Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 116516483

GI number: 116516483

Start: 1021985

End: 1023418

Strand: Direct

Name: glgA

Synonym: SPD_1008

Alternate gene names: 116516483

Gene position: 1021985-1023418 (Clockwise)

Preceding gene: 116516261

Following gene: 116515367

Centisome position: 49.95

GC content: 40.73

Gene sequence:

>1434_bases
ATGAAAATTTTATTTGTAGCAGCAGAGGGTGCACCCTTTTCAAAAACAGGTGGTTTGGGAGACGTCATTGGCGCTCTTCC
AAAATCACTGGTAAAAGCTGGGCACGAAGTTGCAGTGATTTTACCCTACTATGATATGGTAGAGGCTAAATTTGGAAATC
AGATTGAAGATGTGCTTCATTTTGAGGTGAGCGTTGGTTGGCGCAGACAGTATTGTGGAATTAAGAAAACAGTATTAAAT
GGTGTAACCTTCTACTTTATTGACAATCAATATTATTTCTTCCGTGGTCATGTTTACGGTGATTTTGATGACGGAGAACG
CTTTGCCTTTTTCCAACTGGCTGCCATTGAGGCTATGGAAAGGATTGACTTTATTCCTGATCTTCTCCATGTTCATGACT
ACCATACAGCTATGATTCCTTTCTTGTTGAAGGAAAAATACCGTTGGATTCAAGCCTATGAGGACATTGAAACAGTTTTA
ACCATTCATAATTTAGAATTCCAAGGACAATTTTCAGAAGGAATGTTGGGTGATTTGTTTGGAGTTGGCTTTGAACGTTA
CGCTGATGGCACCCTTCGATGGAACAACTGTCTGAACTGGATGAAGGCAGGTATTCTCTATGCGAACCGTGTTTCAACCG
TTTCACCTAGCTATGCTCATGAAATTATGACTAGTCAGTTTGGATGTAATTTGGATCATATTCTTAAAATGGAGTCTGGT
AAAGTATCTGGTATCGTGAATGGGATTGATGCTGATCTTTATAATCCTCAGACGGATGCTCTTTTAGACTATCATTTCAA
TCAGGAAGATTTGTCTGGGAAAGCCAAAAATAAGGCAAAATTGCAAGAAAGAGTTGGCTTGCCTGTTAGAGCAGACGTTC
CACTGGTGGGAATTGTTTCTCGTTTGACACGTCAAAAAGGTTTTGATGTGGTGGTCGAAAGTCTTCACCATATCTTGCAA
GAAGATGTTCAGATTGTTCTTTTGGGAACTGGCGATCCAGCCTTTGAAGGAGCTTTCTCATGGTTTGCTCAGATTTACCC
AGACAAGCTATCAACAAATATCACTTTTGATGTCAAACTTGCTCAGGAAATCTACGCTGCTTGTGACCTCTTCCTCATGC
CAAGTCGTTTTGAACCGTGTGGCTTGTCTCAAATGATGGCTATGCGTTATGGAACCTTGCCATTGGTCCATGAAGTTGGA
GGCTTGCGAGATACAGTTCGCGCTTTCAATCCAATCGAAGGAAGCGGTACTGGCTTTAGCTTTGACAATCTATCTCCTTA
TTGGTTAAATTGGACTTTCCAAACAGCATTGGACTTGTATAGAAACCATCCAGACATTTGGAGAAACCTACAAAAACAAG
CTATGGAGAGTGACTTCTCATGGGATACAGCCTGCAAGTCATACCTTGACTTGTACCATAGTTTAGTTAATTAA

Upstream 100 bases:

>100_bases
ACAAAGGGGTTGAAGTTGAGCCTGGTGTTGTGATTCGAGGAACTGCAGAACATCCAGTTGTGGTTAAGAAAGGTGCTAAA
GTAACAGAGGATATTCATTC

Downstream 100 bases:

>100_bases
TAGATAAAATCGTATGATGACTTCATACGATTTTTAGGCTGTTTAGAGAGGAGAACTGATGTCTCAAGTAAAAGGCTTGT
GTGTTTTGGATGTAGATGGA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLN
GVTFYFIDNQYYFFRGHVYGDFDDGERFAFFQLAAIEAMERIDFIPDLLHVHDYHTAMIPFLLKEKYRWIQAYEDIETVL
TIHNLEFQGQFSEGMLGDLFGVGFERYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDHILKMESG
KVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQ
EDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVG
GLRDTVRAFNPIEGSGTGFSFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSYLDLYHSLVN

Sequences:

>Translated_477_residues
MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLN
GVTFYFIDNQYYFFRGHVYGDFDDGERFAFFQLAAIEAMERIDFIPDLLHVHDYHTAMIPFLLKEKYRWIQAYEDIETVL
TIHNLEFQGQFSEGMLGDLFGVGFERYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDHILKMESG
KVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQ
EDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVG
GLRDTVRAFNPIEGSGTGFSFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSYLDLYHSLVN
>Mature_477_residues
MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLN
GVTFYFIDNQYYFFRGHVYGDFDDGERFAFFQLAAIEAMERIDFIPDLLHVHDYHTAMIPFLLKEKYRWIQAYEDIETVL
TIHNLEFQGQFSEGMLGDLFGVGFERYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDHILKMESG
KVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQ
EDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVG
GLRDTVRAFNPIEGSGTGFSFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSYLDLYHSLVN

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=493, Percent_Identity=36.105476673428, Blast_Score=297, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_STRP2 (Q04KG5)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816483.1
- ProteinModelPortal:   Q04KG5
- SMR:   Q04KG5
- STRING:   Q04KG5
- EnsemblBacteria:   EBSTRT00000020670
- GeneID:   4443012
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1008
- eggNOG:   COG0297
- GeneTree:   EBGT00050000027459
- HOGENOM:   HBG596384
- OMA:   SIHNLLF
- ProtClustDB:   PRK00654
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 54168; Mature: 54168

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHHHHHE
FEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFRGHVYGDFDDGERFAFFQLAAIEAME
EHEECCHHHHHCCHHHHHHCCEEEEEECCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHH
RIDFIPDLLHVHDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHH
GVGFERYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDHILKMESG
HCCHHHHCCCCEEHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCHHHHEEECCC
KVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVS
CEEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
RLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKL
HHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCCEEEEEHH
AQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFS
HHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCCCCC
FDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSYLDLYHSLVN
CCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHHHHHE
FEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFRGHVYGDFDDGERFAFFQLAAIEAME
EHEECCHHHHHCCHHHHHHCCEEEEEECCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHH
RIDFIPDLLHVHDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHH
GVGFERYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDHILKMESG
HCCHHHHCCCCEEHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCHHHHEEECCC
KVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVS
CEEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
RLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKL
HHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCCEEEEEHH
AQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFS
HHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCCCCC
FDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSYLDLYHSLVN
CCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA