| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516530
Identifier: 116516530
GI number: 116516530
Start: 413882
End: 415771
Strand: Direct
Name: 116516530
Synonym: SPD_0414
Alternate gene names: NA
Gene position: 413882-415771 (Clockwise)
Preceding gene: 116515593
Following gene: 116515636
Centisome position: 20.23
GC content: 41.06
Gene sequence:
>1890_bases ATGAAAAAAACTTTTTTCTTACTGGTGTTAGGCTTGTTTTGCCTTCTTCCACTCTCTGTTTTTGCCATTGATTTCAAGAT AAACTCTTATCAAGGGGATTTGTATATTCATGCAGACAATACGGCAGAGTTTAGACAGAAGATAGTTTACCAGTTTGAGG AGGACTTTAAGGGCCAAATCGTGGGACTTGGACGTGCTGGTAAGATGCCTAGCGGGTTTGACATTGACCCTCATCCAAAG ATTCAGGCCGCGAAAAACGGTGCAGAACTAGCAGATGTGACTAGCGAAGTAACAGAAGAAGCGGATGGTTATACTGTGAG AGTCTATAATCCAGGTCAGGAGGGCGACATAGTTGAAGTTGACCTCGTCTGGAACTTAAAAAATTTACTTTTCCTTTATG ATGATATCGCTGAATTAAATTGGCAACCTCTGACAGATAGTTCAGAGTCTATTGAAAAGTTTGAATTTCATGTAAGGGGA GACAAGGGGGCTGAGAAACTCTTTTTCCATACAGGGAAACTTTTTAGAGAGAGAACGGTTGAAAAGAGTAACCTTGATTA TACTATTCGTTTAGACAATCTTCCGGCTAAGCGTGGAGTTGAATTGCATGCCTACTGGCCGCGAACTGATTTTGCTAGCG CTAGGGATCAGGGCTTGAAAGGGAATCGTTTAGAAGAGTTTAATAAGATAGAGGATTCGATCGTTAAAGAAAAAGATCAA AGTAAACAACTACTTACTTGGATCTTCCCTTCGATCCTTTCCATCTCCTTGTTATTGAGCATCTGTTTCTATTTTATCTA TAGAAGAAAGACCGCTCCTTCAATCAAATATGCTAAAAATCATCGTCTCTATGAACCCCCAATGGAATTAGAGCCTATGG TTTTATCAGAAGCAGTCTACTCGACCTCCTTGGAGGAAGTGAGTCCCTTGGTCAAGGGAGCTGGAAAATTCACCTTTGAT CAACTTATTCAAGCTACCTTGCTAGATGTGATAGACCGTGGGAATGTCTCTATCATTTCAGAAGGAGATGCAGTTGGTTT GAGGCTAGTAAAAGAAGATGGTTTGTCAAGCTTTGAGAAAGACTGCCTAAATCTAGCTTTTTCAGGTAAAAAAGAAGAAA CTCTTTCCAATTTGTTTGCGGATTACAAGGTATCTGATAGTCTTTATCGTAGAGCCAAAGTTTCTGATGAAAAACGGATT CAAGCAAGAGGGCTTCAACTCAAATCTTCTTTTGAAGAGGTATTGAACCAGATGCAAGAAGGAGTGAGAAAACGAGTTTC CTTCTGGGGGCTCCCAGATTACTATCGTCCTTTAACTGGTTTGGAAAAGGCTTTGCAAGTGGGTATGGGTGTCTTGACTA TCTTGCCCCTATTTATCGGATTTGGTTTGTTCTTGTACAGTTTAGACGTTCATGGCTATCTTTACCTCCCTTTGCCAATA CTTGGTTTTCTAGGGTTAGTTTTGTCTGTTTTCTATTATTGGAAGCTTCGACTAGATAATCGTGATGGTGTTCTAAATGA AGCGGGAGCTGAGGTCTACTATCTCTGGACCAGTTTTGAAAATATGTTACGTGAGATTGCACGACTGGATAAGGCTGAAT TGGAAAGTATTGTTGTTTGGAATCGTCTCTTGGTCTATGCAACCTTATTTGGCTATGCGGACAAGGTTAGTCATTTGATG AAGGTTCATCAGATTCAAGTTGAAAATCCAGATATCAATCTCTATGTAGCTTATGGCTGGCACAGTATGTTTTATCATTC AAGCGCGCAAATGAGCCATTATGCTAGTGTCGCAAATACAGCAAGTACCTACTCCGTATCTTCTGGAAGTGGAAGTTCTG GCGGTGGCTTCTCTGGAGGCGGAGGTGGCGGCAGTATCGGAGCCTTTTAA
Upstream 100 bases:
>100_bases TCCTATTTTATCGAAAAATGCGTAATTTTTCAACATAAGTAAGCCTTTACTTACGAAAAAATGCTATAATGATAAGAAAG ATAAAAAGGGGGCTTAGTTG
Downstream 100 bases:
>100_bases AGAGAGCTACCATAGACTGAAAAAGTATGATATAATGGAAGATAGAAGAAAGACAAACTATAAGAAAAGTCAATAGTTTT ATCTAAACTATTTCTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPK IQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEVDLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRG DKGAEKLFFHTGKLFRERTVEKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVYSTSLEEVSPLVKGAGKFTFD QLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEKDCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRI QARGLQLKSSFEEVLNQMQEGVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVWNRLLVYATLFGYADKVSHLM KVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANTASTYSVSSGSGSSGGGFSGGGGGGSIGAF
Sequences:
