Click here to switch to the map view.

The map label for this gene is 116516408

Identifier: 116516408

GI number: 116516408

Start: 1936750

End: 1937076

Strand: Reverse

Name: 116516408

Synonym: SPD_1968

Alternate gene names: NA

Gene position: 1937076-1936750 (Counterclockwise)

Preceding gene: 116515878

Following gene: 116515800

Centisome position: 94.67

GC content: 37.92

Gene sequence:

>327_bases
GTGATTTTATGGAGTTTCGATTTTGCAAATGATCATGCTCATGCATTTTTCATGGATAATGTTGAGTGGAGTCATGCAGA
TTCTTACTTTCTTAGCTTTGTTAGTGACGATGTTGAAGAACGTTACACAGAAAATGTCTATCTGGATAGCCTAAGTGTCA
AACAAAAATTTAAGTTTATTTTCGACTTCGGTGATGAATGGCGTTTTGAATGCCAAGTGCTGAGAGAAATCGAGACAGAG
GACGAAGAAGCTTATCTCGTACGTTCGGTTGGAACGTCGCCAGAACAATATCCAGATTATGATGGTTTTGACTATGAAGA
ATGGTAA

Upstream 100 bases:

>100_bases
CAGCATCTGTAGAAGCTTGGATCATTTCCGTCAAATTAAAAAAGGTTGCTACCGACATATATAGATTCCAAAAACAAAAA
CGTTAGCGGAACTAGCAGAT

Downstream 100 bases:

>100_bases
AATTGAAATCAGTCTGTGTAGGCTTAGTATTTCAATAGACTTCCTGCAAAACTAGAATCCTAGTTCATGATTGATAATAC
CAGCACTCAAATTCATTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MILWSFDFANDHAHAFFMDNVEWSHADSYFLSFVSDDVEERYTENVYLDSLSVKQKFKFIFDFGDEWRFECQVLREIETE
DEEAYLVRSVGTSPEQYPDYDGFDYEEW

Sequences:

>Translated_108_residues
MILWSFDFANDHAHAFFMDNVEWSHADSYFLSFVSDDVEERYTENVYLDSLSVKQKFKFIFDFGDEWRFECQVLREIETE
DEEAYLVRSVGTSPEQYPDYDGFDYEEW
>Mature_108_residues
MILWSFDFANDHAHAFFMDNVEWSHADSYFLSFVSDDVEERYTENVYLDSLSVKQKFKFIFDFGDEWRFECQVLREIETE
DEEAYLVRSVGTSPEQYPDYDGFDYEEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13107; Mature: 13107

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILWSFDFANDHAHAFFMDNVEWSHADSYFLSFVSDDVEERYTENVYLDSLSVKQKFKFI
CEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHEE
FDFGDEWRFECQVLREIETEDEEAYLVRSVGTSPEQYPDYDGFDYEEW
EECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILWSFDFANDHAHAFFMDNVEWSHADSYFLSFVSDDVEERYTENVYLDSLSVKQKFKFI
CEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHEE
FDFGDEWRFECQVLREIETEDEEAYLVRSVGTSPEQYPDYDGFDYEEW
EECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA