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The map label for this gene is insI1 [C]

Identifier: 116516434

GI number: 116516434

Start: 824611

End: 825486

Strand: Reverse

Name: insI1 [C]

Synonym: SPD_0807

Alternate gene names: 116516434

Gene position: 825486-824611 (Counterclockwise)

Preceding gene: 116515443

Following gene: 116515380

Centisome position: 40.34

GC content: 40.3

Gene sequence:

>876_bases
ATGCAAGACAATTATACTACAAAAGCCAAACATTTGACAATCGATAGCCGTCGCTTAATCGAAAGATGGAAAAAAGAAGG
AAAATCAAATAGAGAAATTGCCTCTCTACTTGGAAAAGCTCCTCAAACTATCCACACTGAAATCAAGCGTAGGACAGTCC
GAAAATGTCTTGGAAAAGGGCGCTTCAAAGAGGTTTATTCTGCCGACTATGCTCAACAGTCTTATGAAAATAATCGCAAG
CACTCGGTCAAGAAATCAAGCTTGACCAAGGAACTAAAGGAAAAGATTCTCCACTATCATAACCAAAAATTTTCGCCTGA
TAAGAAACAGGCTAGCACCAACTTTAAACCTGCTGGTCAATCCATCGAACAGCGGTCTGAAGCTATCAATCTTCGCTTGG
AGAATGGGTATTATGAGATTGATACGGTTCTACTTACGAGAGCGAAAAACTACTGCTTGCTTGTCTTGACGGATCGAAAG
AGTAGACATCAGATCATCCGATTGATTCCAAATAAAAGTGCTGAGGTGGTCAATCAGGCTCTAAAACTCATCTTAAAACA
ACACAAGATTCTTTCCATCACGGCAGATAATGGAACGGAATTCAATCGCTTGTTTGATGTATTTTCTGAGGAGCACATCT
ATTATGCGCACCCCTATGCCTCTTGGGAAAGGGGAACTAATGAGAATCACAACAGGCTCATTCGTAGATGGTTACCTAAG
GGAACCAAGAAAATGACTCCCAAAGAAGTCGCATTCATCGAAAAGTGGATTAACAACTATCCTAAAAAATGCTTGGACTA
CAAGTCACCCAGAGAAGACTTCTGGATGGCTAACTTGAACTTGAAATTTAGCGTCAGAAACAAATCACGAAATTGA

Upstream 100 bases:

>100_bases
AAAATTAGATGGTTCAATTAGCTGATAGCTCTTGTAGGCATAAGAAAACACCTCTGTGTTATACTTGTTGTTCAACCACA
AACACAAGAAAGGCACAGAG

Downstream 100 bases:

>100_bases
TTCAAATTTTGCAGGTCGTTTAAATATCCTGCGTGCGGGTGTTCTTGATGCTAACGATGGAATTATTTCCATTGCTGGTG
TGGTTATCGGAGTTGCCAGT

Product: IS1239, transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRRTVRKCLGKGRFKEVYSADYAQQSYENNRK
HSVKKSSLTKELKEKILHYHNQKFSPDKKQASTNFKPAGQSIEQRSEAINLRLENGYYEIDTVLLTRAKNYCLLVLTDRK
SRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTEFNRLFDVFSEEHIYYAHPYASWERGTNENHNRLIRRWLPK
GTKKMTPKEVAFIEKWINNYPKKCLDYKSPREDFWMANLNLKFSVRNKSRN

Sequences:

>Translated_291_residues
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRRTVRKCLGKGRFKEVYSADYAQQSYENNRK
HSVKKSSLTKELKEKILHYHNQKFSPDKKQASTNFKPAGQSIEQRSEAINLRLENGYYEIDTVLLTRAKNYCLLVLTDRK
SRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTEFNRLFDVFSEEHIYYAHPYASWERGTNENHNRLIRRWLPK
GTKKMTPKEVAFIEKWINNYPKKCLDYKSPREDFWMANLNLKFSVRNKSRN
>Mature_291_residues
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRRTVRKCLGKGRFKEVYSADYAQQSYENNRK
HSVKKSSLTKELKEKILHYHNQKFSPDKKQASTNFKPAGQSIEQRSEAINLRLENGYYEIDTVLLTRAKNYCLLVLTDRK
SRHQIIRLIPNKSAEVVNQALKLILKQHKILSITADNGTEFNRLFDVFSEEHIYYAHPYASWERGTNENHNRLIRRWLPK
GTKKMTPKEVAFIEKWINNYPKKCLDYKSPREDFWMANLNLKFSVRNKSRN

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=161, Percent_Identity=38.5093167701863, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787671, Length=161, Percent_Identity=38.5093167701863, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1786450, Length=161, Percent_Identity=38.5093167701863, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34426; Mature: 34426

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRRTVRKCLGKG
CCCCCCCCHHEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
RFKEVYSADYAQQSYENNRKHSVKKSSLTKELKEKILHYHNQKFSPDKKQASTNFKPAGQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCH
SIEQRSEAINLRLENGYYEIDTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQA
HHHHHHHHEEEEECCCEEEHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHH
LKLILKQHKILSITADNGTEFNRLFDVFSEEHIYYAHPYASWERGTNENHNRLIRRWLPK
HHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCC
GTKKMTPKEVAFIEKWINNYPKKCLDYKSPREDFWMANLNLKFSVRNKSRN
CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECEEEEEECCCCCC
>Mature Secondary Structure
MQDNYTTKAKHLTIDSRRLIERWKKEGKSNREIASLLGKAPQTIHTEIKRRTVRKCLGKG
CCCCCCCCHHEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
RFKEVYSADYAQQSYENNRKHSVKKSSLTKELKEKILHYHNQKFSPDKKQASTNFKPAGQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCH
SIEQRSEAINLRLENGYYEIDTVLLTRAKNYCLLVLTDRKSRHQIIRLIPNKSAEVVNQA
HHHHHHHHEEEEECCCEEEHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHH
LKLILKQHKILSITADNGTEFNRLFDVFSEEHIYYAHPYASWERGTNENHNRLIRRWLPK
HHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCC
GTKKMTPKEVAFIEKWINNYPKKCLDYKSPREDFWMANLNLKFSVRNKSRN
CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]