>Translated_629_residues MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPK IQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEVDLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRG DKGAEKLFFHTGKLFRERTVEKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVYSTSLEEVSPLVKGAGKFTFD QLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEKDCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRI QARGLQLKSSFEEVLNQMQEGVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVWNRLLVYATLFGYADKVSHLM KVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANTASTYSVSSGSGSSGGGFSGGGGGGSIGAF >Mature_629_residues MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPK IQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEVDLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRG DKGAEKLFFHTGKLFRERTVEKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVYSTSLEEVSPLVKGAGKFTFD QLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEKDCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRI QARGLQLKSSFEEVLNQMQEGVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVWNRLLVYATLFGYADKVSHLM KVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANTASTYSVSSGSGSSGGGFSGGGGGGSIGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70990; Mature: 70990
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI CCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCEE VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV EEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV EEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHC EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ HHCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHH SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCHHHH DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGLQLKSSFEEVLNQMQE HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH GVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVW HHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHH NRLLVYATLFGYADKVSHLMKVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANT HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECHHHHHHCCCHHHHHHHHHHCC ASTYSVSSGSGSSGGGFSGGGGGGSIGAF CCEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI CCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCEE VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV EEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV EEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHC EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGLKGNRLEEFNKIEDSIVKEKDQ HHCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHH SKQLLTWIFPSILSISLLLSICFYFIYRRKTAPSIKYAKNHRLYEPPMELEPMVLSEAVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH STSLEEVSPLVKGAGKFTFDQLIQATLLDVIDRGNVSIISEGDAVGLRLVKEDGLSSFEK HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCHHHH DCLNLAFSGKKEETLSNLFADYKVSDSLYRRAKVSDEKRIQARGLQLKSSFEEVLNQMQE HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH GVRKRVSFWGLPDYYRPLTGLEKALQVGMGVLTILPLFIGFGLFLYSLDVHGYLYLPLPI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH LGFLGLVLSVFYYWKLRLDNRDGVLNEAGAEVYYLWTSFENMLREIARLDKAELESIVVW HHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHH NRLLVYATLFGYADKVSHLMKVHQIQVENPDINLYVAYGWHSMFYHSSAQMSHYASVANT HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECHHHHHHCCCHHHHHHHHHHCC ASTYSVSSGSGSSGGGFSGGGGGGSIGAF CCEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA