLFSNWTATKYRKITEDELY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCEECCCCHHHHHCCCHHHHH DIFFENKKIKVDKTIFFSNFDKVVFSSSKEYISFLMLAEAIIKNGIEIVVVTDHNTTKGI HHEECCCEEEEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH KKLQMAVSIIMKNYPIYDIHPHILHGVEISAADKLHIVCIYDYEQESWVNQWLSENIISE HHHHHHHHHHHHCCCEEECCHHHHCCEEEECCCCEEEEEEEECCHHHHHHHHHHHHHCCC KDGSYQHSLTIMKDFNNQKIVNYIAHFNSYDILKKGSHLSGAYKRKIFSKENTRFWSLIL CCCCEEEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEE TRKNLRNNLIFSIKKLVY EHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGFNNKIKSVYQELTNSKEKFGSFHKTLIHLHTPVSYDYKLFSNWTATKYRKITEDELY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCEECCCCHHHHHCCCHHHHH DIFFENKKIKVDKTIFFSNFDKVVFSSSKEYISFLMLAEAIIKNGIEIVVVTDHNTTKGI HHEECCCEEEEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH KKLQMAVSIIMKNYPIYDIHPHILHGVEISAADKLHIVCIYDYEQESWVNQWLSENIISE HHHHHHHHHHHHCCCEEECCHHHHCCEEEECCCCEEEEEEEECCHHHHHHHHHHHHHCCC KDGSYQHSLTIMKDFNNQKIVNYIAHFNSYDILKKGSHLSGAYKRKIFSKENTRFWSLIL CCCCEEEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEE TRKNLRNNLIFSIKKLVY EHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA