Click here to switch to the map view.

The map label for this gene is 116516415

Identifier: 116516415

GI number: 116516415

Start: 847401

End: 848048

Strand: Direct

Name: 116516415

Synonym: SPD_0831

Alternate gene names: NA

Gene position: 847401-848048 (Clockwise)

Preceding gene: 116517217

Following gene: 116516642

Centisome position: 41.42

GC content: 31.64

Gene sequence:

>648_bases
ATGGACTTTGAATATTTTTATAACAGAGAAGCGGAAAGATTTAACTTCTTAAAAGTACCGGAGATATTAGTTGATAGAGA
AGAATTTCGGGGCTTATCAGCAGAAGCAATTATCCTTTATTCCATACTTCTTAAACAGACAGGAATGTCATTTAAGAATA
ACTGGATAGACAAGGAAGGCAGAGTATTTATCTATTTTACTGTCGAAGAAATTATGAAAAGAAGAAATATCTCAAAGCCA
ACTGCCATAAAAACATTAGATGAGCTTGATGTAAAAAAAGGAATAGGACTGATCGAAAGAGTAAGGCTTGGACTTGGTAA
GCCGAACATCATTTATGTTAAAGACTTTATGAGTATATTTCAGGTAAAAGAAAATGACTTACAGAAGTCAAAAAACTTAA
CTTCAGAAGTAAAAGATTTTAACCTCAGAAGTAAAGAAAATGAACTTCAAGAGGTTAAGAACCTTGACTCTAACTATATA
GAGAATAATAAGAGTAAGTATAGTAAGAGAGAATATAGTTTTGGTGAAAACGGACTTGGAACATTTCAAAATGTGTTTTT
AGCTGCTGAAGATATATCGGATTTACAAATCATAATGAACTCACAGCTTGAGAATTACATTAGACTTTCTGCAAAACTAG
AATCCTAG

Upstream 100 bases:

>100_bases
TTTAACTTTAAAAAATTTCATAAAAATGGTTACCAAAGGCGATAGAAGAAAAACTATCGTCTTTTTCTTTGCAAATTTTT
AAGAAGGGAGGTGATCTTGC

Downstream 100 bases:

>100_bases
TTCATGATTGATAATACCAGCAATCAAATTCATTCGTAATCCGAAGCGTTTACGATGATTTTGATAGGTTGTTGAAAACA
TTTTAAACGTTTTTACTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Protein; Replication Initiator Protein; Replication Initiator; Replication-Associated Protein RepA; Replication Initiation Protein; Replication Initiator A Domain-Containing Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDFEYFYNREAERFNFLKVPEILVDREEFRGLSAEAIILYSILLKQTGMSFKNNWIDKEGRVFIYFTVEEIMKRRNISKP
TAIKTLDELDVKKGIGLIERVRLGLGKPNIIYVKDFMSIFQVKENDLQKSKNLTSEVKDFNLRSKENELQEVKNLDSNYI
ENNKSKYSKREYSFGENGLGTFQNVFLAAEDISDLQIIMNSQLENYIRLSAKLES

Sequences:

>Translated_215_residues
MDFEYFYNREAERFNFLKVPEILVDREEFRGLSAEAIILYSILLKQTGMSFKNNWIDKEGRVFIYFTVEEIMKRRNISKP
TAIKTLDELDVKKGIGLIERVRLGLGKPNIIYVKDFMSIFQVKENDLQKSKNLTSEVKDFNLRSKENELQEVKNLDSNYI
ENNKSKYSKREYSFGENGLGTFQNVFLAAEDISDLQIIMNSQLENYIRLSAKLES
>Mature_215_residues
MDFEYFYNREAERFNFLKVPEILVDREEFRGLSAEAIILYSILLKQTGMSFKNNWIDKEGRVFIYFTVEEIMKRRNISKP
TAIKTLDELDVKKGIGLIERVRLGLGKPNIIYVKDFMSIFQVKENDLQKSKNLTSEVKDFNLRSKENELQEVKNLDSNYI
ENNKSKYSKREYSFGENGLGTFQNVFLAAEDISDLQIIMNSQLENYIRLSAKLES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25231; Mature: 25231

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEYFYNREAERFNFLKVPEILVDREEFRGLSAEAIILYSILLKQTGMSFKNNWIDKEG
CCCHHHHCCCHHHCCCEECHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCC
RVFIYFTVEEIMKRRNISKPTAIKTLDELDVKKGIGLIERVRLGLGKPNIIYVKDFMSIF
CEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHH
QVKENDLQKSKNLTSEVKDFNLRSKENELQEVKNLDSNYIENNKSKYSKREYSFGENGLG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCH
TFQNVFLAAEDISDLQIIMNSQLENYIRLSAKLES
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFEYFYNREAERFNFLKVPEILVDREEFRGLSAEAIILYSILLKQTGMSFKNNWIDKEG
CCCHHHHCCCHHHCCCEECHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCC
RVFIYFTVEEIMKRRNISKPTAIKTLDELDVKKGIGLIERVRLGLGKPNIIYVKDFMSIF
CEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHH
QVKENDLQKSKNLTSEVKDFNLRSKENELQEVKNLDSNYIENNKSKYSKREYSFGENGLG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCH
TFQNVFLAAEDISDLQIIMNSQLENYIRLSAKLES
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA