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The map label for this gene is 116516627

Identifier: 116516627

GI number: 116516627

Start: 598393

End: 598956

Strand: Direct

Name: 116516627

Synonym: SPD_0576

Alternate gene names: NA

Gene position: 598393-598956 (Clockwise)

Preceding gene: 116515466

Following gene: 116515780

Centisome position: 29.25

GC content: 45.74

Gene sequence:

>564_bases
ATGAACGAGACACAGATTCAAAGAGAAACACGTCAGGTAGTGGAAGATGTTTTAGAAAAGACCAATTTGAAACAGGGGGC
CCTTTTTGTTTTAGGTCTATCTTCTAGTGAGGTGCTAGGTGGTCAGATTGGGAAAGAATCCAGTCAAGAGATTGGTGAGC
TGATAGTGGAGACTATCTTGGGTATTCTAGGTAGTAGAGGTATCCATTTAGCAGTTCAAGGTTGTGAGCATGTCAATCGG
GCTCTCGTTGTTGAACGTCAGGTGGCAGAGCAGTTTGGTCTGGAAATTGTCAGTGTCCATCCTACTCTTCATGCAGGAGG
TTCGGGGCAGTTGGCAGCCTTTAAGTTTATGCAGGATCCAGTTGAGGTTGAATTTATCAAGGCTCATGCTGGATTGGATA
TCGGAGACACTGCAATTGGCATGCATGTCAAGCATGTTCAGGTTCCGATTCGCCCTATTTTGAGAGAGATTGGTCATGCC
CATGTAACGGCACTGACTAGTCGTCCAAAATTAATCGGAGGTGCGCGTGCGCACTATCCGCAAGATGCTATTAGGAAGTT
TTGA

Upstream 100 bases:

>100_bases
GGGAGTTTTATGCGTAATTGGGCAAACTTTCTAGGTTGTCTATCTTGCTAAAAACAAGAAAAAACGGTATGATAGAAGAG
TGACAACAGAGGTAACAGAG

Downstream 100 bases:

>100_bases
GAATGAATAAAGGAGATAAAAGTGTTTAAAAAAGACCGTTTTTCAATTCGTAAGATTAAGGGAGTTGTAGGCTCTGTATT
TCTTGGAAGCCTTTTGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNETQIQRETRQVVEDVLEKTNLKQGALFVLGLSSSEVLGGQIGKESSQEIGELIVETILGILGSRGIHLAVQGCEHVNR
ALVVERQVAEQFGLEIVSVHPTLHAGGSGQLAAFKFMQDPVEVEFIKAHAGLDIGDTAIGMHVKHVQVPIRPILREIGHA
HVTALTSRPKLIGGARAHYPQDAIRKF

Sequences:

>Translated_187_residues
MNETQIQRETRQVVEDVLEKTNLKQGALFVLGLSSSEVLGGQIGKESSQEIGELIVETILGILGSRGIHLAVQGCEHVNR
ALVVERQVAEQFGLEIVSVHPTLHAGGSGQLAAFKFMQDPVEVEFIKAHAGLDIGDTAIGMHVKHVQVPIRPILREIGHA
HVTALTSRPKLIGGARAHYPQDAIRKF
>Mature_187_residues
MNETQIQRETRQVVEDVLEKTNLKQGALFVLGLSSSEVLGGQIGKESSQEIGELIVETILGILGSRGIHLAVQGCEHVNR
ALVVERQVAEQFGLEIVSVHPTLHAGGSGQLAAFKFMQDPVEVEFIKAHAGLDIGDTAIGMHVKHVQVPIRPILREIGHA
HVTALTSRPKLIGGARAHYPQDAIRKF

Specific function: Unknown

COG id: COG4475

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0340 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y576_STRP2 (Q04LM3)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816075.1
- ProteinModelPortal:   Q04LM3
- SMR:   Q04LM3
- STRING:   Q04LM3
- EnsemblBacteria:   EBSTRT00000019869
- GeneID:   4441415
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_0576
- eggNOG:   COG4475
- GeneTree:   EBGT00050000027039
- HOGENOM:   HBG313927
- OMA:   IDIGDTF
- ProtClustDB:   PRK13690
- HAMAP:   MF_00800
- InterPro:   IPR006340
- Gene3D:   G3DSA:3.40.50.10360
- PIRSF:   PIRSF007510
- ProDom:   PD102102
- TIGRFAMs:   TIGR01440

Pfam domain/function: PF04260 DUF436; SSF110710 CHP01440

EC number: NA

Molecular weight: Translated: 20283; Mature: 20283

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETQIQRETRQVVEDVLEKTNLKQGALFVLGLSSSEVLGGQIGKESSQEIGELIVETIL
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHH
GILGSRGIHLAVQGCEHVNRALVVERQVAEQFGLEIVSVHPTLHAGGSGQLAAFKFMQDP
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCHHHHHHHCCC
VEVEFIKAHAGLDIGDTAIGMHVKHVQVPIRPILREIGHAHVTALTSRPKLIGGARAHYP
CCEEEEEECCCCCCCCHHHCEEEEEEECCHHHHHHHCCHHHEEHHCCCCCCCCCCCCCCC
QDAIRKF
HHHHHCC
>Mature Secondary Structure
MNETQIQRETRQVVEDVLEKTNLKQGALFVLGLSSSEVLGGQIGKESSQEIGELIVETIL
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHH
GILGSRGIHLAVQGCEHVNRALVVERQVAEQFGLEIVSVHPTLHAGGSGQLAAFKFMQDP
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCHHHHHHHCCC
VEVEFIKAHAGLDIGDTAIGMHVKHVQVPIRPILREIGHAHVTALTSRPKLIGGARAHYP
CCEEEEEECCCCCCCCHHHCEEEEEEECCHHHHHHHCCHHHEEHHCCCCCCCCCCCCCCC
QDAIRKF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA